RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 EXOC1LA0A1B0GW35 172 aa17.36■□□□□ 0.37
PCDHA3-201ENST00000522353 CDC27P30260 824 aa17.36■□□□□ 0.37
PCDHA3-201ENST00000522353 TMED2Q15363 201 aa17.36■□□□□ 0.37
PCDHA3-201ENST00000522353 DEPDC1BQ8WUY9 529 aa17.36■□□□□ 0.37
PCDHA3-201ENST00000522353 MYOZ2Q9NPC6 264 aa17.36■□□□□ 0.37
PCDHA3-201ENST00000522353 TEX2Q8IWB9 1127 aa17.35■□□□□ 0.37
PCDHA3-201ENST00000522353 EXOC4Q96A65 974 aa17.35■□□□□ 0.37
PCDHA3-201ENST00000522353 FAF2Q96CS3 445 aa17.35■□□□□ 0.37
PCDHA3-201ENST00000522353 C11orf70Q9BRQ4 267 aa17.35■□□□□ 0.37
PCDHA3-201ENST00000522353 CYP2B6P20813 491 aa17.35■□□□□ 0.37
PCDHA3-201ENST00000522353 CASP2P42575 452 aa17.35■□□□□ 0.37
PCDHA3-201ENST00000522353 PDIA5Q14554 519 aa17.35■□□□□ 0.37
PCDHA3-201ENST00000522353 EFHC2Q5JST6 749 aa17.35■□□□□ 0.37
PCDHA3-201ENST00000522353 GPRC5AQ8NFJ5 357 aa17.35■□□□□ 0.37
PCDHA3-201ENST00000522353 ZNF668Q96K58 619 aaPredicted RBP17.35■□□□□ 0.37
PCDHA3-201ENST00000522353 DDX50Q9BQ39 737 aaKnown RBP17.35■□□□□ 0.37
PCDHA3-201ENST00000522353 SYNGAP1Q96PV0 1343 aa17.35■□□□□ 0.37
PCDHA3-201ENST00000522353 PNPLA6Q8IY17 1366 aa17.35■□□□□ 0.37
PCDHA3-201ENST00000522353 A0A087WWV3 80 aa17.35■□□□□ 0.37
PCDHA3-201ENST00000522353 SOWAHDA6NJG2 315 aa17.35■□□□□ 0.37
PCDHA3-201ENST00000522353 MAP3K7O43318 606 aa17.35■□□□□ 0.37
PCDHA3-201ENST00000522353 PRKCBP05771 671 aa17.35■□□□□ 0.37
PCDHA3-201ENST00000522353 CSF1RP07333 972 aa17.35■□□□□ 0.37
PCDHA3-201ENST00000522353 YWHABP31946 246 aaKnown RBP17.35■□□□□ 0.37
PCDHA3-201ENST00000522353 TADA2BQ86TJ2 420 aa17.35■□□□□ 0.37
PCDHA3-201ENST00000522353 SUCLA2Q9P2R7 463 aaPredicted RBP17.35■□□□□ 0.37
PCDHA3-201ENST00000522353 IQANK1A0A1B0GTG1 560 aa17.35■□□□□ 0.37
PCDHA3-201ENST00000522353 MFAP3LO75121 409 aa17.35■□□□□ 0.37
PCDHA3-201ENST00000522353 BAG2O95816 211 aa17.35■□□□□ 0.37
PCDHA3-201ENST00000522353 NR3C2P08235 984 aa17.35■□□□□ 0.37
PCDHA3-201ENST00000522353 ZNF512BQ96KM6 892 aaPredicted RBP17.35■□□□□ 0.37
PCDHA3-201ENST00000522353 CTNND1O60716 968 aaKnown RBP17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 KRT7P08729 469 aa17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 GNA15P30679 374 aa17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 PSMC1P62191 440 aaKnown RBP17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 BTBD8Q5XKL5 378 aa17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 KCTD16Q68DU8 428 aa17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 CYFIP1Q7L576 1253 aa17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 PDCD6IPQ8WUM4 868 aaKnown RBP17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 SCG3Q8WXD2 468 aaKnown RBP17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 DEFB129Q9H1M3 183 aa17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 PODXLO00592 558 aa17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 CXCR5P32302 372 aa17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 TTC23LQ6PF05 361 aa17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 NUDT12Q9BQG2 462 aa17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 CYP26B1Q9NR63 512 aa17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 RARBP10826 455 aa17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 IFNAR2P48551 515 aa17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 TRIP13Q15645 432 aaPredicted RBP17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 CHST13Q8NET6 341 aa17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 WHAMMQ8TF30 809 aa17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 CFAP36Q96G28 342 aa17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 KRT37O76014 449 aa17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 NTSR2O95665 410 aa17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 TAC1P20366 129 aa17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 SLC8A1P32418 973 aa17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 SH3BGRP55822 239 aaPredicted RBP17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 SLC12A1Q13621 1099 aa17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 PASD1Q8IV76 773 aa17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 STAG2Q8N3U4 1231 aa17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 TACO1Q9BSH4 297 aaKnown RBP17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 CPSF2Q9P2I0 782 aaKnown RBP17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 PPME1Q9Y570 386 aa17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 SETD1BQ9UPS6 1966 aaKnown RBP17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 PTPRUQ92729 1446 aa17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 CCDC151A5D8V7 595 aa17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 ZNF189O75820 626 aaPredicted RBP17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 SMIM5Q71RC9 77 aa17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 FBXL13Q8NEE6 735 aa17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 GBP5Q96PP8 586 aa17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 FMO2Q99518 471 aa17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 CNOT10Q9H9A5 744 aaKnown RBP17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 ABCF3Q9NUQ8 709 aa17.34■□□□□ 0.37
PCDHA3-201ENST00000522353 USP42Q9H9J4 1324 aaKnown RBP17.33■□□□□ 0.37
PCDHA3-201ENST00000522353 CELF2O95319 508 aaKnown RBP17.33■□□□□ 0.37
PCDHA3-201ENST00000522353 HDLBPQ00341 1268 aaKnown RBP17.33■□□□□ 0.37
PCDHA3-201ENST00000522353 SCFD2Q8WU76 684 aa17.33■□□□□ 0.37
PCDHA3-201ENST00000522353 SAAL1Q96ER3 474 aa17.33■□□□□ 0.37
PCDHA3-201ENST00000522353 MAFGO15525 162 aa17.33■□□□□ 0.36
PCDHA3-201ENST00000522353 TBX3O15119 743 aa17.33■□□□□ 0.36
PCDHA3-201ENST00000522353 RFC1P35251 1148 aaPredicted RBP17.33■□□□□ 0.36
PCDHA3-201ENST00000522353 ASIC4Q96FT7 647 aa17.33■□□□□ 0.36
PCDHA3-201ENST00000522353 HINFPQ9BQA5 517 aa17.33■□□□□ 0.36
PCDHA3-201ENST00000522353 EPS15L1Q9UBC2 864 aa17.33■□□□□ 0.36
PCDHA3-201ENST00000522353 ASAP2O43150 1006 aa17.33■□□□□ 0.36
PCDHA3-201ENST00000522353 MYBL1P10243 752 aa17.33■□□□□ 0.36
PCDHA3-201ENST00000522353 PRCPP42785 496 aa17.33■□□□□ 0.36
PCDHA3-201ENST00000522353 EIF3BP55884 814 aaKnown RBP17.33■□□□□ 0.36
PCDHA3-201ENST00000522353 ARL4CP56559 192 aa17.33■□□□□ 0.36
PCDHA3-201ENST00000522353 DRP2Q13474 957 aa17.33■□□□□ 0.36
PCDHA3-201ENST00000522353 TRIM67Q6ZTA4 783 aa17.33■□□□□ 0.36
PCDHA3-201ENST00000522353 FGD4Q96M96 766 aa17.33■□□□□ 0.36
PCDHA3-201ENST00000522353 FGGP02679 453 aa17.32■□□□□ 0.36
PCDHA3-201ENST00000522353 ADORA2BP29275 332 aa17.32■□□□□ 0.36
PCDHA3-201ENST00000522353 ATP2C1P98194 919 aaPredicted RBP17.32■□□□□ 0.36
PCDHA3-201ENST00000522353 SPON2Q9BUD6 331 aa17.32■□□□□ 0.36
PCDHA3-201ENST00000522353 TRPV6Q9H1D0 765 aa17.32■□□□□ 0.36
PCDHA3-201ENST00000522353 DYRK4Q9NR20 520 aa17.32■□□□□ 0.36
PCDHA3-201ENST00000522353 SLC13A4Q9UKG4 626 aa17.32■□□□□ 0.36
PCDHA3-201ENST00000522353 ATXN8OSP0DMR3 200 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms