RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 FAM105AQ9NUU6 356 aa26.9■■□□□ 1.9
USP47-205ENST00000525257 DZANK1Q9NVP4 752 aa26.9■■□□□ 1.9
USP47-205ENST00000525257 MAFO75444 373 aaPredicted RBP26.89■■□□□ 1.9
USP47-205ENST00000525257 SKIP12755 728 aa26.89■■□□□ 1.9
USP47-205ENST00000525257 EVCP57679 992 aa26.89■■□□□ 1.9
USP47-205ENST00000525257 RNASELQ05823 741 aaKnown RBP26.89■■□□□ 1.9
USP47-205ENST00000525257 NOMO2Q5JPE7 1267 aa26.89■■□□□ 1.9
USP47-205ENST00000525257 PLA2G4FQ68DD2 849 aa26.89■■□□□ 1.9
USP47-205ENST00000525257 DDX53Q86TM3 631 aaKnown RBP26.89■■□□□ 1.9
USP47-205ENST00000525257 UBALD2Q8IYN6 164 aa26.89■■□□□ 1.9
USP47-205ENST00000525257 BLIDQ8IZY5 108 aa26.89■■□□□ 1.9
USP47-205ENST00000525257 ETNPPLQ8TBG4 499 aa26.89■■□□□ 1.9
USP47-205ENST00000525257 RSPH1Q8WYR4 309 aa26.89■■□□□ 1.9
USP47-205ENST00000525257 ATOH1Q92858 354 aaPredicted RBP26.89■■□□□ 1.9
USP47-205ENST00000525257 ASGR2P07307 311 aa26.88■■□□□ 1.89
USP47-205ENST00000525257 GALTP07902 379 aa26.88■■□□□ 1.89
USP47-205ENST00000525257 CTSAP10619 480 aa26.88■■□□□ 1.89
USP47-205ENST00000525257 POLGP54098 1239 aaPredicted RBP26.88■■□□□ 1.89
USP47-205ENST00000525257 KIAA1841Q6NSI8 718 aa26.88■■□□□ 1.89
USP47-205ENST00000525257 ANO5Q75V66 913 aa26.88■■□□□ 1.89
USP47-205ENST00000525257 TDRD5Q8NAT2 981 aaKnown RBP26.88■■□□□ 1.89
USP47-205ENST00000525257 DNAJB4Q9UDY4 337 aa26.88■■□□□ 1.89
USP47-205ENST00000525257 MYO15AQ9UKN7 3530 aa26.87■■□□□ 1.89
USP47-205ENST00000525257 H0Y858 1186 aa26.87■■□□□ 1.89
USP47-205ENST00000525257 M0R2N6 131 aa26.87■■□□□ 1.89
USP47-205ENST00000525257 RAB27AP51159 221 aa26.87■■□□□ 1.89
USP47-205ENST00000525257 TOB2Q14106 344 aaPredicted RBP26.87■■□□□ 1.89
USP47-205ENST00000525257 MBOAT7Q96N66 472 aa26.87■■□□□ 1.89
USP47-205ENST00000525257 DDX25Q9UHL0 483 aaKnown RBP26.87■■□□□ 1.89
USP47-205ENST00000525257 DBR1Q9UK59 544 aaKnown RBP26.87■■□□□ 1.89
USP47-205ENST00000525257 IRAK3Q9Y616 596 aa26.87■■□□□ 1.89
USP47-205ENST00000525257 CARNS1A5YM72 827 aa26.86■■□□□ 1.89
USP47-205ENST00000525257 ST18O60284 1047 aa26.86■■□□□ 1.89
USP47-205ENST00000525257 B4GALT3O60512 393 aa26.86■■□□□ 1.89
USP47-205ENST00000525257 GFRA3O60609 400 aa26.86■■□□□ 1.89
USP47-205ENST00000525257 OFD1O75665 1012 aa26.86■■□□□ 1.89
USP47-205ENST00000525257 DEXIO95424 95 aa26.86■■□□□ 1.89
USP47-205ENST00000525257 SLC11A1P49279 550 aa26.86■■□□□ 1.89
USP47-205ENST00000525257 PSMC5P62195 406 aa26.86■■□□□ 1.89
USP47-205ENST00000525257 GIT2Q14161 759 aa26.86■■□□□ 1.89
USP47-205ENST00000525257 ATAT1Q5SQI0 421 aa26.86■■□□□ 1.89
USP47-205ENST00000525257 FEZF2Q8TBJ5 459 aa26.86■■□□□ 1.89
USP47-205ENST00000525257 SLC22A17Q8WUG5 538 aa26.86■■□□□ 1.89
USP47-205ENST00000525257 AIFM3Q96NN9 605 aa26.86■■□□□ 1.89
USP47-205ENST00000525257 VN1R3Q9BXE9 311 aa26.86■■□□□ 1.89
USP47-205ENST00000525257 IRF2BPLQ9H1B7 796 aa26.86■■□□□ 1.89
USP47-205ENST00000525257 CPLX1O14810 134 aa26.85■■□□□ 1.89
USP47-205ENST00000525257 SLC37A4O43826 429 aa26.85■■□□□ 1.89
USP47-205ENST00000525257 NONOQ15233 471 aaKnown RBP eCLIP26.85■■□□□ 1.89
USP47-205ENST00000525257 NPY5RQ15761 445 aa26.85■■□□□ 1.89
USP47-205ENST00000525257 INF2Q27J81 1249 aa26.85■■□□□ 1.89
USP47-205ENST00000525257 MOXD1Q6UVY6 613 aa26.85■■□□□ 1.89
USP47-205ENST00000525257 TMC5Q6UXY8 1006 aa26.85■■□□□ 1.89
USP47-205ENST00000525257 RUFY3Q7L099 469 aa26.85■■□□□ 1.89
USP47-205ENST00000525257 CABP7Q86V35 215 aa26.85■■□□□ 1.89
USP47-205ENST00000525257 DAGLBQ8NCG7 672 aa26.85■■□□□ 1.89
USP47-205ENST00000525257 JPH2Q9BR39 696 aaPredicted RBP26.85■■□□□ 1.89
USP47-205ENST00000525257 LARP6Q9BRS8 491 aaKnown RBP26.85■■□□□ 1.89
USP47-205ENST00000525257 LIMD1Q9UGP4 676 aa26.85■■□□□ 1.89
USP47-205ENST00000525257 DENND4AQ7Z401 1863 aa26.85■■□□□ 1.89
USP47-205ENST00000525257 EML1O00423 815 aa26.84■■□□□ 1.89
USP47-205ENST00000525257 ZNF623O75123 536 aa26.84■■□□□ 1.89
USP47-205ENST00000525257 REC8O95072 547 aa26.84■■□□□ 1.89
USP47-205ENST00000525257 NPEPPSP55786 919 aa26.84■■□□□ 1.89
USP47-205ENST00000525257 PTPN14Q15678 1187 aa26.84■■□□□ 1.89
USP47-205ENST00000525257 ZNF280BQ86YH2 543 aa26.84■■□□□ 1.89
USP47-205ENST00000525257 ZDHHC14Q8IZN3 488 aa26.84■■□□□ 1.89
USP47-205ENST00000525257 PGBD4Q96DM1 585 aa26.84■■□□□ 1.89
USP47-205ENST00000525257 IFT122Q9HBG6 1241 aa26.84■■□□□ 1.89
USP47-205ENST00000525257 CYP26B1Q9NR63 512 aa26.84■■□□□ 1.89
USP47-205ENST00000525257 AGPAT5Q9NUQ2 364 aa26.84■■□□□ 1.89
USP47-205ENST00000525257 PCDHB2Q9Y5E7 798 aa26.84■■□□□ 1.89
USP47-205ENST00000525257 COL4A3BPQ9Y5P4 624 aa26.84■■□□□ 1.89
USP47-205ENST00000525257 CFAP54Q96N23 3096 aa26.84■■□□□ 1.89
USP47-205ENST00000525257 SPDYE4A6NLX3 237 aa26.83■■□□□ 1.89
USP47-205ENST00000525257 GALR2O43603 387 aaPredicted RBP26.83■■□□□ 1.89
USP47-205ENST00000525257 SSBP05455 408 aaKnown RBP eCLIP26.83■■□□□ 1.89
USP47-205ENST00000525257 STK3Q13188 491 aa26.83■■□□□ 1.89
USP47-205ENST00000525257 LETM2Q2VYF4 491 aa26.83■■□□□ 1.89
USP47-205ENST00000525257 TMEM105Q8N8V8 129 aa26.83■■□□□ 1.89
USP47-205ENST00000525257 URGCPQ8TCY9 931 aa26.83■■□□□ 1.89
USP47-205ENST00000525257 PLXNA3P51805 1871 aa26.83■■□□□ 1.88
USP47-205ENST00000525257 QARSP47897 775 aaKnown RBP26.82■■□□□ 1.88
USP47-205ENST00000525257 NUBP1P53384 320 aa26.82■■□□□ 1.88
USP47-205ENST00000525257 AGMOQ6ZNB7 445 aa26.82■■□□□ 1.88
USP47-205ENST00000525257 KRT25Q7Z3Z0 450 aa26.82■■□□□ 1.88
USP47-205ENST00000525257 ZNF579Q8NAF0 562 aaKnown RBP26.82■■□□□ 1.88
USP47-205ENST00000525257 SLC7A3Q8WY07 619 aa26.82■■□□□ 1.88
USP47-205ENST00000525257 SLKQ9H2G2 1235 aaPredicted RBP26.82■■□□□ 1.88
USP47-205ENST00000525257 ZSWIM6Q9HCJ5 1215 aa26.82■■□□□ 1.88
USP47-205ENST00000525257 BMP2KQ9NSY1 1161 aaPredicted RBP26.82■■□□□ 1.88
USP47-205ENST00000525257 VAV3Q9UKW4 847 aa26.82■■□□□ 1.88
USP47-205ENST00000525257 USTQ9Y2C2 406 aa26.82■■□□□ 1.88
USP47-205ENST00000525257 DDHD2O94830 711 aa26.81■■□□□ 1.88
USP47-205ENST00000525257 AFF1P51825 1210 aaKnown RBP26.81■■□□□ 1.88
USP47-205ENST00000525257 GALNT17Q6IS24 598 aa26.81■■□□□ 1.88
USP47-205ENST00000525257 PPFIBP1Q86W92 1011 aa26.81■■□□□ 1.88
USP47-205ENST00000525257 PLCD3Q8N3E9 789 aa26.81■■□□□ 1.88
USP47-205ENST00000525257 TMEM143Q96AN5 459 aa26.81■■□□□ 1.88
USP47-205ENST00000525257 CEP170P1Q96L14 293 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms