RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 TLR9Q9NR96 1032 aa20.66■□□□□ 0.9
CAPN1-203ENST00000525013 AGPAT5Q9NUQ2 364 aa20.66■□□□□ 0.9
CAPN1-203ENST00000525013 FAM105AQ9NUU6 356 aa20.66■□□□□ 0.9
CAPN1-203ENST00000525013 PCDHGC5Q9Y5F6 944 aa20.66■□□□□ 0.9
CAPN1-203ENST00000525013 LTBRP36941 435 aa20.65■□□□□ 0.9
CAPN1-203ENST00000525013 PBX3P40426 434 aa20.65■□□□□ 0.9
CAPN1-203ENST00000525013 TRAPPC10P48553 1259 aa20.65■□□□□ 0.9
CAPN1-203ENST00000525013 RARRES1P49788 294 aa20.65■□□□□ 0.9
CAPN1-203ENST00000525013 RAB27AP51159 221 aa20.65■□□□□ 0.9
CAPN1-203ENST00000525013 TFDP1Q14186 410 aa20.65■□□□□ 0.9
CAPN1-203ENST00000525013 NBR1Q14596 966 aa20.65■□□□□ 0.9
CAPN1-203ENST00000525013 CLUL1Q15846 466 aa20.65■□□□□ 0.9
CAPN1-203ENST00000525013 ADGRD2Q7Z7M1 963 aa20.65■□□□□ 0.9
CAPN1-203ENST00000525013 ERMNQ8TAM6 284 aa20.65■□□□□ 0.9
CAPN1-203ENST00000525013 MRPL9Q9BYD2 267 aaKnown RBP20.65■□□□□ 0.9
CAPN1-203ENST00000525013 TUFT1Q9NNX1 390 aa20.65■□□□□ 0.9
CAPN1-203ENST00000525013 PUF60Q9UHX1 559 aaKnown RBP20.65■□□□□ 0.9
CAPN1-203ENST00000525013 GRXCR2A6NFK2 248 aa20.64■□□□□ 0.89
CAPN1-203ENST00000525013 LINC01565O15544 149 aa20.64■□□□□ 0.89
CAPN1-203ENST00000525013 USO1O60763 962 aaKnown RBP20.64■□□□□ 0.89
CAPN1-203ENST00000525013 MED24O75448 989 aa20.64■□□□□ 0.89
CAPN1-203ENST00000525013 ERLIN2O94905 339 aa20.64■□□□□ 0.89
CAPN1-203ENST00000525013 SPATA31C1P0DKV0 1188 aa20.64■□□□□ 0.89
CAPN1-203ENST00000525013 XRCC6P12956 609 aaKnown RBP eCLIP20.64■□□□□ 0.89
CAPN1-203ENST00000525013 IL9P15248 144 aa20.64■□□□□ 0.89
CAPN1-203ENST00000525013 NRIP1P48552 1158 aa20.64■□□□□ 0.89
CAPN1-203ENST00000525013 DLX2Q07687 328 aaPredicted RBP20.64■□□□□ 0.89
CAPN1-203ENST00000525013 CTC1Q2NKJ3 1217 aa20.64■□□□□ 0.89
CAPN1-203ENST00000525013 GLB1LQ6UWU2 654 aa20.64■□□□□ 0.89
CAPN1-203ENST00000525013 CATSPER3Q86XQ3 398 aa20.64■□□□□ 0.89
CAPN1-203ENST00000525013 TMX3Q96JJ7 454 aa20.64■□□□□ 0.89
CAPN1-203ENST00000525013 TLE6Q9H808 572 aa20.64■□□□□ 0.89
CAPN1-203ENST00000525013 SPG21Q9NZD8 308 aa20.64■□□□□ 0.89
CAPN1-203ENST00000525013 FAM50BQ9Y247 325 aa20.64■□□□□ 0.89
CAPN1-203ENST00000525013 INPP5FQ9Y2H2 1132 aa20.64■□□□□ 0.89
CAPN1-203ENST00000525013 PCDHB2Q9Y5E7 798 aa20.64■□□□□ 0.89
CAPN1-203ENST00000525013 ZNF623O75123 536 aa20.63■□□□□ 0.89
CAPN1-203ENST00000525013 U2AF2P26368 475 aaKnown RBP eCLIP20.63■□□□□ 0.89
CAPN1-203ENST00000525013 PPM1AP35813 382 aa20.63■□□□□ 0.89
CAPN1-203ENST00000525013 NDUFV1P49821 464 aa20.63■□□□□ 0.89
CAPN1-203ENST00000525013 PTENP60484 403 aa20.63■□□□□ 0.89
CAPN1-203ENST00000525013 ERVFC1P60507 584 aa20.63■□□□□ 0.89
CAPN1-203ENST00000525013 KRT17Q04695 432 aa20.63■□□□□ 0.89
CAPN1-203ENST00000525013 MCTP1Q6DN14 999 aa20.63■□□□□ 0.89
CAPN1-203ENST00000525013 MAEAQ7L5Y9 396 aa20.63■□□□□ 0.89
CAPN1-203ENST00000525013 ASAP3Q8TDY4 903 aa20.63■□□□□ 0.89
CAPN1-203ENST00000525013 PGBD4Q96DM1 585 aa20.63■□□□□ 0.89
CAPN1-203ENST00000525013 NACC1Q96RE7 527 aa20.63■□□□□ 0.89
CAPN1-203ENST00000525013 POLR3CQ9BUI4 534 aaPredicted RBP20.63■□□□□ 0.89
CAPN1-203ENST00000525013 MEIS3P2A8K0S8 358 aa20.62■□□□□ 0.89
CAPN1-203ENST00000525013 INO80B-WBP1J3KQ70 363 aa20.62■□□□□ 0.89
CAPN1-203ENST00000525013 CD2BP2O95400 341 aaKnown RBP20.62■□□□□ 0.89
CAPN1-203ENST00000525013 HOXA11P31270 313 aaPredicted RBP20.62■□□□□ 0.89
CAPN1-203ENST00000525013 ARL2P36404 184 aa20.62■□□□□ 0.89
CAPN1-203ENST00000525013 ALDH7A1P49419 539 aaKnown RBP20.62■□□□□ 0.89
CAPN1-203ENST00000525013 PLCB3Q01970 1234 aa20.62■□□□□ 0.89
CAPN1-203ENST00000525013 NCBP1Q09161 790 aaKnown RBP20.62■□□□□ 0.89
CAPN1-203ENST00000525013 ADAM15Q13444 863 aa20.62■□□□□ 0.89
CAPN1-203ENST00000525013 POTEGQ6S5H5 508 aa20.62■□□□□ 0.89
CAPN1-203ENST00000525013 MRPS27Q92552 414 aaKnown RBP20.62■□□□□ 0.89
CAPN1-203ENST00000525013 POLR3FQ9H1D9 316 aaPredicted RBP20.62■□□□□ 0.89
CAPN1-203ENST00000525013 ENTPD7Q9NQZ7 604 aa20.62■□□□□ 0.89
CAPN1-203ENST00000525013 LZTS1Q9Y250 596 aa20.62■□□□□ 0.89
CAPN1-203ENST00000525013 PER2O15055 1255 aa20.61■□□□□ 0.89
CAPN1-203ENST00000525013 ZC3H11AO75152 810 aaKnown RBP eCLIP20.61■□□□□ 0.89
CAPN1-203ENST00000525013 TBX10O75333 385 aa20.61■□□□□ 0.89
CAPN1-203ENST00000525013 RPA1P27694 616 aa20.61■□□□□ 0.89
CAPN1-203ENST00000525013 TOB1P50616 345 aaPredicted RBP20.61■□□□□ 0.89
CAPN1-203ENST00000525013 BCAR1P56945 870 aa20.61■□□□□ 0.89
CAPN1-203ENST00000525013 RNASELQ05823 741 aaKnown RBP20.61■□□□□ 0.89
CAPN1-203ENST00000525013 CAPSQ13938 189 aa20.61■□□□□ 0.89
CAPN1-203ENST00000525013 NOMO2Q5JPE7 1267 aa20.61■□□□□ 0.89
CAPN1-203ENST00000525013 PLPP4Q5VZY2 271 aa20.61■□□□□ 0.89
CAPN1-203ENST00000525013 PDE12Q6L8Q7 609 aaKnown RBP20.61■□□□□ 0.89
CAPN1-203ENST00000525013 FAM178BQ8IXR5 827 aa20.61■□□□□ 0.89
CAPN1-203ENST00000525013 EFHBQ8N7U6 833 aa20.61■□□□□ 0.89
CAPN1-203ENST00000525013 C4orf32Q8N8J7 132 aa20.61■□□□□ 0.89
CAPN1-203ENST00000525013 TBC1D32Q96NH3 1257 aa20.61■□□□□ 0.89
CAPN1-203ENST00000525013 TCF25Q9BQ70 676 aa20.61■□□□□ 0.89
CAPN1-203ENST00000525013 DBR1Q9UK59 544 aaKnown RBP20.61■□□□□ 0.89
CAPN1-203ENST00000525013 ARHGEF35A5YM69 484 aa20.6■□□□□ 0.89
CAPN1-203ENST00000525013 NT5C1B-RDH14C9J2C7 533 aa20.6■□□□□ 0.89
CAPN1-203ENST00000525013 OFD1O75665 1012 aa20.6■□□□□ 0.89
CAPN1-203ENST00000525013 GLRA2P23416 452 aa20.6■□□□□ 0.89
CAPN1-203ENST00000525013 GJB2P29033 226 aa20.6■□□□□ 0.89
CAPN1-203ENST00000525013 SSTR3P32745 418 aaPredicted RBP20.6■□□□□ 0.89
CAPN1-203ENST00000525013 CCT6AP40227 531 aaKnown RBP20.6■□□□□ 0.89
CAPN1-203ENST00000525013 MCM2P49736 904 aa20.6■□□□□ 0.89
CAPN1-203ENST00000525013 PTGDRQ13258 359 aa20.6■□□□□ 0.89
CAPN1-203ENST00000525013 PCBP1Q15365 356 aaKnown RBP eCLIP20.6■□□□□ 0.89
CAPN1-203ENST00000525013 HAUS3Q68CZ6 603 aa20.6■□□□□ 0.89
CAPN1-203ENST00000525013 TMC7Q7Z402 723 aa20.6■□□□□ 0.89
CAPN1-203ENST00000525013 URGCPQ8TCY9 931 aa20.6■□□□□ 0.89
CAPN1-203ENST00000525013 RSPH1Q8WYR4 309 aa20.6■□□□□ 0.89
CAPN1-203ENST00000525013 CPB2Q96IY4 423 aa20.6■□□□□ 0.89
CAPN1-203ENST00000525013 GBP3Q9H0R5 595 aa20.6■□□□□ 0.89
CAPN1-203ENST00000525013 GPRC5CQ9NQ84 441 aa20.6■□□□□ 0.89
CAPN1-203ENST00000525013 TBC1D13Q9NVG8 400 aa20.6■□□□□ 0.89
CAPN1-203ENST00000525013 LRWD1Q9UFC0 647 aa20.6■□□□□ 0.89
CAPN1-203ENST00000525013 CD207Q9UJ71 328 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms