RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 SPATA6Q9NWH7 488 aaPredicted RBP10.54□□□□□ -0.72
PTPN12-216ENST00000523952 USP18Q9UMW8 372 aa10.54□□□□□ -0.72
PTPN12-216ENST00000523952 SSX2IPQ9Y2D8 614 aa10.54□□□□□ -0.72
PTPN12-216ENST00000523952 CLUHO75153 1309 aa10.54□□□□□ -0.72
PTPN12-216ENST00000523952 ARID2Q68CP9 1835 aa10.54□□□□□ -0.72
PTPN12-216ENST00000523952 PRR5-ARHGAP8B1AHC4 643 aa10.53□□□□□ -0.72
PTPN12-216ENST00000523952 ZBTB42B2RXF5 422 aa10.53□□□□□ -0.72
PTPN12-216ENST00000523952 C2CD2LO14523 706 aa10.53□□□□□ -0.72
PTPN12-216ENST00000523952 SPTLC1O15269 473 aa10.53□□□□□ -0.72
PTPN12-216ENST00000523952 INPPL1O15357 1258 aa10.53□□□□□ -0.72
PTPN12-216ENST00000523952 CCNE2O96020 404 aa10.53□□□□□ -0.72
PTPN12-216ENST00000523952 URODP06132 367 aa10.53□□□□□ -0.72
PTPN12-216ENST00000523952 ADH1AP07327 375 aa10.53□□□□□ -0.72
PTPN12-216ENST00000523952 RXRAP19793 462 aa10.53□□□□□ -0.72
PTPN12-216ENST00000523952 FGFR4P22455 802 aa10.53□□□□□ -0.72
PTPN12-216ENST00000523952 SFPQP23246 707 aaKnown RBP eCLIP10.53□□□□□ -0.722e-7■■■■■ 27
PTPN12-216ENST00000523952 ADCY7P51828 1080 aa10.53□□□□□ -0.72
PTPN12-216ENST00000523952 AK2P54819 239 aa10.53□□□□□ -0.72
PTPN12-216ENST00000523952 ARHGAP8P85298 464 aa10.53□□□□□ -0.72
PTPN12-216ENST00000523952 LMNB2Q03252 620 aa10.53□□□□□ -0.72
PTPN12-216ENST00000523952 NOMO2Q5JPE7 1267 aa10.53□□□□□ -0.72
PTPN12-216ENST00000523952 CHD1LQ86WJ1 897 aa10.53□□□□□ -0.72
PTPN12-216ENST00000523952 TMEM173Q86WV6 379 aaPredicted RBP10.53□□□□□ -0.72
PTPN12-216ENST00000523952 SLC44A3Q8N4M1 653 aa10.53□□□□□ -0.72
PTPN12-216ENST00000523952 IGDCC4Q8TDY8 1250 aa10.53□□□□□ -0.72
PTPN12-216ENST00000523952 SMG7Q92540 1137 aaKnown RBP10.53□□□□□ -0.72
PTPN12-216ENST00000523952 PHKBQ93100 1093 aa10.53□□□□□ -0.72
PTPN12-216ENST00000523952 BORCS6Q96GS4 357 aa10.53□□□□□ -0.72
PTPN12-216ENST00000523952 KLHL5Q96PQ7 755 aa10.53□□□□□ -0.72
PTPN12-216ENST00000523952 ZNF577Q9BSK1 485 aa10.53□□□□□ -0.72
PTPN12-216ENST00000523952 BCO2Q9BYV7 579 aa10.53□□□□□ -0.72
PTPN12-216ENST00000523952 GCOM2Q9BZD3 368 aaPredicted RBP10.53□□□□□ -0.72
PTPN12-216ENST00000523952 RWDD1Q9H446 243 aaPredicted RBP10.53□□□□□ -0.72
PTPN12-216ENST00000523952 OSBPL3Q9H4L5 887 aa10.53□□□□□ -0.72
PTPN12-216ENST00000523952 LY9Q9HBG7 655 aa10.53□□□□□ -0.72
PTPN12-216ENST00000523952 GABBR1Q9UBS5 961 aa10.53□□□□□ -0.72
PTPN12-216ENST00000523952 IPO5O00410 1097 aaKnown RBP10.52□□□□□ -0.73
PTPN12-216ENST00000523952 MEIS1O00470 390 aa10.52□□□□□ -0.73
PTPN12-216ENST00000523952 GALTP07902 379 aa10.52□□□□□ -0.73
PTPN12-216ENST00000523952 CNPP09543 421 aaKnown RBP10.52□□□□□ -0.73
PTPN12-216ENST00000523952 MYBP10242 640 aa10.52□□□□□ -0.73
PTPN12-216ENST00000523952 DARSP14868 501 aaKnown RBP10.52□□□□□ -0.73
PTPN12-216ENST00000523952 PHKA2P46019 1235 aa10.52□□□□□ -0.73
PTPN12-216ENST00000523952 GPC3P51654 580 aa10.52□□□□□ -0.73
PTPN12-216ENST00000523952 CYP26C1Q6V0L0 522 aa10.52□□□□□ -0.73
PTPN12-216ENST00000523952 SYNE3Q6ZMZ3 975 aa10.52□□□□□ -0.73
PTPN12-216ENST00000523952 GET4Q7L5D6 327 aaPredicted RBP10.52□□□□□ -0.73
PTPN12-216ENST00000523952 NIPA1Q7RTP0 329 aa10.52□□□□□ -0.73
PTPN12-216ENST00000523952 ZNF598Q86UK7 904 aaKnown RBP10.52□□□□□ -0.73
PTPN12-216ENST00000523952 SMAP1Q8IYB5 467 aaPredicted RBP10.52□□□□□ -0.73
PTPN12-216ENST00000523952 PJA1Q8NG27 643 aa10.52□□□□□ -0.73
PTPN12-216ENST00000523952 LPPQ93052 612 aa10.52□□□□□ -0.73
PTPN12-216ENST00000523952 PGBD4Q96DM1 585 aa10.52□□□□□ -0.73
PTPN12-216ENST00000523952 FOXQ1Q9C009 403 aa10.52□□□□□ -0.73
PTPN12-216ENST00000523952 ADAMTS10Q9H324 1103 aa10.52□□□□□ -0.73
PTPN12-216ENST00000523952 NRDE2Q9H7Z3 1164 aa10.52□□□□□ -0.73
PTPN12-216ENST00000523952 WDR6Q9NNW5 1121 aaKnown RBP10.52□□□□□ -0.73
PTPN12-216ENST00000523952 RIC8AQ9NPQ8 531 aa10.52□□□□□ -0.73
PTPN12-216ENST00000523952 CHST12Q9NRB3 414 aa10.52□□□□□ -0.73
PTPN12-216ENST00000523952 NRBP2Q9NSY0 501 aa10.52□□□□□ -0.73
PTPN12-216ENST00000523952 TBC1D22BQ9NU19 505 aa10.52□□□□□ -0.73
PTPN12-216ENST00000523952 TBC1D13Q9NVG8 400 aa10.52□□□□□ -0.73
PTPN12-216ENST00000523952 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.52□□□□□ -0.735e-9■■■■■ 62.4
PTPN12-216ENST00000523952 PIN4Q9Y237 131 aaKnown RBP10.52□□□□□ -0.73
PTPN12-216ENST00000523952 PCDHB13Q9Y5F0 798 aa10.52□□□□□ -0.73
PTPN12-216ENST00000523952 PCDHA10Q9Y5I2 948 aa10.52□□□□□ -0.73
PTPN12-216ENST00000523952 SLC12A7Q9Y666 1083 aa10.52□□□□□ -0.73
PTPN12-216ENST00000523952 GREB1Q4ZG55 1949 aa10.51□□□□□ -0.73
PTPN12-216ENST00000523952 TICRRQ7Z2Z1 1910 aa10.51□□□□□ -0.73
PTPN12-216ENST00000523952 PRC1O43663 620 aa10.51□□□□□ -0.73
PTPN12-216ENST00000523952 GLUD1P00367 558 aa10.51□□□□□ -0.73
PTPN12-216ENST00000523952 ALDH2P05091 517 aa10.51□□□□□ -0.73
PTPN12-216ENST00000523952 MCM5P33992 734 aa10.51□□□□□ -0.73
PTPN12-216ENST00000523952 SLC11A1P49279 550 aa10.51□□□□□ -0.73
PTPN12-216ENST00000523952 DNM2P50570 870 aa10.51□□□□□ -0.73
PTPN12-216ENST00000523952 RAB27AP51159 221 aa10.51□□□□□ -0.73
PTPN12-216ENST00000523952 ATXN1P54253 815 aaKnown RBP10.51□□□□□ -0.73
PTPN12-216ENST00000523952 ANTXR2P58335 489 aa10.51□□□□□ -0.73
PTPN12-216ENST00000523952 CDC42EP1Q00587 391 aa10.51□□□□□ -0.73
PTPN12-216ENST00000523952 CSTF1Q05048 431 aaKnown RBP10.51□□□□□ -0.73
PTPN12-216ENST00000523952 AP3B2Q13367 1082 aa10.51□□□□□ -0.73
PTPN12-216ENST00000523952 UBXN2BQ14CS0 331 aa10.51□□□□□ -0.73
PTPN12-216ENST00000523952 ZNF746Q6NUN9 644 aaPredicted RBP10.51□□□□□ -0.73
PTPN12-216ENST00000523952 PPP1R18Q6NYC8 613 aa10.51□□□□□ -0.73
PTPN12-216ENST00000523952 RAB11FIP4Q86YS3 637 aa10.51□□□□□ -0.73
PTPN12-216ENST00000523952 SUMF1Q8NBK3 374 aa10.51□□□□□ -0.73
PTPN12-216ENST00000523952 CMASQ8NFW8 434 aaPredicted RBP10.51□□□□□ -0.73
PTPN12-216ENST00000523952 FEZF2Q8TBJ5 459 aa10.51□□□□□ -0.73
PTPN12-216ENST00000523952 TMEM87BQ96K49 555 aa10.51□□□□□ -0.73
PTPN12-216ENST00000523952 RTKNQ9BST9 563 aa10.51□□□□□ -0.73
PTPN12-216ENST00000523952 INO80BQ9C086 356 aaPredicted RBP10.51□□□□□ -0.73
PTPN12-216ENST00000523952 GLT8D2Q9H1C3 349 aa10.51□□□□□ -0.73
PTPN12-216ENST00000523952 EPS15L1Q9UBC2 864 aa10.51□□□□□ -0.73
PTPN12-216ENST00000523952 DNAJB4Q9UDY4 337 aa10.51□□□□□ -0.73
PTPN12-216ENST00000523952 GMEB2Q9UKD1 530 aa10.51□□□□□ -0.73
PTPN12-216ENST00000523952 RAB23Q9ULC3 237 aa10.51□□□□□ -0.73
PTPN12-216ENST00000523952 FAN1Q9Y2M0 1017 aa10.51□□□□□ -0.73
PTPN12-216ENST00000523952 MAFBQ9Y5Q3 323 aaPredicted RBP10.51□□□□□ -0.73
PTPN12-216ENST00000523952 SPAG17Q6Q759 2223 aa10.5□□□□□ -0.73
PTPN12-216ENST00000523952 CHD8Q9HCK8 2581 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms