RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 ANTXR1Q9H6X2 564 aa7.99□□□□□ -1.13
SDCBP-210ENST00000522843 SPC25Q9HBM1 224 aa7.99□□□□□ -1.13
SDCBP-210ENST00000522843 ABCB6Q9NP58 842 aa7.99□□□□□ -1.13
SDCBP-210ENST00000522843 KRT82Q9NSB4 513 aa7.99□□□□□ -1.13
SDCBP-210ENST00000522843 PCDHGC5Q9Y5F6 944 aa7.99□□□□□ -1.13
SDCBP-210ENST00000522843 ZFHX4Q86UP3 3567 aa7.99□□□□□ -1.13
SDCBP-210ENST00000522843 RIF1Q5UIP0 2472 aaKnown RBP7.98□□□□□ -1.13
SDCBP-210ENST00000522843 TANC1Q9C0D5 1861 aa7.98□□□□□ -1.13
SDCBP-210ENST00000522843 CABYRO75952 493 aa7.98□□□□□ -1.13
SDCBP-210ENST00000522843 CFPP27918 469 aa7.98□□□□□ -1.13
SDCBP-210ENST00000522843 TNFAIP2Q03169 654 aa7.98□□□□□ -1.13
SDCBP-210ENST00000522843 FSCN1Q16658 493 aaKnown RBP7.98□□□□□ -1.13
SDCBP-210ENST00000522843 TNNI3KQ59H18 835 aa7.98□□□□□ -1.13
SDCBP-210ENST00000522843 FAM83BQ5T0W9 1011 aa7.98□□□□□ -1.13
SDCBP-210ENST00000522843 SNRNP48Q6IEG0 339 aaKnown RBP7.98□□□□□ -1.13
SDCBP-210ENST00000522843 TLK2Q86UE8 772 aa7.98□□□□□ -1.13
SDCBP-210ENST00000522843 PPP1R13LQ8WUF5 828 aa7.98□□□□□ -1.13
SDCBP-210ENST00000522843 DDX11Q96FC9 970 aa7.98□□□□□ -1.13
SDCBP-210ENST00000522843 ZNF512BQ96KM6 892 aaPredicted RBP7.98□□□□□ -1.13
SDCBP-210ENST00000522843 NUP88Q99567 741 aaPredicted RBP7.98□□□□□ -1.13
SDCBP-210ENST00000522843 TEX13BQ9BXU2 312 aa7.98□□□□□ -1.13
SDCBP-210ENST00000522843 PDGFCQ9NRA1 345 aa7.98□□□□□ -1.13
SDCBP-210ENST00000522843 FAM86C1Q9NVL1 165 aa7.98□□□□□ -1.13
SDCBP-210ENST00000522843 MTUS1Q9ULD2 1270 aa7.98□□□□□ -1.13
SDCBP-210ENST00000522843 FPGT-TNNI3KV9GXZ4 949 aa7.98□□□□□ -1.13
SDCBP-210ENST00000522843 ZNF536O15090 1300 aa7.98□□□□□ -1.13
SDCBP-210ENST00000522843 MYO7AQ13402 2215 aa7.98□□□□□ -1.13
SDCBP-210ENST00000522843 SIP14410 1827 aa7.97□□□□□ -1.13
SDCBP-210ENST00000522843 IGSF3O75054 1194 aa7.97□□□□□ -1.13
SDCBP-210ENST00000522843 IDH1O75874 414 aaKnown RBP7.97□□□□□ -1.13
SDCBP-210ENST00000522843 GSTP1P09211 210 aaKnown RBP7.97□□□□□ -1.13
SDCBP-210ENST00000522843 IQCF3P0C7M6 154 aa7.97□□□□□ -1.13
SDCBP-210ENST00000522843 EEF2P13639 858 aaKnown RBP7.97□□□□□ -1.13
SDCBP-210ENST00000522843 COPB2P35606 906 aa7.97□□□□□ -1.13
SDCBP-210ENST00000522843 ERVK-21P61565 698 aa7.97□□□□□ -1.13
SDCBP-210ENST00000522843 DEFB103AP81534 67 aa7.97□□□□□ -1.13
SDCBP-210ENST00000522843 CNTN2Q02246 1040 aa7.97□□□□□ -1.13
SDCBP-210ENST00000522843 ASB11Q8WXH4 323 aa7.97□□□□□ -1.13
SDCBP-210ENST00000522843 GPR108Q9NPR9 543 aa7.97□□□□□ -1.13
SDCBP-210ENST00000522843 PRDM7Q9NQW5 492 aa7.97□□□□□ -1.13
SDCBP-210ENST00000522843 MCM9Q9NXL9 1143 aa7.97□□□□□ -1.13
SDCBP-210ENST00000522843 MUTYHQ9UIF7 546 aa7.97□□□□□ -1.13
SDCBP-210ENST00000522843 DBNLQ9UJU6 430 aaKnown RBP7.97□□□□□ -1.13
SDCBP-210ENST00000522843 NOB1Q9ULX3 412 aaKnown RBP7.97□□□□□ -1.13
SDCBP-210ENST00000522843 PLXNA3P51805 1871 aa7.97□□□□□ -1.13
SDCBP-210ENST00000522843 KMT2EQ8IZD2 1858 aa7.97□□□□□ -1.13
SDCBP-210ENST00000522843 TNKSO95271 1327 aa7.97□□□□□ -1.13
SDCBP-210ENST00000522843 CACNA1BQ00975 2339 aa7.96□□□□□ -1.13
SDCBP-210ENST00000522843 FAM186AA6NE01 2351 aa7.96□□□□□ -1.13
SDCBP-210ENST00000522843 MYH8P13535 1937 aa7.96□□□□□ -1.13
SDCBP-210ENST00000522843 TMEM238LA0A1B0GVL6 79 aa7.96□□□□□ -1.14
SDCBP-210ENST00000522843 LINC01553A4QN01 128 aa7.96□□□□□ -1.14
SDCBP-210ENST00000522843 ATP2A1O14983 1001 aa7.96□□□□□ -1.14
SDCBP-210ENST00000522843 ACTN1P12814 892 aa7.96□□□□□ -1.14
SDCBP-210ENST00000522843 ITIH2P19823 946 aa7.96□□□□□ -1.14
SDCBP-210ENST00000522843 RFC2P35250 354 aa7.96□□□□□ -1.14
SDCBP-210ENST00000522843 WDR5P61964 334 aaKnown RBP7.96□□□□□ -1.14
SDCBP-210ENST00000522843 GRM2Q14416 872 aa7.96□□□□□ -1.14
SDCBP-210ENST00000522843 CCDC158Q5M9N0 1113 aa7.96□□□□□ -1.14
SDCBP-210ENST00000522843 TAPT1Q6NXT6 567 aa7.96□□□□□ -1.14
SDCBP-210ENST00000522843 TOP6BLQ8N6T0 577 aa7.96□□□□□ -1.14
SDCBP-210ENST00000522843 FAM133AQ8N9E0 248 aa7.96□□□□□ -1.14
SDCBP-210ENST00000522843 ZSCAN18Q8TBC5 510 aaPredicted RBP7.96□□□□□ -1.14
SDCBP-210ENST00000522843 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.96□□□□□ -1.14
SDCBP-210ENST00000522843 SDR42E1Q8WUS8 393 aa7.96□□□□□ -1.14
SDCBP-210ENST00000522843 CTAGE1Q96RT6 745 aa7.96□□□□□ -1.14
SDCBP-210ENST00000522843 PPP1R16BQ96T49 567 aa7.96□□□□□ -1.14
SDCBP-210ENST00000522843 SLF1Q9BQI6 1058 aa7.96□□□□□ -1.14
SDCBP-210ENST00000522843 SEZ6LQ9BYH1 1024 aa7.96□□□□□ -1.14
SDCBP-210ENST00000522843 RAVER2Q9HCJ3 691 aaKnown RBP7.96□□□□□ -1.14
SDCBP-210ENST00000522843 MRS2Q9HD23 443 aa7.96□□□□□ -1.14
SDCBP-210ENST00000522843 SSU72Q9NP77 194 aaKnown RBP7.96□□□□□ -1.14
SDCBP-210ENST00000522843 DCP1AQ9NPI6 582 aaPredicted RBP7.96□□□□□ -1.14
SDCBP-210ENST00000522843 DCTN4Q9UJW0 460 aa7.96□□□□□ -1.14
SDCBP-210ENST00000522843 SCN10AQ9Y5Y9 1956 aa7.96□□□□□ -1.14
SDCBP-210ENST00000522843 GREB1LQ9C091 1923 aaPredicted RBP7.95□□□□□ -1.14
SDCBP-210ENST00000522843 VPS13AQ96RL7 3174 aa7.95□□□□□ -1.14
SDCBP-210ENST00000522843 CYP2D7A0A087X1C5 515 aa7.95□□□□□ -1.14
SDCBP-210ENST00000522843 KIF28PB7ZC32 967 aa7.95□□□□□ -1.14
SDCBP-210ENST00000522843 TSPAN15O95858 294 aa7.95□□□□□ -1.14
SDCBP-210ENST00000522843 LTBRP36941 435 aa7.95□□□□□ -1.14
SDCBP-210ENST00000522843 G3BP1Q13283 466 aaKnown RBP eCLIP7.95□□□□□ -1.14
SDCBP-210ENST00000522843 ALDH1L2Q3SY69 923 aa7.95□□□□□ -1.14
SDCBP-210ENST00000522843 HERC4Q5GLZ8 1057 aaPredicted RBP7.95□□□□□ -1.14
SDCBP-210ENST00000522843 NOL8Q76FK4 1167 aaKnown RBP7.95□□□□□ -1.14
SDCBP-210ENST00000522843 BMP8AQ7Z5Y6 402 aa7.95□□□□□ -1.14
SDCBP-210ENST00000522843 ADHFE1Q8IWW8 467 aa7.95□□□□□ -1.14
SDCBP-210ENST00000522843 CPXCR1Q8N123 301 aa7.95□□□□□ -1.14
SDCBP-210ENST00000522843 ANKRD35Q8N283 1001 aa7.95□□□□□ -1.14
SDCBP-210ENST00000522843 LCORLQ8N3X6 602 aa7.95□□□□□ -1.14
SDCBP-210ENST00000522843 HEXIM2Q96MH2 286 aaKnown RBP7.95□□□□□ -1.14
SDCBP-210ENST00000522843 TGS1Q96RS0 853 aaKnown RBP7.95□□□□□ -1.14
SDCBP-210ENST00000522843 C17orf80Q9BSJ5 609 aa7.95□□□□□ -1.14
SDCBP-210ENST00000522843 SH2D4AQ9H788 454 aa7.95□□□□□ -1.14
SDCBP-210ENST00000522843 SMC4Q9NTJ3 1288 aa7.95□□□□□ -1.14
SDCBP-210ENST00000522843 GVINP1Q7Z2Y8 2422 aa7.95□□□□□ -1.14
SDCBP-210ENST00000522843 LCTP09848 1927 aa7.95□□□□□ -1.14
SDCBP-210ENST00000522843 ATG2AQ2TAZ0 1938 aa7.95□□□□□ -1.14
SDCBP-210ENST00000522843 TRIP12Q14669 1992 aaPredicted RBP7.95□□□□□ -1.14
SDCBP-210ENST00000522843 EPG5Q9HCE0 2579 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms