RNA–Protein interactions for RNA: ENST00000524534.5

PTPRK-217, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 2,441 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-217ENST00000524534 RPL21P46778 160 aaKnown RBP12.43□□□□□ -0.42
PTPRK-217ENST00000524534 MMP14P50281 582 aa12.43□□□□□ -0.42
PTPRK-217ENST00000524534 MSL1Q68DK7 614 aa12.43□□□□□ -0.42
PTPRK-217ENST00000524534 AADACL2Q6P093 401 aa12.43□□□□□ -0.42
PTPRK-217ENST00000524534 CEP57Q86XR8 500 aa12.43□□□□□ -0.42
PTPRK-217ENST00000524534 CCDC17Q96LX7 622 aa12.43□□□□□ -0.42
PTPRK-217ENST00000524534 SCLT1Q96NL6 688 aa12.43□□□□□ -0.42
PTPRK-217ENST00000524534 SEMA4AQ9H3S1 761 aa12.43□□□□□ -0.42
PTPRK-217ENST00000524534 INTS9Q9NV88 658 aaKnown RBP12.43□□□□□ -0.42
PTPRK-217ENST00000524534 USP40Q9NVE5 1235 aa12.43□□□□□ -0.42
PTPRK-217ENST00000524534 RGL1Q9NZL6 768 aa12.43□□□□□ -0.42
PTPRK-217ENST00000524534 CCNL1Q9UK58 526 aaPredicted RBP12.43□□□□□ -0.42
PTPRK-217ENST00000524534 FAM13AO94988 1023 aa12.42□□□□□ -0.42
PTPRK-217ENST00000524534 ATP6V1G2O95670 118 aa12.42□□□□□ -0.42
PTPRK-217ENST00000524534 FOSP01100 380 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-217ENST00000524534 CTTNQ14247 550 aaKnown RBP12.42□□□□□ -0.42
PTPRK-217ENST00000524534 COG2Q14746 738 aa12.42□□□□□ -0.42
PTPRK-217ENST00000524534 PPP2R5AQ15172 486 aa12.42□□□□□ -0.42
PTPRK-217ENST00000524534 ZC2HC1CQ53FD0 456 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-217ENST00000524534 UBAP2Q5T6F2 1119 aaKnown RBP12.42□□□□□ -0.42
PTPRK-217ENST00000524534 C1orf186Q6ZWK4 172 aa12.42□□□□□ -0.42
PTPRK-217ENST00000524534 ZDHHC14Q8IZN3 488 aa12.42□□□□□ -0.42
PTPRK-217ENST00000524534 FIZ1Q96SL8 496 aa12.42□□□□□ -0.42
PTPRK-217ENST00000524534 AGPAT1Q99943 283 aa12.42□□□□□ -0.42
PTPRK-217ENST00000524534 PARP2Q9UGN5 583 aa12.42□□□□□ -0.42
PTPRK-217ENST00000524534 UBE4BO95155 1302 aa12.42□□□□□ -0.42
PTPRK-217ENST00000524534 UBAP1LF5GYI3 381 aa12.42□□□□□ -0.42
PTPRK-217ENST00000524534 GGPS1O95749 300 aa12.42□□□□□ -0.42
PTPRK-217ENST00000524534 HLA-DOAP06340 250 aa12.42□□□□□ -0.42
PTPRK-217ENST00000524534 KRT13P13646 458 aa12.42□□□□□ -0.42
PTPRK-217ENST00000524534 EZRP15311 586 aaKnown RBP12.42□□□□□ -0.42
PTPRK-217ENST00000524534 FAM98CQ17RN3 349 aaKnown RBP12.42□□□□□ -0.42
PTPRK-217ENST00000524534 SLFN13Q68D06 897 aa12.42□□□□□ -0.42
PTPRK-217ENST00000524534 TTC27Q6P3X3 843 aa12.42□□□□□ -0.42
PTPRK-217ENST00000524534 MYCT1Q8N699 235 aa12.42□□□□□ -0.42
PTPRK-217ENST00000524534 RBM17Q96I25 401 aaKnown RBP12.42□□□□□ -0.42
PTPRK-217ENST00000524534 PRMT1Q99873 361 aaKnown RBP12.42□□□□□ -0.42
PTPRK-217ENST00000524534 HSD17B14Q9BPX1 270 aa12.42□□□□□ -0.42
PTPRK-217ENST00000524534 AMNQ9BXJ7 453 aa12.42□□□□□ -0.42
PTPRK-217ENST00000524534 MTFR1LQ9H019 292 aa12.42□□□□□ -0.42
PTPRK-217ENST00000524534 DONSONQ9NYP3 566 aa12.42□□□□□ -0.42
PTPRK-217ENST00000524534 PFASO15067 1338 aa12.42□□□□□ -0.42
PTPRK-217ENST00000524534 FOXN3O00409 490 aaPredicted RBP12.41□□□□□ -0.42
PTPRK-217ENST00000524534 BBOX1O75936 387 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 SLURP2P0DP57 97 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 EEF2P13639 858 aaKnown RBP12.41□□□□□ -0.42
PTPRK-217ENST00000524534 PPP1R7Q15435 360 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 TRAPPC3LQ5T215 181 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 PHLDB3Q6NSJ2 640 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 HIBCHQ6NVY1 386 aaPredicted RBP12.41□□□□□ -0.42
PTPRK-217ENST00000524534 ZNF720Q7Z2F6 126 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 CERS5Q8N5B7 392 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 UBL4BQ8N7F7 174 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 LMO3Q8TAP4 145 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 PIGOQ8TEQ8 1089 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 KRT35Q92764 455 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 ZSWIM1Q9BR11 485 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 ATP6V0A4Q9HBG4 840 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 NOD2Q9HC29 1040 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 SAMD15Q9P1V8 674 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 NYAP2Q9P242 653 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 MTRF1LQ9UGC7 380 aaKnown RBP12.41□□□□□ -0.42
PTPRK-217ENST00000524534 RIPK2O43353 540 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 CYP3A4P08684 503 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 TRIM49P0CI25 452 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 TRIM49CP0CI26 452 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 RARGP13631 454 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 RFX1P22670 979 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 PEX5P50542 639 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 MYL7Q01449 175 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 RIPK1Q13546 671 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 AUHQ13825 339 aaKnown RBP12.41□□□□□ -0.42
PTPRK-217ENST00000524534 SLMAPQ14BN4 828 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 CYP1B1Q16678 543 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 ARHGAP44Q17R89 818 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 MFSD5Q6N075 450 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 TLDC1Q6P9B6 456 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 TRPM8Q7Z2W7 1104 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 CCDC63Q8NA47 563 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 CYP2W1Q8TAV3 490 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 EPS8L3Q8TE67 593 aaKnown RBP12.41□□□□□ -0.42
PTPRK-217ENST00000524534 N4BP2L2Q92802 583 aaPredicted RBP12.41□□□□□ -0.42
PTPRK-217ENST00000524534 RPS6KC1Q96S38 1066 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 ELAC2Q9BQ52 826 aaKnown RBP12.41□□□□□ -0.42
PTPRK-217ENST00000524534 STMN4Q9H169 189 aaPredicted RBP12.41□□□□□ -0.42
PTPRK-217ENST00000524534 DNAJC18Q9H819 358 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 PARVGQ9HBI0 331 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 TUFT1Q9NNX1 390 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 AGPAT3Q9NRZ7 376 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 SEPT11Q9NVA2 429 aaKnown RBP12.41□□□□□ -0.42
PTPRK-217ENST00000524534 FRMD4BQ9Y2L6 1034 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 AFF2P51816 1311 aa12.41□□□□□ -0.42
PTPRK-217ENST00000524534 CFAP73A6NFT4 308 aa12.4□□□□□ -0.42
PTPRK-217ENST00000524534 SMIM23A6NLE4 172 aa12.4□□□□□ -0.42
PTPRK-217ENST00000524534 KIF1CO43896 1103 aaKnown RBP12.4□□□□□ -0.42
PTPRK-217ENST00000524534 RAD21O60216 631 aa12.4□□□□□ -0.42
PTPRK-217ENST00000524534 SLITRK3O94933 977 aa12.4□□□□□ -0.42
PTPRK-217ENST00000524534 MARCKSL1P49006 195 aa12.4□□□□□ -0.42
PTPRK-217ENST00000524534 ZNF131P52739 623 aa12.4□□□□□ -0.42
PTPRK-217ENST00000524534 CNGA2Q16280 664 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms