RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 CPB2Q96IY4 423 aa19.82■□□□□ 0.76
CLK4-211ENST00000522556 FBXO2Q9UK22 296 aaPredicted RBP19.82■□□□□ 0.76
CLK4-211ENST00000522556 USP20Q9Y2K6 914 aa19.82■□□□□ 0.76
CLK4-211ENST00000522556 LRRIQ4A6NIV6 560 aa19.81■□□□□ 0.76
CLK4-211ENST00000522556 TTLL13PA6NNM8 815 aa19.81■□□□□ 0.76
CLK4-211ENST00000522556 INO80B-WBP1J3KQ70 363 aa19.81■□□□□ 0.76
CLK4-211ENST00000522556 CSPG5O95196 566 aa19.81■□□□□ 0.76
CLK4-211ENST00000522556 EYA4O95677 639 aa19.81■□□□□ 0.76
CLK4-211ENST00000522556 HSP90AA1P07900 732 aaKnown RBP19.81■□□□□ 0.76
CLK4-211ENST00000522556 MXD4Q14582 209 aaPredicted RBP19.81■□□□□ 0.76
CLK4-211ENST00000522556 FOXD4L6Q3SYB3 417 aaPredicted RBP19.81■□□□□ 0.76
CLK4-211ENST00000522556 UBXN11Q5T124 520 aa19.81■□□□□ 0.76
CLK4-211ENST00000522556 FOXD4L3Q6VB84 417 aaPredicted RBP19.81■□□□□ 0.76
CLK4-211ENST00000522556 CABP7Q86V35 215 aa19.81■□□□□ 0.76
CLK4-211ENST00000522556 CDR2LQ86X02 465 aaPredicted RBP19.81■□□□□ 0.76
CLK4-211ENST00000522556 IFNLR1Q8IU57 520 aaPredicted RBP19.81■□□□□ 0.76
CLK4-211ENST00000522556 DAW1Q8N136 415 aa19.81■□□□□ 0.76
CLK4-211ENST00000522556 MCPH1Q8NEM0 835 aa19.81■□□□□ 0.76
CLK4-211ENST00000522556 CLIC6Q96NY7 704 aa19.81■□□□□ 0.76
CLK4-211ENST00000522556 INO80BQ9C086 356 aaPredicted RBP19.81■□□□□ 0.76
CLK4-211ENST00000522556 A0A0U1RQF3 1178 aa19.8■□□□□ 0.76
CLK4-211ENST00000522556 ASAP2O43150 1006 aa19.8■□□□□ 0.76
CLK4-211ENST00000522556 MAPK7Q13164 816 aa19.8■□□□□ 0.76
CLK4-211ENST00000522556 KARSQ15046 597 aaKnown RBP19.8■□□□□ 0.76
CLK4-211ENST00000522556 LRRC55Q6ZSA7 311 aa19.8■□□□□ 0.76
CLK4-211ENST00000522556 HELQQ8TDG4 1101 aa19.8■□□□□ 0.76
CLK4-211ENST00000522556 CLP1Q92989 425 aaKnown RBP19.8■□□□□ 0.76
CLK4-211ENST00000522556 CASD1Q96PB1 797 aa19.8■□□□□ 0.76
CLK4-211ENST00000522556 CSRNP2Q9H175 543 aa19.8■□□□□ 0.76
CLK4-211ENST00000522556 ELAC1Q9H777 363 aaKnown RBP19.8■□□□□ 0.76
CLK4-211ENST00000522556 FAM105AQ9NUU6 356 aa19.8■□□□□ 0.76
CLK4-211ENST00000522556 RAD51AP2Q09MP3 1159 aa19.79■□□□□ 0.76
CLK4-211ENST00000522556 TFDP1Q14186 410 aa19.79■□□□□ 0.76
CLK4-211ENST00000522556 RINT1Q6NUQ1 792 aa19.79■□□□□ 0.76
CLK4-211ENST00000522556 EPSTI1Q96J88 318 aa19.79■□□□□ 0.76
CLK4-211ENST00000522556 CHAMP1Q96JM3 812 aa19.79■□□□□ 0.76
CLK4-211ENST00000522556 EIF2AQ9BY44 585 aaKnown RBP19.79■□□□□ 0.76
CLK4-211ENST00000522556 DNM3Q9UQ16 869 aa19.79■□□□□ 0.76
CLK4-211ENST00000522556 MYH11P35749 1972 aa19.79■□□□□ 0.76
CLK4-211ENST00000522556 NPHP3-ACAD11A0A0J9YXS1 232 aa19.78■□□□□ 0.76
CLK4-211ENST00000522556 GRM6O15303 877 aa19.78■□□□□ 0.76
CLK4-211ENST00000522556 HIP1RO75146 1068 aa19.78■□□□□ 0.76
CLK4-211ENST00000522556 BMP15O95972 392 aa19.78■□□□□ 0.76
CLK4-211ENST00000522556 SSBP05455 408 aaKnown RBP eCLIP19.78■□□□□ 0.76
CLK4-211ENST00000522556 ARF4P18085 180 aaPredicted RBP19.78■□□□□ 0.76
CLK4-211ENST00000522556 PLCG1P19174 1290 aa19.78■□□□□ 0.76
CLK4-211ENST00000522556 BMPR1AP36894 532 aa19.78■□□□□ 0.76
CLK4-211ENST00000522556 PBX3P40426 434 aa19.78■□□□□ 0.76
CLK4-211ENST00000522556 GPM6BQ13491 265 aa19.78■□□□□ 0.76
CLK4-211ENST00000522556 CDCA2Q69YH5 1023 aaPredicted RBP19.78■□□□□ 0.76
CLK4-211ENST00000522556 C1orf186Q6ZWK4 172 aa19.78■□□□□ 0.76
CLK4-211ENST00000522556 CWH43Q9H720 699 aa19.78■□□□□ 0.76
CLK4-211ENST00000522556 CHST12Q9NRB3 414 aa19.78■□□□□ 0.76
CLK4-211ENST00000522556 BLOC1S4Q9NUP1 217 aa19.78■□□□□ 0.76
CLK4-211ENST00000522556 TYW1Q9NV66 732 aaKnown RBP19.78■□□□□ 0.76
CLK4-211ENST00000522556 DACT1Q9NYF0 836 aa19.78■□□□□ 0.76
CLK4-211ENST00000522556 TFIP11Q9UBB9 837 aaKnown RBP19.78■□□□□ 0.76
CLK4-211ENST00000522556 STK24Q9Y6E0 443 aa19.78■□□□□ 0.76
CLK4-211ENST00000522556 C5orf67F2Z3F1 127 aa19.77■□□□□ 0.76
CLK4-211ENST00000522556 H3BNC9 293 aa19.77■□□□□ 0.76
CLK4-211ENST00000522556 B4GALT3O60512 393 aa19.77■□□□□ 0.76
CLK4-211ENST00000522556 ERLIN2O94905 339 aa19.77■□□□□ 0.76
CLK4-211ENST00000522556 F13A1P00488 732 aa19.77■□□□□ 0.76
CLK4-211ENST00000522556 ZSCAN22P10073 491 aaPredicted RBP19.77■□□□□ 0.76
CLK4-211ENST00000522556 POU3F3P20264 500 aaPredicted RBP19.77■□□□□ 0.76
CLK4-211ENST00000522556 AFF1P51825 1210 aaKnown RBP19.77■□□□□ 0.76
CLK4-211ENST00000522556 SLC12A3P55017 1021 aa19.77■□□□□ 0.76
CLK4-211ENST00000522556 CACNB1Q02641 598 aaPredicted RBP19.77■□□□□ 0.76
CLK4-211ENST00000522556 AK8Q96MA6 479 aa19.77■□□□□ 0.76
CLK4-211ENST00000522556 TRAIPQ9BWF2 469 aa19.77■□□□□ 0.76
CLK4-211ENST00000522556 NFKBIZQ9BYH8 718 aa19.77■□□□□ 0.76
CLK4-211ENST00000522556 TMEM117Q9H0C3 514 aa19.77■□□□□ 0.76
CLK4-211ENST00000522556 CCDC113Q9H0I3 377 aa19.77■□□□□ 0.76
CLK4-211ENST00000522556 ZSCAN16Q9H4T2 348 aaPredicted RBP19.77■□□□□ 0.76
CLK4-211ENST00000522556 ALG13Q9NP73 1137 aaKnown RBP19.77■□□□□ 0.76
CLK4-211ENST00000522556 PCDHB2Q9Y5E7 798 aa19.77■□□□□ 0.76
CLK4-211ENST00000522556 MYO7AQ13402 2215 aa19.77■□□□□ 0.76
CLK4-211ENST00000522556 SFI1A8K8P3 1242 aa19.76■□□□□ 0.75
CLK4-211ENST00000522556 PLA2G4BP0C869 781 aa19.76■□□□□ 0.75
CLK4-211ENST00000522556 LIG1P18858 919 aa19.76■□□□□ 0.75
CLK4-211ENST00000522556 DNAJB1P25685 340 aa19.76■□□□□ 0.75
CLK4-211ENST00000522556 LONP1P36776 959 aaKnown RBP19.76■□□□□ 0.75
CLK4-211ENST00000522556 UBA7P41226 1012 aa19.76■□□□□ 0.75
CLK4-211ENST00000522556 NASPP49321 788 aaPredicted RBP19.76■□□□□ 0.75
CLK4-211ENST00000522556 POU5F1BQ06416 359 aa19.76■□□□□ 0.75
CLK4-211ENST00000522556 AGMOQ6ZNB7 445 aa19.76■□□□□ 0.75
CLK4-211ENST00000522556 SYT2Q8N9I0 419 aaPredicted RBP19.76■□□□□ 0.75
CLK4-211ENST00000522556 SMG8Q8ND04 991 aaKnown RBP19.76■□□□□ 0.75
CLK4-211ENST00000522556 SYMPKQ92797 1274 aaKnown RBP19.76■□□□□ 0.75
CLK4-211ENST00000522556 CDK5RAP3Q96JB5 506 aa19.76■□□□□ 0.75
CLK4-211ENST00000522556 SAMD11Q96NU1 681 aa19.76■□□□□ 0.75
CLK4-211ENST00000522556 HES2Q9Y543 173 aa19.76■□□□□ 0.75
CLK4-211ENST00000522556 A0A087X0B3 334 aa19.75■□□□□ 0.75
CLK4-211ENST00000522556 GTPBP6O43824 516 aaPredicted RBP19.75■□□□□ 0.75
CLK4-211ENST00000522556 ITGB1P05556 798 aa19.75■□□□□ 0.75
CLK4-211ENST00000522556 NAMPTP43490 491 aa19.75■□□□□ 0.75
CLK4-211ENST00000522556 CAMK1Q14012 370 aa19.75■□□□□ 0.75
CLK4-211ENST00000522556 DHX8Q14562 1220 aaKnown RBP19.75■□□□□ 0.75
CLK4-211ENST00000522556 MCM6Q14566 821 aa19.75■□□□□ 0.75
CLK4-211ENST00000522556 SLC39A14Q15043 492 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms