RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 PCDHA12Q9UN75 941 aa11.45□□□□□ -0.58
CTNNA1-235ENST00000522730 COL4A3BPQ9Y5P4 624 aa11.45□□□□□ -0.58
CTNNA1-235ENST00000522730 HIDE1A8MVS5 230 aa11.44□□□□□ -0.58
CTNNA1-235ENST00000522730 TBX3O15119 743 aa11.44□□□□□ -0.58
CTNNA1-235ENST00000522730 ZC3H11AO75152 810 aaKnown RBP eCLIP11.44□□□□□ -0.58
CTNNA1-235ENST00000522730 SLITRK3O94933 977 aa11.44□□□□□ -0.58
CTNNA1-235ENST00000522730 PHKA2P46019 1235 aa11.44□□□□□ -0.58
CTNNA1-235ENST00000522730 LAMTOR4Q0VGL1 99 aa11.44□□□□□ -0.58
CTNNA1-235ENST00000522730 SMAD4Q13485 552 aaKnown RBP11.44□□□□□ -0.58
CTNNA1-235ENST00000522730 SMAD2Q15796 467 aaKnown RBP11.44□□□□□ -0.58
CTNNA1-235ENST00000522730 CALCRLQ16602 461 aa11.44□□□□□ -0.58
CTNNA1-235ENST00000522730 ZNF410Q86VK4 478 aa11.44□□□□□ -0.58
CTNNA1-235ENST00000522730 DIS3L2Q8IYB7 885 aaKnown RBP11.44□□□□□ -0.58
CTNNA1-235ENST00000522730 SLFN12Q8IYM2 578 aa11.44□□□□□ -0.58
CTNNA1-235ENST00000522730 NSUN7Q8NE18 718 aaKnown RBP11.44□□□□□ -0.58
CTNNA1-235ENST00000522730 PSPC1Q8WXF1 523 aaKnown RBP11.44□□□□□ -0.58
CTNNA1-235ENST00000522730 CCDC43Q96MW1 224 aaKnown RBP11.44□□□□□ -0.58
CTNNA1-235ENST00000522730 ZSWIM4Q9H7M6 989 aa11.44□□□□□ -0.58
CTNNA1-235ENST00000522730 PRKAG3Q9UGI9 489 aa11.44□□□□□ -0.58
CTNNA1-235ENST00000522730 FARP1Q9Y4F1 1045 aaPredicted RBP11.44□□□□□ -0.58
CTNNA1-235ENST00000522730 MEIS3P2A8K0S8 358 aa11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 DCXO43602 365 aa11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 EIF5BO60841 1220 aaKnown RBP11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 GPR37L1O60883 481 aa11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 CXCL14O95715 111 aa11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 GLP2RO95838 553 aa11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 ATF7P17544 494 aaPredicted RBP11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 RFC5P40937 340 aa11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 TECP42680 631 aa11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 BCAR1P56945 870 aa11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 PLCB3Q01970 1234 aa11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 EMC2Q15006 297 aa11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 SAFBQ15424 915 aaKnown RBP eCLIP11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 DUSP6Q16828 381 aa11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 C8orf34Q49A92 452 aa11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 PDE12Q6L8Q7 609 aaKnown RBP11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 GLB1LQ6UWU2 654 aa11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 MAEAQ7L5Y9 396 aa11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 ZNF598Q86UK7 904 aaKnown RBP11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 CCDC83Q8IWF9 413 aa11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 C4orf19Q8IY42 314 aa11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 EXOC8Q8IYI6 725 aa11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 RNF149Q8NC42 400 aa11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 VN1R2Q8NFZ6 395 aa11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 TCP11Q8WWU5 503 aa11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 MSLNLQ96KJ4 702 aa11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 RPGRIP1Q96KN7 1286 aa11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 POP1Q99575 1024 aaKnown RBP11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 EIF2AK1Q9BQI3 630 aaKnown RBP11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 TTC12Q9H892 705 aaPredicted RBP11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 MINDY3Q9H8M7 445 aa11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 IFT122Q9HBG6 1241 aa11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 C11orf16Q9NQ32 467 aa11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 FAM105AQ9NUU6 356 aa11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 MUTYHQ9UIF7 546 aa11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 PCDHB2Q9Y5E7 798 aa11.43□□□□□ -0.58
CTNNA1-235ENST00000522730 C19orf67A6NJJ6 358 aa11.42□□□□□ -0.58
CTNNA1-235ENST00000522730 FSCN2O14926 492 aa11.42□□□□□ -0.58
CTNNA1-235ENST00000522730 NEMFO60524 1076 aa11.42□□□□□ -0.58
CTNNA1-235ENST00000522730 SKIP12755 728 aa11.42□□□□□ -0.58
CTNNA1-235ENST00000522730 MCM7P33993 719 aa11.42□□□□□ -0.58
CTNNA1-235ENST00000522730 PPM1AP35813 382 aa11.42□□□□□ -0.58
CTNNA1-235ENST00000522730 NOMO2Q5JPE7 1267 aa11.42□□□□□ -0.58
CTNNA1-235ENST00000522730 RNF135Q8IUD6 432 aa11.42□□□□□ -0.58
CTNNA1-235ENST00000522730 SLC39A11Q8N1S5 342 aa11.42□□□□□ -0.58
CTNNA1-235ENST00000522730 PIGOQ8TEQ8 1089 aa11.42□□□□□ -0.58
CTNNA1-235ENST00000522730 AUTS2Q8WXX7 1259 aa11.42□□□□□ -0.58
CTNNA1-235ENST00000522730 TNFRSF25Q93038 417 aa11.42□□□□□ -0.58
CTNNA1-235ENST00000522730 PGBD4Q96DM1 585 aa11.42□□□□□ -0.58
CTNNA1-235ENST00000522730 FAM122AQ96E09 287 aa11.42□□□□□ -0.58
CTNNA1-235ENST00000522730 TMEM169Q96HH4 297 aa11.42□□□□□ -0.58
CTNNA1-235ENST00000522730 FAM193BQ96PV7 902 aaPredicted RBP11.42□□□□□ -0.58
CTNNA1-235ENST00000522730 MTRQ99707 1265 aa11.42□□□□□ -0.58
CTNNA1-235ENST00000522730 MRPL9Q9BYD2 267 aaKnown RBP11.42□□□□□ -0.58
CTNNA1-235ENST00000522730 DHX33Q9H6R0 707 aaKnown RBP11.42□□□□□ -0.58
CTNNA1-235ENST00000522730 NGRNQ9NPE2 291 aaKnown RBP11.42□□□□□ -0.58
CTNNA1-235ENST00000522730 LIMCH1Q9UPQ0 1083 aa11.42□□□□□ -0.58
CTNNA1-235ENST00000522730 LZTS1Q9Y250 596 aa11.42□□□□□ -0.58
CTNNA1-235ENST00000522730 HCN4Q9Y3Q4 1203 aa11.42□□□□□ -0.58
CTNNA1-235ENST00000522730 USP15Q9Y4E8 981 aaPredicted RBP11.42□□□□□ -0.58
CTNNA1-235ENST00000522730 FNDC1Q4ZHG4 1894 aaPredicted RBP11.42□□□□□ -0.58
CTNNA1-235ENST00000522730 WDR81Q562E7 1941 aa11.41□□□□□ -0.58
CTNNA1-235ENST00000522730 WNT7AO00755 349 aa11.41□□□□□ -0.58
CTNNA1-235ENST00000522730 ASAP2O43150 1006 aa11.41□□□□□ -0.58
CTNNA1-235ENST00000522730 OFD1O75665 1012 aa11.41□□□□□ -0.58
CTNNA1-235ENST00000522730 ERLIN2O94905 339 aa11.41□□□□□ -0.58
CTNNA1-235ENST00000522730 EYA4O95677 639 aa11.41□□□□□ -0.58
CTNNA1-235ENST00000522730 POMCP01189 267 aa11.41□□□□□ -0.58
CTNNA1-235ENST00000522730 SRGAP2BP0DMP2 458 aa11.41□□□□□ -0.58
CTNNA1-235ENST00000522730 SP100P23497 879 aaPredicted RBP11.41□□□□□ -0.58
CTNNA1-235ENST00000522730 SPIRE1Q08AE8 756 aa11.41□□□□□ -0.58
CTNNA1-235ENST00000522730 NCBP1Q09161 790 aaKnown RBP11.41□□□□□ -0.58
CTNNA1-235ENST00000522730 COASYQ13057 564 aa11.41□□□□□ -0.58
CTNNA1-235ENST00000522730 GNL2Q13823 731 aaKnown RBP11.41□□□□□ -0.58
CTNNA1-235ENST00000522730 SMC1AQ14683 1233 aaKnown RBP11.41□□□□□ -0.58
CTNNA1-235ENST00000522730 BMS1Q14692 1282 aaKnown RBP11.41□□□□□ -0.58
CTNNA1-235ENST00000522730 ZNF174Q15697 407 aa11.41□□□□□ -0.58
CTNNA1-235ENST00000522730 SRGAP1Q7Z6B7 1085 aa11.41□□□□□ -0.58
CTNNA1-235ENST00000522730 FERMT3Q86UX7 667 aa11.41□□□□□ -0.58
CTNNA1-235ENST00000522730 VPS52Q8N1B4 723 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms