RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 H3BQV1 296 aa13.99□□□□□ -0.17
SMCO4-202ENST00000525141 DKC1O60832 514 aaKnown RBP eCLIP13.99□□□□□ -0.17
SMCO4-202ENST00000525141 ZNF623O75123 536 aa13.99□□□□□ -0.17
SMCO4-202ENST00000525141 TBX10O75333 385 aa13.99□□□□□ -0.17
SMCO4-202ENST00000525141 OFD1O75665 1012 aa13.99□□□□□ -0.17
SMCO4-202ENST00000525141 GLP2RO95838 553 aa13.99□□□□□ -0.17
SMCO4-202ENST00000525141 ATP2B1P20020 1258 aa13.99□□□□□ -0.17
SMCO4-202ENST00000525141 RFC5P40937 340 aa13.99□□□□□ -0.17
SMCO4-202ENST00000525141 NRIP1P48552 1158 aa13.99□□□□□ -0.17
SMCO4-202ENST00000525141 AFF1P51825 1210 aaKnown RBP13.99□□□□□ -0.17
SMCO4-202ENST00000525141 GNL2Q13823 731 aaKnown RBP13.99□□□□□ -0.17
SMCO4-202ENST00000525141 ZNF174Q15697 407 aa13.99□□□□□ -0.17
SMCO4-202ENST00000525141 CLUL1Q15846 466 aa13.99□□□□□ -0.17
SMCO4-202ENST00000525141 LONRF3Q496Y0 759 aa13.99□□□□□ -0.17
SMCO4-202ENST00000525141 SPOUT1Q5T280 376 aaKnown RBP13.99□□□□□ -0.17
SMCO4-202ENST00000525141 KCNT2Q6UVM3 1135 aa13.99□□□□□ -0.17
SMCO4-202ENST00000525141 OTUD6AQ7L8S5 288 aa13.99□□□□□ -0.17
SMCO4-202ENST00000525141 MRPL10Q7Z7H8 261 aaKnown RBP13.99□□□□□ -0.17
SMCO4-202ENST00000525141 FERMT3Q86UX7 667 aa13.99□□□□□ -0.17
SMCO4-202ENST00000525141 RNF169Q8NCN4 708 aa13.99□□□□□ -0.17
SMCO4-202ENST00000525141 VN1R2Q8NFZ6 395 aa13.99□□□□□ -0.17
SMCO4-202ENST00000525141 NLRP4Q96MN2 994 aa13.99□□□□□ -0.17
SMCO4-202ENST00000525141 SCLT1Q96NL6 688 aa13.99□□□□□ -0.17
SMCO4-202ENST00000525141 INO80BQ9C086 356 aaPredicted RBP13.99□□□□□ -0.17
SMCO4-202ENST00000525141 PPME1Q9Y570 386 aa13.99□□□□□ -0.17
SMCO4-202ENST00000525141 COL4A3BPQ9Y5P4 624 aa13.99□□□□□ -0.17
SMCO4-202ENST00000525141 C19orf67A6NJJ6 358 aa13.98□□□□□ -0.17
SMCO4-202ENST00000525141 PI4K2BG5E9Z4 385 aa13.98□□□□□ -0.17
SMCO4-202ENST00000525141 MBTPS2O43462 519 aa13.98□□□□□ -0.17
SMCO4-202ENST00000525141 ARL2P36404 184 aa13.98□□□□□ -0.17
SMCO4-202ENST00000525141 TRAPPC10P48553 1259 aa13.98□□□□□ -0.17
SMCO4-202ENST00000525141 UBE3AQ05086 875 aa13.98□□□□□ -0.17
SMCO4-202ENST00000525141 ORC2Q13416 577 aaPredicted RBP13.98□□□□□ -0.17
SMCO4-202ENST00000525141 KCNC3Q14003 757 aa13.98□□□□□ -0.17
SMCO4-202ENST00000525141 PUS10Q3MIT2 529 aaKnown RBP13.98□□□□□ -0.17
SMCO4-202ENST00000525141 CATSPER3Q86XQ3 398 aa13.98□□□□□ -0.17
SMCO4-202ENST00000525141 GJD3Q8N144 294 aa13.98□□□□□ -0.17
SMCO4-202ENST00000525141 EFHBQ8N7U6 833 aa13.98□□□□□ -0.17
SMCO4-202ENST00000525141 PIGOQ8TEQ8 1089 aa13.98□□□□□ -0.17
SMCO4-202ENST00000525141 SLC7A3Q8WY07 619 aa13.98□□□□□ -0.17
SMCO4-202ENST00000525141 MRPS27Q92552 414 aaKnown RBP13.98□□□□□ -0.17
SMCO4-202ENST00000525141 JPH2Q9BR39 696 aaPredicted RBP13.98□□□□□ -0.17
SMCO4-202ENST00000525141 C11orf16Q9NQ32 467 aa13.98□□□□□ -0.17
SMCO4-202ENST00000525141 AAASQ9NRG9 546 aa13.98□□□□□ -0.17
SMCO4-202ENST00000525141 ANKEF1Q9NU02 776 aa13.98□□□□□ -0.17
SMCO4-202ENST00000525141 DACT1Q9NYF0 836 aa13.98□□□□□ -0.17
SMCO4-202ENST00000525141 RAPGEFL1Q9UHV5 662 aa13.98□□□□□ -0.17
SMCO4-202ENST00000525141 C5orf42Q9H799 3197 aa13.98□□□□□ -0.17
SMCO4-202ENST00000525141 POTEMA6NI47 508 aa13.97□□□□□ -0.17
SMCO4-202ENST00000525141 HIDE1A8MVS5 230 aa13.97□□□□□ -0.17
SMCO4-202ENST00000525141 NT5C1B-RDH14C9J2C7 533 aa13.97□□□□□ -0.17
SMCO4-202ENST00000525141 ASAP2O43150 1006 aa13.97□□□□□ -0.17
SMCO4-202ENST00000525141 HOXA2O43364 376 aa13.97□□□□□ -0.17
SMCO4-202ENST00000525141 B4GALT3O60512 393 aa13.97□□□□□ -0.17
SMCO4-202ENST00000525141 NEMFO60524 1076 aa13.97□□□□□ -0.17
SMCO4-202ENST00000525141 MED24O75448 989 aa13.97□□□□□ -0.17
SMCO4-202ENST00000525141 XRCC6P12956 609 aaKnown RBP eCLIP13.97□□□□□ -0.17
SMCO4-202ENST00000525141 PDIA4P13667 645 aaKnown RBP13.97□□□□□ -0.17
SMCO4-202ENST00000525141 LAG3P18627 525 aa13.97□□□□□ -0.17
SMCO4-202ENST00000525141 MCM7P33993 719 aa13.97□□□□□ -0.17
SMCO4-202ENST00000525141 TOB1P50616 345 aaPredicted RBP13.97□□□□□ -0.17
SMCO4-202ENST00000525141 POLGP54098 1239 aaPredicted RBP13.97□□□□□ -0.17
SMCO4-202ENST00000525141 EMC2Q15006 297 aa13.97□□□□□ -0.17
SMCO4-202ENST00000525141 AGMOQ6ZNB7 445 aa13.97□□□□□ -0.17
SMCO4-202ENST00000525141 CATSPER4Q7RTX7 472 aa13.97□□□□□ -0.17
SMCO4-202ENST00000525141 SRGAP1Q7Z6B7 1085 aa13.97□□□□□ -0.17
SMCO4-202ENST00000525141 EXOC8Q8IYI6 725 aa13.97□□□□□ -0.17
SMCO4-202ENST00000525141 THNSL1Q8IYQ7 743 aa13.97□□□□□ -0.17
SMCO4-202ENST00000525141 SLC39A11Q8N1S5 342 aa13.97□□□□□ -0.17
SMCO4-202ENST00000525141 ASAP3Q8TDY4 903 aa13.97□□□□□ -0.17
SMCO4-202ENST00000525141 MICAL1Q8TDZ2 1067 aa13.97□□□□□ -0.17
SMCO4-202ENST00000525141 PSPC1Q8WXF1 523 aaKnown RBP13.97□□□□□ -0.17
SMCO4-202ENST00000525141 NRDE2Q9H7Z3 1164 aa13.97□□□□□ -0.17
SMCO4-202ENST00000525141 TLR9Q9NR96 1032 aa13.97□□□□□ -0.17
SMCO4-202ENST00000525141 AGPAT5Q9NUQ2 364 aa13.97□□□□□ -0.17
SMCO4-202ENST00000525141 FAM105AQ9NUU6 356 aa13.97□□□□□ -0.17
SMCO4-202ENST00000525141 LZTS1Q9Y250 596 aa13.97□□□□□ -0.17
SMCO4-202ENST00000525141 EYA4O95677 639 aa13.96□□□□□ -0.17
SMCO4-202ENST00000525141 PRR29P0C7W0 189 aa13.96□□□□□ -0.17
SMCO4-202ENST00000525141 SFPQP23246 707 aaKnown RBP eCLIP13.96□□□□□ -0.17
SMCO4-202ENST00000525141 TECP42680 631 aa13.96□□□□□ -0.17
SMCO4-202ENST00000525141 RARRES1P49788 294 aa13.96□□□□□ -0.17
SMCO4-202ENST00000525141 BCAR1P56945 870 aa13.96□□□□□ -0.17
SMCO4-202ENST00000525141 PTENP60484 403 aa13.96□□□□□ -0.17
SMCO4-202ENST00000525141 NBR1Q14596 966 aa13.96□□□□□ -0.17
SMCO4-202ENST00000525141 SMAD2Q15796 467 aaKnown RBP13.96□□□□□ -0.17
SMCO4-202ENST00000525141 ECM1Q16610 540 aa13.96□□□□□ -0.17
SMCO4-202ENST00000525141 AMHR2Q16671 573 aa13.96□□□□□ -0.17
SMCO4-202ENST00000525141 DUSP6Q16828 381 aa13.96□□□□□ -0.17
SMCO4-202ENST00000525141 MCTP1Q6DN14 999 aa13.96□□□□□ -0.17
SMCO4-202ENST00000525141 TWF2Q6IBS0 349 aaKnown RBP13.96□□□□□ -0.17
SMCO4-202ENST00000525141 TMEM173Q86WV6 379 aaPredicted RBP13.96□□□□□ -0.17
SMCO4-202ENST00000525141 ZNF280BQ86YH2 543 aa13.96□□□□□ -0.17
SMCO4-202ENST00000525141 IFNLR1Q8IU57 520 aaPredicted RBP13.96□□□□□ -0.17
SMCO4-202ENST00000525141 RNF149Q8NC42 400 aa13.96□□□□□ -0.17
SMCO4-202ENST00000525141 SMG8Q8ND04 991 aaKnown RBP13.96□□□□□ -0.17
SMCO4-202ENST00000525141 BCL7CQ8WUZ0 217 aaPredicted RBP13.96□□□□□ -0.17
SMCO4-202ENST00000525141 ZNF558Q96NG5 402 aa13.96□□□□□ -0.17
SMCO4-202ENST00000525141 MTRQ99707 1265 aa13.96□□□□□ -0.17
SMCO4-202ENST00000525141 TLE6Q9H808 572 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms