RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 PPP4R4Q6NUP7 873 aa7.56□□□□□ -1.2
SKP1-213ENST00000524288 PLEKHH3Q7Z736 793 aa7.56□□□□□ -1.2
SKP1-213ENST00000524288 CATIPQ7Z7H3 387 aa7.56□□□□□ -1.2
SKP1-213ENST00000524288 CCAR1Q8IX12 1150 aaKnown RBP7.56□□□□□ -1.2
SKP1-213ENST00000524288 SAMD11Q96NU1 681 aa7.56□□□□□ -1.2
SKP1-213ENST00000524288 TUBD1Q9UJT1 453 aa7.56□□□□□ -1.2
SKP1-213ENST00000524288 WASF3Q9UPY6 502 aa7.56□□□□□ -1.2
SKP1-213ENST00000524288 PCDH8O95206 1070 aa7.55□□□□□ -1.2
SKP1-213ENST00000524288 LPOP22079 712 aaPredicted RBP7.55□□□□□ -1.2
SKP1-213ENST00000524288 PFKPQ01813 784 aa7.55□□□□□ -1.2
SKP1-213ENST00000524288 KIF23Q02241 960 aaPredicted RBP7.55□□□□□ -1.2
SKP1-213ENST00000524288 ZNF267Q14586 743 aaPredicted RBP7.55□□□□□ -1.2
SKP1-213ENST00000524288 NOLC1Q14978 699 aaKnown RBP eCLIP7.55□□□□□ -1.2
SKP1-213ENST00000524288 MINDY4Q4G0A6 757 aa7.55□□□□□ -1.2
SKP1-213ENST00000524288 TBC1D10BQ4KMP7 808 aaPredicted RBP7.55□□□□□ -1.2
SKP1-213ENST00000524288 IFIT1BQ5T764 474 aaKnown RBP7.55□□□□□ -1.2
SKP1-213ENST00000524288 KCNK18Q7Z418 384 aa7.55□□□□□ -1.2
SKP1-213ENST00000524288 PROSER1Q86XN7 944 aa7.55□□□□□ -1.2
SKP1-213ENST00000524288 AMNQ9BXJ7 453 aa7.55□□□□□ -1.2
SKP1-213ENST00000524288 PDGFDQ9GZP0 370 aaPredicted RBP7.55□□□□□ -1.2
SKP1-213ENST00000524288 L2HGDHQ9H9P8 463 aa7.55□□□□□ -1.2
SKP1-213ENST00000524288 INCENPQ9NQS7 918 aa7.55□□□□□ -1.2
SKP1-213ENST00000524288 SMPD4Q9NXE4 827 aa7.55□□□□□ -1.2
SKP1-213ENST00000524288 DDX20Q9UHI6 824 aaKnown RBP7.55□□□□□ -1.2
SKP1-213ENST00000524288 NDUFS2O75306 463 aa7.54□□□□□ -1.2
SKP1-213ENST00000524288 IL13P35225 146 aa7.54□□□□□ -1.2
SKP1-213ENST00000524288 FXR1P51114 621 aaKnown RBP eCLIP7.54□□□□□ -1.2
SKP1-213ENST00000524288 ROM1Q03395 351 aa7.54□□□□□ -1.2
SKP1-213ENST00000524288 ZXDCQ2QGD7 858 aaPredicted RBP7.54□□□□□ -1.2
SKP1-213ENST00000524288 ARHGAP29Q52LW3 1261 aa7.54□□□□□ -1.2
SKP1-213ENST00000524288 CCSAPQ6IQ19 270 aaPredicted RBP7.54□□□□□ -1.2
SKP1-213ENST00000524288 KIAA1841Q6NSI8 718 aa7.54□□□□□ -1.2
SKP1-213ENST00000524288 E2F7Q96AV8 911 aa7.54□□□□□ -1.2
SKP1-213ENST00000524288 YTHDC1Q96MU7 727 aaKnown RBP7.54□□□□□ -1.2
SKP1-213ENST00000524288 FOXB1Q99853 325 aa7.54□□□□□ -1.2
SKP1-213ENST00000524288 SERPINB13Q9UIV8 391 aa7.54□□□□□ -1.2
SKP1-213ENST00000524288 TMPRSS11EQ9UL52 423 aa7.54□□□□□ -1.2
SKP1-213ENST00000524288 USP18Q9UMW8 372 aa7.54□□□□□ -1.2
SKP1-213ENST00000524288 MYRFQ9Y2G1 1151 aa7.54□□□□□ -1.2
SKP1-213ENST00000524288 ZNF839A8K0R7 811 aa7.53□□□□□ -1.2
SKP1-213ENST00000524288 AP1G1O43747 822 aa7.53□□□□□ -1.2
SKP1-213ENST00000524288 CYP1A1P04798 512 aaPredicted RBP7.53□□□□□ -1.2
SKP1-213ENST00000524288 GLRBP48167 497 aa7.53□□□□□ -1.2
SKP1-213ENST00000524288 RHBDL3P58872 404 aa7.53□□□□□ -1.2
SKP1-213ENST00000524288 PPARAQ07869 468 aa7.53□□□□□ -1.2
SKP1-213ENST00000524288 GRM3Q14832 879 aa7.53□□□□□ -1.2
SKP1-213ENST00000524288 UAP1L1Q3KQV9 507 aa7.53□□□□□ -1.2
SKP1-213ENST00000524288 RRP12Q5JTH9 1297 aaKnown RBP7.53□□□□□ -1.2
SKP1-213ENST00000524288 VASNQ6EMK4 673 aa7.53□□□□□ -1.2
SKP1-213ENST00000524288 DGKHQ86XP1 1220 aa7.53□□□□□ -1.2
SKP1-213ENST00000524288 MIER2Q8N344 545 aa7.53□□□□□ -1.2
SKP1-213ENST00000524288 TSPEARQ8WU66 669 aa7.53□□□□□ -1.2
SKP1-213ENST00000524288 AUTS2Q8WXX7 1259 aa7.53□□□□□ -1.2
SKP1-213ENST00000524288 ZSWIM3Q96MP5 696 aa7.53□□□□□ -1.2
SKP1-213ENST00000524288 TMEM168Q9H0V1 697 aa7.53□□□□□ -1.2
SKP1-213ENST00000524288 ARNT2Q9HBZ2 717 aa7.53□□□□□ -1.2
SKP1-213ENST00000524288 CHST12Q9NRB3 414 aa7.53□□□□□ -1.2
SKP1-213ENST00000524288 ZNF277Q9NRM2 450 aaPredicted RBP7.53□□□□□ -1.2
SKP1-213ENST00000524288 SAP30BPQ9UHR5 308 aaKnown RBP7.53□□□□□ -1.2
SKP1-213ENST00000524288 CHGBP05060 677 aa7.52□□□□□ -1.21
SKP1-213ENST00000524288 MYL1P05976 194 aa7.52□□□□□ -1.21
SKP1-213ENST00000524288 MRPS9P82933 396 aaKnown RBP7.52□□□□□ -1.21
SKP1-213ENST00000524288 SKIDA1Q1XH10 827 aa7.52□□□□□ -1.21
SKP1-213ENST00000524288 MUM1Q2TAK8 710 aa7.52□□□□□ -1.21
SKP1-213ENST00000524288 SYCP2LQ5T4T6 812 aa7.52□□□□□ -1.21
SKP1-213ENST00000524288 GGNQ86UU5 652 aa7.52□□□□□ -1.21
SKP1-213ENST00000524288 LYSMD2Q8IV50 215 aa7.52□□□□□ -1.21
SKP1-213ENST00000524288 PMM1Q92871 262 aa7.52□□□□□ -1.21
SKP1-213ENST00000524288 GPR20Q99678 358 aa7.52□□□□□ -1.21
SKP1-213ENST00000524288 CSRNP2Q9H175 543 aa7.52□□□□□ -1.21
SKP1-213ENST00000524288 MTG2Q9H4K7 406 aa7.52□□□□□ -1.21
SKP1-213ENST00000524288 IFT122Q9HBG6 1241 aa7.52□□□□□ -1.21
SKP1-213ENST00000524288 NMRK2Q9NPI5 230 aa7.52□□□□□ -1.21
SKP1-213ENST00000524288 DLL4Q9NR61 685 aa7.52□□□□□ -1.21
SKP1-213ENST00000524288 FTSJ1Q9UET6 329 aa7.52□□□□□ -1.21
SKP1-213ENST00000524288 MAGEL2Q9UJ55 1249 aa7.52□□□□□ -1.21
SKP1-213ENST00000524288 LAMTOR5O43504 91 aa7.51□□□□□ -1.21
SKP1-213ENST00000524288 PLIN1O60240 522 aa7.51□□□□□ -1.21
SKP1-213ENST00000524288 PFKMP08237 780 aa7.51□□□□□ -1.21
SKP1-213ENST00000524288 ENO2P09104 434 aaPredicted RBP7.51□□□□□ -1.21
SKP1-213ENST00000524288 U2AF1L5P0DN76 240 aaPredicted RBP7.51□□□□□ -1.21
SKP1-213ENST00000524288 HSPA6P17066 643 aa7.51□□□□□ -1.21
SKP1-213ENST00000524288 ADAM17P78536 824 aa7.51□□□□□ -1.21
SKP1-213ENST00000524288 U2AF1Q01081 240 aaKnown RBP eCLIP7.51□□□□□ -1.219e-7■■■■□ 24.3
SKP1-213ENST00000524288 GTF2H3Q13889 308 aa7.51□□□□□ -1.21
SKP1-213ENST00000524288 GLB1LQ6UWU2 654 aa7.51□□□□□ -1.21
SKP1-213ENST00000524288 KANSL1Q7Z3B3 1105 aa7.51□□□□□ -1.21
SKP1-213ENST00000524288 KLHL36Q8N4N3 616 aa7.51□□□□□ -1.21
SKP1-213ENST00000524288 MBD6Q96DN6 1003 aa7.51□□□□□ -1.21
SKP1-213ENST00000524288 RAX2Q96IS3 184 aa7.51□□□□□ -1.21
SKP1-213ENST00000524288 AIFM3Q96NN9 605 aa7.51□□□□□ -1.21
SKP1-213ENST00000524288 NUP88Q99567 741 aaPredicted RBP7.51□□□□□ -1.21
SKP1-213ENST00000524288 TACO1Q9BSH4 297 aaKnown RBP7.51□□□□□ -1.21
SKP1-213ENST00000524288 C1QTNF3Q9BXJ4 246 aa7.51□□□□□ -1.21
SKP1-213ENST00000524288 GTPBP4Q9BZE4 634 aaKnown RBP7.51□□□□□ -1.21
SKP1-213ENST00000524288 SLC12A5Q9H2X9 1139 aa7.51□□□□□ -1.21
SKP1-213ENST00000524288 RCAN3Q9UKA8 241 aa7.51□□□□□ -1.21
SKP1-213ENST00000524288 CROTQ9UKG9 612 aa7.51□□□□□ -1.21
SKP1-213ENST00000524288 MYPNQ86TC9 1320 aa7.51□□□□□ -1.21
SKP1-213ENST00000524288 B4GALT3O60512 393 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms