RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 SNAP23O00161 211 aa10.95□□□□□ -0.66
SPIDR-224ENST00000524126 PRKAB2O43741 272 aa10.95□□□□□ -0.66
SPIDR-224ENST00000524126 FOXN2P32314 431 aa10.95□□□□□ -0.66
SPIDR-224ENST00000524126 OCRLQ01968 901 aa10.95□□□□□ -0.66
SPIDR-224ENST00000524126 KLHL30Q0D2K2 578 aa10.95□□□□□ -0.66
SPIDR-224ENST00000524126 TTLL12Q14166 644 aaPredicted RBP10.95□□□□□ -0.66
SPIDR-224ENST00000524126 MFSD6Q6ZSS7 791 aa10.95□□□□□ -0.66
SPIDR-224ENST00000524126 PEX26Q7Z412 305 aa10.95□□□□□ -0.66
SPIDR-224ENST00000524126 CCDC84Q86UT8 332 aaPredicted RBP10.95□□□□□ -0.66
SPIDR-224ENST00000524126 IFNL3Q8IZI9 196 aa10.95□□□□□ -0.66
SPIDR-224ENST00000524126 RIBC1Q8N443 379 aaPredicted RBP10.95□□□□□ -0.66
SPIDR-224ENST00000524126 RASGRP4Q8TDF6 673 aa10.95□□□□□ -0.66
SPIDR-224ENST00000524126 LENG1Q96BZ8 264 aaPredicted RBP10.95□□□□□ -0.66
SPIDR-224ENST00000524126 NMD3Q96D46 503 aaKnown RBP10.95□□□□□ -0.66
SPIDR-224ENST00000524126 MPP4Q96JB8 637 aa10.95□□□□□ -0.66
SPIDR-224ENST00000524126 CLMNQ96JQ2 1002 aa10.95□□□□□ -0.66
SPIDR-224ENST00000524126 MIPEPQ99797 713 aa10.95□□□□□ -0.66
SPIDR-224ENST00000524126 ERP44Q9BS26 406 aa10.95□□□□□ -0.66
SPIDR-224ENST00000524126 KBTBD4Q9NVX7 518 aa10.95□□□□□ -0.66
SPIDR-224ENST00000524126 TUBGCP4Q9UGJ1 667 aa10.95□□□□□ -0.66
SPIDR-224ENST00000524126 RIPK2O43353 540 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 TBX10O75333 385 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 PCCAP05165 728 aaPredicted RBP10.94□□□□□ -0.66
SPIDR-224ENST00000524126 STX2P32856 288 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 LONP1P36776 959 aaKnown RBP10.94□□□□□ -0.66
SPIDR-224ENST00000524126 POLGP54098 1239 aaPredicted RBP10.94□□□□□ -0.66
SPIDR-224ENST00000524126 CCDC15Q0P6D6 951 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 KPNB1Q14974 876 aaKnown RBP10.94□□□□□ -0.66
SPIDR-224ENST00000524126 SETDB1Q15047 1291 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 MTFR1Q15390 333 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 SPDYCQ5MJ68 293 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 SUSD4Q5VX71 490 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 CCDC25Q86WR0 208 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 RNF168Q8IYW5 571 aaPredicted RBP10.94□□□□□ -0.66
SPIDR-224ENST00000524126 ARHGAP18Q8N392 663 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 RASGEF1CQ8N431 466 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 C4orf32Q8N8J7 132 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 ZBTB8BQ8NAP8 495 aaPredicted RBP10.94□□□□□ -0.66
SPIDR-224ENST00000524126 SPOCK2Q92563 424 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 ESR2Q92731 530 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 NAP1L3Q99457 506 aaPredicted RBP10.94□□□□□ -0.66
SPIDR-224ENST00000524126 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.94□□□□□ -0.661e-6■■■■□ 22.4
SPIDR-224ENST00000524126 NT5C3AQ9H0P0 336 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 TMEM60Q9H2L4 133 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 QTRT2Q9H974 415 aaKnown RBP10.94□□□□□ -0.66
SPIDR-224ENST00000524126 KRT82Q9NSB4 513 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 SRP68Q9UHB9 627 aaKnown RBP10.94□□□□□ -0.66
SPIDR-224ENST00000524126 WASF2Q9Y6W5 498 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 COMMD3-BMI1R4GMX3 469 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 UTRNP46939 3433 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 ECE2O60344 883 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 OR6B1O95007 311 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 PAX3P23760 479 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 NLRP5P59047 1200 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 ZNF211Q13398 564 aaPredicted RBP10.94□□□□□ -0.66
SPIDR-224ENST00000524126 TMED1Q13445 227 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 EXOC3L4Q17RC7 722 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 ACSBG2Q5FVE4 666 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 C4orf50Q6ZRC1 276 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 HS2ST1Q7LGA3 356 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 SLC51AQ86UW1 340 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 SPATA24Q86W54 205 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 PALB2Q86YC2 1186 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 TPCN2Q8NHX9 752 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 INPP5DQ92835 1189 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 STRBPQ96SI9 672 aaKnown RBP10.94□□□□□ -0.66
SPIDR-224ENST00000524126 GREM2Q9H772 168 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 ARMT1Q9H993 441 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 TRMT112Q9UI30 125 aaKnown RBP10.94□□□□□ -0.66
SPIDR-224ENST00000524126 PFASO15067 1338 aa10.94□□□□□ -0.66
SPIDR-224ENST00000524126 CHD4Q14839 1912 aa10.93□□□□□ -0.66
SPIDR-224ENST00000524126 KIAA0391O15091 583 aaKnown RBP10.93□□□□□ -0.66
SPIDR-224ENST00000524126 CCDC166P0CW27 439 aa10.93□□□□□ -0.66
SPIDR-224ENST00000524126 PLCG1P19174 1290 aa10.93□□□□□ -0.66
SPIDR-224ENST00000524126 SERPINB3P29508 390 aa10.93□□□□□ -0.66
SPIDR-224ENST00000524126 FUT2Q10981 343 aa10.93□□□□□ -0.66
SPIDR-224ENST00000524126 BTG3Q14201 252 aaPredicted RBP10.93□□□□□ -0.66
SPIDR-224ENST00000524126 RFX8Q6ZV50 586 aa10.93□□□□□ -0.66
SPIDR-224ENST00000524126 JAMLQ86YT9 394 aa10.93□□□□□ -0.66
SPIDR-224ENST00000524126 NAT14Q8WUY8 206 aa10.93□□□□□ -0.66
SPIDR-224ENST00000524126 TRIM9Q9C026 710 aa10.93□□□□□ -0.66
SPIDR-224ENST00000524126 GRHL1Q9NZI5 618 aa10.93□□□□□ -0.66
SPIDR-224ENST00000524126 CEP72Q9P209 647 aa10.93□□□□□ -0.66
SPIDR-224ENST00000524126 BTAF1O14981 1849 aa10.93□□□□□ -0.66
SPIDR-224ENST00000524126 COL4A1P02462 1669 aa10.93□□□□□ -0.66
SPIDR-224ENST00000524126 VAV1P15498 845 aa10.93□□□□□ -0.66
SPIDR-224ENST00000524126 PDE6AP16499 860 aa10.93□□□□□ -0.66
SPIDR-224ENST00000524126 CYP11B2P19099 503 aa10.93□□□□□ -0.66
SPIDR-224ENST00000524126 TAC1P20366 129 aa10.93□□□□□ -0.66
SPIDR-224ENST00000524126 MARK3P27448 753 aa10.93□□□□□ -0.66
SPIDR-224ENST00000524126 IL6STP40189 918 aaPredicted RBP10.93□□□□□ -0.66
SPIDR-224ENST00000524126 UBA7P41226 1012 aa10.93□□□□□ -0.66
SPIDR-224ENST00000524126 RPL21P46778 160 aaKnown RBP10.93□□□□□ -0.66
SPIDR-224ENST00000524126 GJA8P48165 433 aa10.93□□□□□ -0.66
SPIDR-224ENST00000524126 HPCAP84074 193 aa10.93□□□□□ -0.66
SPIDR-224ENST00000524126 KIAA1755Q5JYT7 1200 aa10.93□□□□□ -0.66
SPIDR-224ENST00000524126 AADACL2Q6P093 401 aa10.93□□□□□ -0.66
SPIDR-224ENST00000524126 SH3RF3Q8TEJ3 882 aaPredicted RBP10.93□□□□□ -0.66
SPIDR-224ENST00000524126 LRRC37BQ96QE4 947 aa10.93□□□□□ -0.66
SPIDR-224ENST00000524126 MTA3Q9BTC8 594 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms