RNA–Protein interactions for RNA: ENST00000523066.1

DENND3-220, Transcript of DENN domain containing 3, humanhuman

TSL 4

Gene DENND3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-220ENST00000523066 SP7Q8TDD2 431 aaPredicted RBP11.66□□□□□ -0.54
DENND3-220ENST00000523066 ZNF689Q96CS4 500 aaPredicted RBP11.66□□□□□ -0.54
DENND3-220ENST00000523066 EPSTI1Q96J88 318 aa11.66□□□□□ -0.54
DENND3-220ENST00000523066 RC3H2Q9HBD1 1191 aaKnown RBP11.66□□□□□ -0.54
DENND3-220ENST00000523066 WDR70Q9NW82 654 aa11.66□□□□□ -0.54
DENND3-220ENST00000523066 HCSTQ9UBK5 93 aa11.66□□□□□ -0.54
DENND3-220ENST00000523066 USP20Q9Y2K6 914 aa11.66□□□□□ -0.54
DENND3-220ENST00000523066 NPHP3-ACAD11A0A0J9YXS1 232 aa11.65□□□□□ -0.54
DENND3-220ENST00000523066 LRRIQ4A6NIV6 560 aa11.65□□□□□ -0.54
DENND3-220ENST00000523066 TTLL13PA6NNM8 815 aa11.65□□□□□ -0.54
DENND3-220ENST00000523066 ASAP2O43150 1006 aa11.65□□□□□ -0.54
DENND3-220ENST00000523066 BMP15O95972 392 aa11.65□□□□□ -0.54
DENND3-220ENST00000523066 SSBP05455 408 aaKnown RBP eCLIP11.65□□□□□ -0.54
DENND3-220ENST00000523066 ZSCAN20P17040 1043 aaPredicted RBP11.65□□□□□ -0.54
DENND3-220ENST00000523066 ATF7P17544 494 aaPredicted RBP11.65□□□□□ -0.54
DENND3-220ENST00000523066 NASPP49321 788 aaPredicted RBP11.65□□□□□ -0.54
DENND3-220ENST00000523066 PTENP60484 403 aa11.65□□□□□ -0.54
DENND3-220ENST00000523066 RAD51AP2Q09MP3 1159 aa11.65□□□□□ -0.54
DENND3-220ENST00000523066 SLC39A14Q15043 492 aa11.65□□□□□ -0.54
DENND3-220ENST00000523066 ODR4Q5SWX8 454 aa11.65□□□□□ -0.54
DENND3-220ENST00000523066 RINT1Q6NUQ1 792 aa11.65□□□□□ -0.54
DENND3-220ENST00000523066 SLC24A5Q71RS6 500 aa11.65□□□□□ -0.54
DENND3-220ENST00000523066 SRGAP1Q7Z6B7 1085 aa11.65□□□□□ -0.54
DENND3-220ENST00000523066 NPAS4Q8IUM7 802 aa11.65□□□□□ -0.54
DENND3-220ENST00000523066 LINC00301Q8NCQ3 95 aa11.65□□□□□ -0.54
DENND3-220ENST00000523066 CPB2Q96IY4 423 aa11.65□□□□□ -0.54
DENND3-220ENST00000523066 KIFC3Q9BVG8 833 aa11.65□□□□□ -0.54
DENND3-220ENST00000523066 RNF19AQ9NV58 838 aa11.65□□□□□ -0.54
DENND3-220ENST00000523066 DNM3Q9UQ16 869 aa11.65□□□□□ -0.54
DENND3-220ENST00000523066 PIN4Q9Y237 131 aaKnown RBP11.65□□□□□ -0.54
DENND3-220ENST00000523066 SRPRBQ9Y5M8 271 aaKnown RBP11.65□□□□□ -0.54
DENND3-220ENST00000523066 ADGRA3Q8IWK6 1321 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 PLXNA4Q9HCM2 1894 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 MEIS3P2A8K0S8 358 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 SFI1A8K8P3 1242 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 INO80B-WBP1J3KQ70 363 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 B4GALT5O43286 388 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 GALR2O43603 387 aaPredicted RBP11.64□□□□□ -0.55
DENND3-220ENST00000523066 HIP1RO75146 1068 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 EDN1P05305 212 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 LINC00271P0C7V0 271 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 PLCG1P19174 1290 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 SFPQP23246 707 aaKnown RBP eCLIP11.64□□□□□ -0.55
DENND3-220ENST00000523066 HOXA11P31270 313 aaPredicted RBP11.64□□□□□ -0.55
DENND3-220ENST00000523066 LONP1P36776 959 aaKnown RBP11.64□□□□□ -0.55
DENND3-220ENST00000523066 UBA7P41226 1012 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 PHKA2P46019 1235 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 SLC12A3P55017 1021 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 FAM189BP81408 668 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 CDC42EP1Q00587 391 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 MBTD1Q05BQ5 628 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 MAPK7Q13164 816 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 DHX8Q14562 1220 aaKnown RBP11.64□□□□□ -0.55
DENND3-220ENST00000523066 MCM6Q14566 821 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 MXD4Q14582 209 aaPredicted RBP11.64□□□□□ -0.55
DENND3-220ENST00000523066 STK38Q15208 465 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 AMHR2Q16671 573 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 C1orf186Q6ZWK4 172 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 CDR2LQ86X02 465 aaPredicted RBP11.64□□□□□ -0.55
DENND3-220ENST00000523066 ECHDC2Q86YB7 292 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 DAW1Q8N136 415 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 ZNF710Q8N1W2 664 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 RNF169Q8NCN4 708 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 MCPH1Q8NEM0 835 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 GDPD5Q8WTR4 605 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 SYMPKQ92797 1274 aaKnown RBP11.64□□□□□ -0.55
DENND3-220ENST00000523066 LPPQ93052 612 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 CDK5RAP3Q96JB5 506 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 AK8Q96MA6 479 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 INO80BQ9C086 356 aaPredicted RBP11.64□□□□□ -0.55
DENND3-220ENST00000523066 C1orf112Q9NSG2 853 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 BLOC1S4Q9NUP1 217 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 AGPAT5Q9NUQ2 364 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 LRFN2Q9ULH4 789 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 PCDHB7Q9Y5E2 793 aa11.64□□□□□ -0.55
DENND3-220ENST00000523066 MRPL42Q9Y6G3 142 aaKnown RBP11.64□□□□□ -0.55
DENND3-220ENST00000523066 A0A087X0B3 334 aa11.63□□□□□ -0.55
DENND3-220ENST00000523066 TSPAN1O60635 241 aa11.63□□□□□ -0.55
DENND3-220ENST00000523066 LPXNO60711 386 aa11.63□□□□□ -0.55
DENND3-220ENST00000523066 PLA2G4BP0C869 781 aa11.63□□□□□ -0.55
DENND3-220ENST00000523066 STAG3L1P0CL83 205 aa11.63□□□□□ -0.55
DENND3-220ENST00000523066 FOSL2P15408 326 aa11.63□□□□□ -0.55
DENND3-220ENST00000523066 LIG1P18858 919 aa11.63□□□□□ -0.55
DENND3-220ENST00000523066 IGFBP4P22692 258 aa11.63□□□□□ -0.55
DENND3-220ENST00000523066 ERVK-21P61565 698 aa11.63□□□□□ -0.55
DENND3-220ENST00000523066 DNM1Q05193 864 aaKnown RBP11.63□□□□□ -0.55
DENND3-220ENST00000523066 TFDP1Q14186 410 aa11.63□□□□□ -0.55
DENND3-220ENST00000523066 BTG3Q14201 252 aaPredicted RBP11.63□□□□□ -0.55
DENND3-220ENST00000523066 TPRNQ4KMQ1 711 aa11.63□□□□□ -0.55
DENND3-220ENST00000523066 ARSHQ5FYA8 562 aa11.63□□□□□ -0.55
DENND3-220ENST00000523066 CLLU1OSQ5K130 101 aa11.63□□□□□ -0.55
DENND3-220ENST00000523066 UBXN11Q5T124 520 aa11.63□□□□□ -0.55
DENND3-220ENST00000523066 TWF2Q6IBS0 349 aaKnown RBP11.63□□□□□ -0.55
DENND3-220ENST00000523066 FIBCD1Q8N539 461 aa11.63□□□□□ -0.55
DENND3-220ENST00000523066 SYT2Q8N9I0 419 aaPredicted RBP11.63□□□□□ -0.55
DENND3-220ENST00000523066 CALML4Q96GE6 196 aa11.63□□□□□ -0.55
DENND3-220ENST00000523066 ZNF396Q96N95 335 aaPredicted RBP11.63□□□□□ -0.55
DENND3-220ENST00000523066 TGS1Q96RS0 853 aaKnown RBP11.63□□□□□ -0.55
DENND3-220ENST00000523066 EIF2AQ9BY44 585 aaKnown RBP11.63□□□□□ -0.55
DENND3-220ENST00000523066 PANK2Q9BZ23 570 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms