RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 PPTC7Q8NI37 304 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 LRRC15Q8TF66 581 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 CACTINQ8WUQ7 758 aaKnown RBP7.81□□□□□ -1.16
VPS11-201ENST00000524454 TMEM174Q8WUU8 243 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 EMID1Q96A84 441 aaPredicted RBP7.81□□□□□ -1.16
VPS11-201ENST00000524454 DNAJC19Q96DA6 116 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 PANX2Q96RD6 677 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 HSD17B14Q9BPX1 270 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 MXRA8Q9BRK3 442 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 NOC4LQ9BVI4 516 aaKnown RBP7.81□□□□□ -1.16
VPS11-201ENST00000524454 WNT8AQ9H1J5 351 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 BLZF1Q9H2G9 400 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 TMX1Q9H3N1 280 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 HIPK3Q9H422 1215 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 OLFML3Q9NRN5 406 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 HDAC6Q9UBN7 1215 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 ODF2LQ9ULJ1 636 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 DNM3Q9UQ16 869 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 CTNND2Q9UQB3 1225 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.81□□□□□ -1.16
VPS11-201ENST00000524454 UBIAD1Q9Y5Z9 338 aa7.81□□□□□ -1.16
VPS11-201ENST00000524454 DDX39AO00148 427 aaKnown RBP7.8□□□□□ -1.16
VPS11-201ENST00000524454 IPO5O00410 1097 aaKnown RBP7.8□□□□□ -1.16
VPS11-201ENST00000524454 NOP56O00567 594 aaKnown RBP7.8□□□□□ -1.16
VPS11-201ENST00000524454 ARHGAP6O43182 974 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 DKC1O60832 514 aaKnown RBP eCLIP7.8□□□□□ -1.16
VPS11-201ENST00000524454 GAS7O60861 476 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 RNF40O75150 1001 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 LGALS2P05162 132 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 PLA2G4BP0C869 781 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 SPATA31C1P0DKV0 1188 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 ARP10275 920 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 SKILP12757 684 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 KCNA2P16389 499 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 SFNP31947 248 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 ICAM3P32942 547 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 ABCD1P33897 745 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 SLC12A3P55017 1021 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 MARSP56192 900 aaKnown RBP7.8□□□□□ -1.16
VPS11-201ENST00000524454 CCZ1BP86790 482 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 CCZ1P86791 482 aaPredicted RBP7.8□□□□□ -1.16
VPS11-201ENST00000524454 MTMR1Q13613 665 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 ALCAMQ13740 583 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 ARID5BQ14865 1188 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 EPHA7Q15375 998 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 PTGISQ16647 500 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 NFIL3Q16649 462 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 BMT2Q1RMZ1 405 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 KIAA0753Q2KHM9 967 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 EDRF1Q3B7T1 1238 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 FAM26FQ5R3K3 315 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 ISM2Q6H9L7 571 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 MFSD5Q6N075 450 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 Q7L0L9 218 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 C16orf59Q7L2K0 433 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 TMC6Q7Z403 805 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 NLRX1Q86UT6 975 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 CATSPER3Q86XQ3 398 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 SLC17A8Q8NDX2 589 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 WNT8BQ93098 351 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 GPRASP2Q96D09 838 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 RNPC3Q96LT9 517 aaKnown RBP7.8□□□□□ -1.16
VPS11-201ENST00000524454 PRIMPOLQ96LW4 560 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 CEP63Q96MT8 703 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 NACC1Q96RE7 527 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 GPR20Q99678 358 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 TSG101Q99816 390 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 SENP7Q9BQF6 1050 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.8□□□□□ -1.16
VPS11-201ENST00000524454 TEKT3Q9BXF9 490 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 SAMSN1Q9NSI8 373 aaKnown RBP7.8□□□□□ -1.16
VPS11-201ENST00000524454 INTS13Q9NVM9 706 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 MAGEC2Q9UBF1 373 aaPredicted RBP7.8□□□□□ -1.16
VPS11-201ENST00000524454 TSR3Q9UJK0 312 aaKnown RBP7.8□□□□□ -1.16
VPS11-201ENST00000524454 KIAA1024Q9UPX6 916 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 SIP14410 1827 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 PTPRSQ13332 1948 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 WDR81Q562E7 1941 aa7.8□□□□□ -1.16
VPS11-201ENST00000524454 A0A1W2PPC1 479 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 LGALS16A8MUM7 142 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 KCNJ18B7U540 433 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 HAS3O00219 553 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 EIF3DO15371 548 aaKnown RBP eCLIP7.79□□□□□ -1.16
VPS11-201ENST00000524454 KPNA6O60684 536 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 F2P00734 622 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 TGFB3P10600 412 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 MAPTP10636 758 aaKnown RBP7.79□□□□□ -1.16
VPS11-201ENST00000524454 CYP11B2P19099 503 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 GUCY2CP25092 1073 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 MARK3P27448 753 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 DNM2P50570 870 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 JAK3P52333 1124 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 ZNF131P52739 623 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 COPB1P53618 953 aaKnown RBP7.79□□□□□ -1.16
VPS11-201ENST00000524454 KRT76Q01546 638 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 STK4Q13043 487 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 KCNJ12Q14500 433 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 NEDD9Q14511 834 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 MCM6Q14566 821 aa7.79□□□□□ -1.16
VPS11-201ENST00000524454 KRT31Q15323 416 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms