RNA–Protein interactions for RNA: ENST00000524442.1

TTC39A-213, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-213ENST00000524442 PIN4Q9Y237 131 aaKnown RBP11.2□□□□□ -0.62
TTC39A-213ENST00000524442 RWDD3Q9Y3V2 267 aa11.2□□□□□ -0.62
TTC39A-213ENST00000524442 TTC3P53804 2025 aa11.19□□□□□ -0.62
TTC39A-213ENST00000524442 LRRIQ4A6NIV6 560 aa11.19□□□□□ -0.62
TTC39A-213ENST00000524442 INO80B-WBP1J3KQ70 363 aa11.19□□□□□ -0.62
TTC39A-213ENST00000524442 CUTAO60888 179 aa11.19□□□□□ -0.62
TTC39A-213ENST00000524442 SSBP05455 408 aaKnown RBP eCLIP11.19□□□□□ -0.62
TTC39A-213ENST00000524442 PLCG1P19174 1290 aa11.19□□□□□ -0.62
TTC39A-213ENST00000524442 SCP2P22307 547 aa11.19□□□□□ -0.62
TTC39A-213ENST00000524442 FGFR4P22455 802 aa11.19□□□□□ -0.62
TTC39A-213ENST00000524442 ERVK-21P61565 698 aa11.19□□□□□ -0.62
TTC39A-213ENST00000524442 KRT85P78386 507 aa11.19□□□□□ -0.62
TTC39A-213ENST00000524442 DNM1Q05193 864 aaKnown RBP11.19□□□□□ -0.62
TTC39A-213ENST00000524442 MBTD1Q05BQ5 628 aa11.19□□□□□ -0.62
TTC39A-213ENST00000524442 GRIN2CQ14957 1233 aa11.19□□□□□ -0.62
TTC39A-213ENST00000524442 FAM187BQ17R55 369 aa11.19□□□□□ -0.62
TTC39A-213ENST00000524442 RRAGBQ5VZM2 374 aa11.19□□□□□ -0.62
TTC39A-213ENST00000524442 TWF2Q6IBS0 349 aaKnown RBP11.19□□□□□ -0.62
TTC39A-213ENST00000524442 PPP4R3CPQ6ZMV5 832 aa11.19□□□□□ -0.62
TTC39A-213ENST00000524442 CCDC73Q6ZRK6 1079 aa11.19□□□□□ -0.62
TTC39A-213ENST00000524442 ECHDC2Q86YB7 292 aa11.19□□□□□ -0.62
TTC39A-213ENST00000524442 CMTR2Q8IYT2 770 aaKnown RBP11.19□□□□□ -0.62
TTC39A-213ENST00000524442 FIBCD1Q8N539 461 aa11.19□□□□□ -0.62
TTC39A-213ENST00000524442 CNNM3Q8NE01 707 aa11.19□□□□□ -0.62
TTC39A-213ENST00000524442 DEPTORQ8TB45 409 aa11.19□□□□□ -0.62
TTC39A-213ENST00000524442 LARP4BQ92615 738 aaKnown RBP11.19□□□□□ -0.62
TTC39A-213ENST00000524442 RAD54LQ92698 747 aa11.19□□□□□ -0.62
TTC39A-213ENST00000524442 CLIC6Q96NY7 704 aa11.19□□□□□ -0.62
TTC39A-213ENST00000524442 RUSC1Q9BVN2 902 aa11.19□□□□□ -0.62
TTC39A-213ENST00000524442 FZD8Q9H461 694 aa11.19□□□□□ -0.62
TTC39A-213ENST00000524442 BLOC1S4Q9NUP1 217 aa11.19□□□□□ -0.62
TTC39A-213ENST00000524442 PRMT7Q9NVM4 692 aaPredicted RBP11.19□□□□□ -0.62
TTC39A-213ENST00000524442 RCOR1Q9UKL0 485 aa11.19□□□□□ -0.62
TTC39A-213ENST00000524442 ODF2LQ9ULJ1 636 aa11.19□□□□□ -0.62
TTC39A-213ENST00000524442 ZDHHC9Q9Y397 364 aa11.19□□□□□ -0.62
TTC39A-213ENST00000524442 RBM19Q9Y4C8 960 aaKnown RBP11.19□□□□□ -0.62
TTC39A-213ENST00000524442 LAMA2P24043 3122 aaKnown RBP11.19□□□□□ -0.62
TTC39A-213ENST00000524442 LOXHD1Q8IVV2 1947 aa11.19□□□□□ -0.62
TTC39A-213ENST00000524442 SZT2Q5T011 3432 aa11.19□□□□□ -0.62
TTC39A-213ENST00000524442 ADGRA3Q8IWK6 1321 aa11.18□□□□□ -0.62
TTC39A-213ENST00000524442 LCHNA4D1U4 455 aa11.18□□□□□ -0.62
TTC39A-213ENST00000524442 LINC01553A4QN01 128 aa11.18□□□□□ -0.62
TTC39A-213ENST00000524442 TSPAN1O60635 241 aa11.18□□□□□ -0.62
TTC39A-213ENST00000524442 HIP1RO75146 1068 aa11.18□□□□□ -0.62
TTC39A-213ENST00000524442 HOXA11P31270 313 aaPredicted RBP11.18□□□□□ -0.62
TTC39A-213ENST00000524442 MAPK7Q13164 816 aa11.18□□□□□ -0.62
TTC39A-213ENST00000524442 DMP1Q13316 513 aaPredicted RBP11.18□□□□□ -0.62
TTC39A-213ENST00000524442 BTG3Q14201 252 aaPredicted RBP11.18□□□□□ -0.62
TTC39A-213ENST00000524442 MAPK6Q16659 721 aa11.18□□□□□ -0.62
TTC39A-213ENST00000524442 FOXD4L6Q3SYB3 417 aaPredicted RBP11.18□□□□□ -0.62
TTC39A-213ENST00000524442 SPECC1Q5M775 1068 aa11.18□□□□□ -0.62
TTC39A-213ENST00000524442 NOTUMQ6P988 496 aa11.18□□□□□ -0.62
TTC39A-213ENST00000524442 FOXD4L3Q6VB84 417 aaPredicted RBP11.18□□□□□ -0.62
TTC39A-213ENST00000524442 USP49Q70CQ1 688 aa11.18□□□□□ -0.62
TTC39A-213ENST00000524442 ZNF598Q86UK7 904 aaKnown RBP11.18□□□□□ -0.62
TTC39A-213ENST00000524442 DAW1Q8N136 415 aa11.18□□□□□ -0.62
TTC39A-213ENST00000524442 SPIRE2Q8WWL2 714 aa11.18□□□□□ -0.62
TTC39A-213ENST00000524442 BSNDQ8WZ55 320 aa11.18□□□□□ -0.62
TTC39A-213ENST00000524442 PGBD4Q96DM1 585 aa11.18□□□□□ -0.62
TTC39A-213ENST00000524442 FAM161BQ96MY7 647 aa11.18□□□□□ -0.62
TTC39A-213ENST00000524442 GUCD1Q96NT3 240 aa11.18□□□□□ -0.62
TTC39A-213ENST00000524442 CDX2Q99626 313 aaPredicted RBP11.18□□□□□ -0.62
TTC39A-213ENST00000524442 NTPCRQ9BSD7 190 aaKnown RBP11.18□□□□□ -0.62
TTC39A-213ENST00000524442 TMEM117Q9H0C3 514 aa11.18□□□□□ -0.62
TTC39A-213ENST00000524442 FAM105AQ9NUU6 356 aa11.18□□□□□ -0.62
TTC39A-213ENST00000524442 PTPRSQ13332 1948 aa11.17□□□□□ -0.62
TTC39A-213ENST00000524442 A0A1B0GUA9 196 aa11.17□□□□□ -0.62
TTC39A-213ENST00000524442 H0YCG3 227 aa11.17□□□□□ -0.62
TTC39A-213ENST00000524442 ACKR2O00590 384 aa11.17□□□□□ -0.62
TTC39A-213ENST00000524442 RB1P06400 928 aa11.17□□□□□ -0.62
TTC39A-213ENST00000524442 PLS3P13797 630 aa11.17□□□□□ -0.62
TTC39A-213ENST00000524442 NPTX2P47972 431 aa11.17□□□□□ -0.62
TTC39A-213ENST00000524442 ME1P48163 572 aa11.17□□□□□ -0.62
TTC39A-213ENST00000524442 SMTNP53814 917 aa11.17□□□□□ -0.62
TTC39A-213ENST00000524442 AMHR2Q16671 573 aa11.17□□□□□ -0.62
TTC39A-213ENST00000524442 ARSHQ5FYA8 562 aa11.17□□□□□ -0.62
TTC39A-213ENST00000524442 AXDND1Q5T1B0 1012 aaPredicted RBP11.17□□□□□ -0.62
TTC39A-213ENST00000524442 GPBP1Q86WP2 473 aa11.17□□□□□ -0.62
TTC39A-213ENST00000524442 ABI1Q8IZP0 508 aa11.17□□□□□ -0.62
TTC39A-213ENST00000524442 KCNN1Q92952 543 aa11.17□□□□□ -0.62
TTC39A-213ENST00000524442 CLP1Q92989 425 aaKnown RBP11.17□□□□□ -0.62
TTC39A-213ENST00000524442 GAS2L1Q99501 681 aaPredicted RBP11.17□□□□□ -0.62
TTC39A-213ENST00000524442 PYM1Q9BRP8 204 aaKnown RBP11.17□□□□□ -0.62
TTC39A-213ENST00000524442 SCAND2PQ9GZW5 306 aaPredicted RBP11.17□□□□□ -0.62
TTC39A-213ENST00000524442 CUEDC2Q9H467 287 aa11.17□□□□□ -0.62
TTC39A-213ENST00000524442 TMEM134Q9H6X4 195 aa11.17□□□□□ -0.62
TTC39A-213ENST00000524442 KMT5AQ9NQR1 393 aa11.17□□□□□ -0.62
TTC39A-213ENST00000524442 LARSQ9P2J5 1176 aaKnown RBP11.17□□□□□ -0.62
TTC39A-213ENST00000524442 PCDHA7Q9UN72 937 aa11.17□□□□□ -0.62
TTC39A-213ENST00000524442 STXBP5LQ9Y2K9 1186 aa11.17□□□□□ -0.62
TTC39A-213ENST00000524442 PCDHB2Q9Y5E7 798 aa11.17□□□□□ -0.62
TTC39A-213ENST00000524442 CNTNAP2Q9UHC6 1331 aa11.16□□□□□ -0.62
TTC39A-213ENST00000524442 CARNS1A5YM72 827 aa11.16□□□□□ -0.62
TTC39A-213ENST00000524442 CCDC169A6NNP5 214 aa11.16□□□□□ -0.62
TTC39A-213ENST00000524442 RBAK-RBAKDNI3L0D1 243 aa11.16□□□□□ -0.62
TTC39A-213ENST00000524442 K7ERI5 159 aa11.16□□□□□ -0.62
TTC39A-213ENST00000524442 ARHGEF15O94989 841 aa11.16□□□□□ -0.62
TTC39A-213ENST00000524442 SLC34A2O95436 690 aa11.16□□□□□ -0.62
TTC39A-213ENST00000524442 PRKCBP05771 671 aa11.16□□□□□ -0.62
TTC39A-213ENST00000524442 KRT18P05783 430 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms