RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 ZBED2Q9BTP6 218 aa7.55□□□□□ -1.2
SPIDR-218ENST00000522222 ADAMTS10Q9H324 1103 aa7.55□□□□□ -1.2
SPIDR-218ENST00000522222 TMX1Q9H3N1 280 aa7.55□□□□□ -1.2
SPIDR-218ENST00000522222 SLC28A3Q9HAS3 691 aa7.55□□□□□ -1.2
SPIDR-218ENST00000522222 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.55□□□□□ -1.2
SPIDR-218ENST00000522222 PADI3Q9ULW8 664 aa7.55□□□□□ -1.2
SPIDR-218ENST00000522222 STXBP5LQ9Y2K9 1186 aa7.55□□□□□ -1.2
SPIDR-218ENST00000522222 NOC2LQ9Y3T9 749 aaKnown RBP7.55□□□□□ -1.2
SPIDR-218ENST00000522222 SQORQ9Y6N5 450 aa7.55□□□□□ -1.2
SPIDR-218ENST00000522222 CHD9Q3L8U1 2897 aa7.55□□□□□ -1.2
SPIDR-218ENST00000522222 CHD7Q9P2D1 2997 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 EPOPA6NHQ4 379 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 IKBKBO14920 756 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 ZBTB39O15060 712 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 SPTLC2O15270 562 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 MGEA5O60502 916 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 MAFO75444 373 aaPredicted RBP7.54□□□□□ -1.2
SPIDR-218ENST00000522222 MED24O75448 989 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 RPS6KA5O75582 802 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 SLITRK3O94933 977 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 SPATA31C1P0DKV0 1188 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 PYGBP11216 843 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 DARSP14868 501 aaKnown RBP7.54□□□□□ -1.2
SPIDR-218ENST00000522222 FOSL2P15408 326 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 CMA1P23946 247 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 RFC5P40937 340 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 TECP42680 631 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 HTRA4P83105 476 aaPredicted RBP7.54□□□□□ -1.2
SPIDR-218ENST00000522222 ATP2C1P98194 919 aaPredicted RBP7.54□□□□□ -1.2
SPIDR-218ENST00000522222 NFX1Q12986 1120 aaKnown RBP7.54□□□□□ -1.2
SPIDR-218ENST00000522222 PTGDRQ13258 359 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 SNW1Q13573 536 aaKnown RBP7.54□□□□□ -1.2
SPIDR-218ENST00000522222 TPD52L1Q16890 204 aaPredicted RBP7.54□□□□□ -1.2
SPIDR-218ENST00000522222 RILPL1Q5EBL4 403 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 XKR9Q5GH70 373 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 FAM173BQ6P4H8 233 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 FMR1NBQ8N0W7 255 aaPredicted RBP7.54□□□□□ -1.2
SPIDR-218ENST00000522222 LINC00301Q8NCQ3 95 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 CCDC112Q8NEF3 446 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 NLRP7Q8WX94 980 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 SLC7A3Q8WY07 619 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 TMEM143Q96AN5 459 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 NLRP4Q96MN2 994 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 CCDC43Q96MW1 224 aaKnown RBP7.54□□□□□ -1.2
SPIDR-218ENST00000522222 ZNF830Q96NB3 372 aaPredicted RBP7.54□□□□□ -1.2
SPIDR-218ENST00000522222 USP28Q96RU2 1077 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 YME1L1Q96TA2 773 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 RAD9AQ99638 391 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 JPH2Q9BR39 696 aaPredicted RBP7.54□□□□□ -1.2
SPIDR-218ENST00000522222 PRDM12Q9H4Q4 367 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 DHX33Q9H6R0 707 aaKnown RBP7.54□□□□□ -1.2
SPIDR-218ENST00000522222 TUFT1Q9NNX1 390 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 SCUBE2Q9NQ36 999 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 XPNPEP1Q9NQW7 623 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 CGNQ9P2M7 1197 aaKnown RBP7.54□□□□□ -1.2
SPIDR-218ENST00000522222 SUCLA2Q9P2R7 463 aaPredicted RBP7.54□□□□□ -1.2
SPIDR-218ENST00000522222 DACH1Q9UI36 760 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 PPME1Q9Y570 386 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 MYO9BQ13459 2157 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 TTC3P53804 2025 aa7.54□□□□□ -1.2
SPIDR-218ENST00000522222 ADGRA3Q8IWK6 1321 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 A0A087WWV3 80 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 A0A087WZ62 844 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 FAM237AA0A1B0GTK4 181 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 LINC01553A4QN01 128 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 PP2D1A8MPX8 630 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 LAD1O00515 517 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 AP5Z1O43299 807 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 GAS2O43903 313 aaKnown RBP7.53□□□□□ -1.2
SPIDR-218ENST00000522222 USO1O60763 962 aaKnown RBP7.53□□□□□ -1.2
SPIDR-218ENST00000522222 UPP2O95045 317 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 TNNT1P13805 278 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 IBSPP21815 317 aaPredicted RBP7.53□□□□□ -1.2
SPIDR-218ENST00000522222 FGFR4P22455 802 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 EIF4BP23588 611 aaKnown RBP7.53□□□□□ -1.2
SPIDR-218ENST00000522222 CCT6AP40227 531 aaKnown RBP7.53□□□□□ -1.2
SPIDR-218ENST00000522222 PRPHP41219 470 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 RARRES1P49788 294 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 DNM2P50570 870 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 NLRP12P59046 1061 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 RBM10P98175 930 aaKnown RBP7.53□□□□□ -1.2
SPIDR-218ENST00000522222 ADGRE1Q14246 886 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 DSC3Q14574 896 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 IL17AQ16552 155 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 TPRNQ4KMQ1 711 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 HAUS3Q68CZ6 603 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 OTUD6AQ7L8S5 288 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 RTN4RL1Q86UN2 441 aaPredicted RBP7.53□□□□□ -1.2
SPIDR-218ENST00000522222 ZNF410Q86VK4 478 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 CATSPER3Q86XQ3 398 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 RHPN2Q8IUC4 686 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 NPAS4Q8IUM7 802 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 KSR1Q8IVT5 923 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 LRRC8AQ8IWT6 810 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 ZNF710Q8N1W2 664 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 ERMNQ8TAM6 284 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 SNX29Q8TEQ0 813 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 PIGOQ8TEQ8 1089 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 GDPD5Q8WTR4 605 aa7.53□□□□□ -1.2
SPIDR-218ENST00000522222 PSPC1Q8WXF1 523 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms