RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 GTF2IRD1Q9UHL9 959 aa23.49■■□□□ 1.35
R3HCC1-208ENST00000522012 KBTBD13C9JR72 458 aa23.49■■□□□ 1.35
R3HCC1-208ENST00000522012 CDK11BP21127 795 aaKnown RBP23.49■■□□□ 1.35
R3HCC1-208ENST00000522012 ABCD1P33897 745 aa23.49■■□□□ 1.35
R3HCC1-208ENST00000522012 PPP4R3CPQ6ZMV5 832 aa23.49■■□□□ 1.35
R3HCC1-208ENST00000522012 RUFY4Q6ZNE9 571 aa23.49■■□□□ 1.35
R3HCC1-208ENST00000522012 NOC3LQ8WTT2 800 aaKnown RBP23.49■■□□□ 1.35
R3HCC1-208ENST00000522012 EEF2KMTQ96G04 330 aa23.49■■□□□ 1.35
R3HCC1-208ENST00000522012 GLT1D1Q96MS3 346 aa23.49■■□□□ 1.35
R3HCC1-208ENST00000522012 PPP1R16BQ96T49 567 aa23.49■■□□□ 1.35
R3HCC1-208ENST00000522012 EXOC7Q9UPT5 735 aa23.49■■□□□ 1.35
R3HCC1-208ENST00000522012 TRAF3IP3Q9Y228 551 aa23.49■■□□□ 1.35
R3HCC1-208ENST00000522012 ZMYM2Q9UBW7 1377 aa23.48■■□□□ 1.35
R3HCC1-208ENST00000522012 SMIM35A0A1B0GVV1 85 aa23.48■■□□□ 1.35
R3HCC1-208ENST00000522012 K7ERI5 159 aa23.48■■□□□ 1.35
R3HCC1-208ENST00000522012 TGFB1I1O43294 461 aa23.48■■□□□ 1.35
R3HCC1-208ENST00000522012 SCP2P22307 547 aa23.48■■□□□ 1.35
R3HCC1-208ENST00000522012 HOXC8P31273 242 aa23.48■■□□□ 1.35
R3HCC1-208ENST00000522012 STRN3Q13033 797 aa23.48■■□□□ 1.35
R3HCC1-208ENST00000522012 FOXR2Q6PJQ5 311 aa23.48■■□□□ 1.35
R3HCC1-208ENST00000522012 HS2ST1Q7LGA3 356 aa23.48■■□□□ 1.35
R3HCC1-208ENST00000522012 ZBTB8OSQ8IWT0 167 aa23.48■■□□□ 1.35
R3HCC1-208ENST00000522012 GBP3Q9H0R5 595 aa23.48■■□□□ 1.35
R3HCC1-208ENST00000522012 ATP1A3P13637 1013 aa23.47■■□□□ 1.35
R3HCC1-208ENST00000522012 EFNA5P52803 228 aa23.47■■□□□ 1.35
R3HCC1-208ENST00000522012 ITGA7Q13683 1181 aa23.47■■□□□ 1.35
R3HCC1-208ENST00000522012 GDF6Q6KF10 455 aaPredicted RBP23.47■■□□□ 1.35
R3HCC1-208ENST00000522012 CREBRFQ8IUR6 639 aa23.47■■□□□ 1.35
R3HCC1-208ENST00000522012 MAP4K3Q8IVH8 894 aa23.47■■□□□ 1.35
R3HCC1-208ENST00000522012 SCLT1Q96NL6 688 aa23.47■■□□□ 1.35
R3HCC1-208ENST00000522012 C2orf40Q9H1Z8 148 aa23.47■■□□□ 1.35
R3HCC1-208ENST00000522012 THAP9Q9H5L6 903 aa23.47■■□□□ 1.35
R3HCC1-208ENST00000522012 GRIN2DO15399 1336 aa23.47■■□□□ 1.35
R3HCC1-208ENST00000522012 CLIC2O15247 247 aa23.46■■□□□ 1.35
R3HCC1-208ENST00000522012 FGFR1OPO95684 399 aaKnown RBP23.46■■□□□ 1.35
R3HCC1-208ENST00000522012 ZNF18P17022 549 aa23.46■■□□□ 1.35
R3HCC1-208ENST00000522012 FKBP3Q00688 224 aaKnown RBP23.46■■□□□ 1.35
R3HCC1-208ENST00000522012 EDRF1Q3B7T1 1238 aa23.46■■□□□ 1.35
R3HCC1-208ENST00000522012 CDKAL1Q5VV42 579 aa23.46■■□□□ 1.35
R3HCC1-208ENST00000522012 TAS1R3Q7RTX0 852 aa23.46■■□□□ 1.35
R3HCC1-208ENST00000522012 DNAJB3Q8WWF6 145 aa23.46■■□□□ 1.35
R3HCC1-208ENST00000522012 NLRP7Q8WX94 980 aa23.46■■□□□ 1.35
R3HCC1-208ENST00000522012 ZNF333Q96JL9 665 aa23.46■■□□□ 1.35
R3HCC1-208ENST00000522012 TMEM134Q9H6X4 195 aa23.46■■□□□ 1.35
R3HCC1-208ENST00000522012 A0A087WZ62 844 aa23.45■■□□□ 1.34
R3HCC1-208ENST00000522012 A0A1W2PQ45 241 aaPredicted RBP23.45■■□□□ 1.34
R3HCC1-208ENST00000522012 A0A1W2PQY0 241 aa23.45■■□□□ 1.34
R3HCC1-208ENST00000522012 PHKA2P46019 1235 aa23.45■■□□□ 1.34
R3HCC1-208ENST00000522012 NLRP11P59045 1033 aaKnown RBP23.45■■□□□ 1.34
R3HCC1-208ENST00000522012 ADAM9Q13443 819 aa23.45■■□□□ 1.34
R3HCC1-208ENST00000522012 CDCA2Q69YH5 1023 aaPredicted RBP23.45■■□□□ 1.34
R3HCC1-208ENST00000522012 SESTD1Q86VW0 696 aa23.45■■□□□ 1.34
R3HCC1-208ENST00000522012 GOLGA5Q8TBA6 731 aa23.45■■□□□ 1.34
R3HCC1-208ENST00000522012 BICD1Q96G01 975 aa23.45■■□□□ 1.34
R3HCC1-208ENST00000522012 FDXACB1Q9BRP7 624 aaPredicted RBP23.45■■□□□ 1.34
R3HCC1-208ENST00000522012 AGPAT3Q9NRZ7 376 aa23.45■■□□□ 1.34
R3HCC1-208ENST00000522012 MAGEC2Q9UBF1 373 aaPredicted RBP23.45■■□□□ 1.34
R3HCC1-208ENST00000522012 OGDHLQ9ULD0 1010 aa23.45■■□□□ 1.34
R3HCC1-208ENST00000522012 PHF24Q9UPV7 400 aa23.45■■□□□ 1.34
R3HCC1-208ENST00000522012 PHLPP2Q6ZVD8 1323 aa23.44■■□□□ 1.34
R3HCC1-208ENST00000522012 DNM1LO00429 736 aa23.44■■□□□ 1.34
R3HCC1-208ENST00000522012 AP5Z1O43299 807 aa23.44■■□□□ 1.34
R3HCC1-208ENST00000522012 NR3C1P04150 777 aa23.44■■□□□ 1.34
R3HCC1-208ENST00000522012 NR2F2P24468 414 aa23.44■■□□□ 1.34
R3HCC1-208ENST00000522012 RPL13P26373 211 aaKnown RBP23.44■■□□□ 1.34
R3HCC1-208ENST00000522012 PTENP60484 403 aa23.44■■□□□ 1.34
R3HCC1-208ENST00000522012 TMEM62Q0P6H9 643 aa23.44■■□□□ 1.34
R3HCC1-208ENST00000522012 STARD7Q9NQZ5 370 aa23.44■■□□□ 1.34
R3HCC1-208ENST00000522012 KCNJ18B7U540 433 aa23.43■■□□□ 1.34
R3HCC1-208ENST00000522012 INO80B-WBP1J3KQ70 363 aa23.43■■□□□ 1.34
R3HCC1-208ENST00000522012 CETN3O15182 167 aa23.43■■□□□ 1.34
R3HCC1-208ENST00000522012 SERPINC1P01008 464 aa23.43■■□□□ 1.34
R3HCC1-208ENST00000522012 GPC3P51654 580 aa23.43■■□□□ 1.34
R3HCC1-208ENST00000522012 CDC42EP1Q00587 391 aa23.43■■□□□ 1.34
R3HCC1-208ENST00000522012 POU5F1BQ06416 359 aa23.43■■□□□ 1.34
R3HCC1-208ENST00000522012 KCNJ12Q14500 433 aa23.43■■□□□ 1.34
R3HCC1-208ENST00000522012 TAF2Q6P1X5 1199 aa23.43■■□□□ 1.34
R3HCC1-208ENST00000522012 LRRC55Q6ZSA7 311 aa23.43■■□□□ 1.34
R3HCC1-208ENST00000522012 IRF2BP1Q8IU81 584 aa23.43■■□□□ 1.34
R3HCC1-208ENST00000522012 FAM114A1Q8IWE2 563 aa23.43■■□□□ 1.34
R3HCC1-208ENST00000522012 ANP32BQ92688 251 aaKnown RBP23.43■■□□□ 1.34
R3HCC1-208ENST00000522012 KCNN1Q92952 543 aa23.43■■□□□ 1.34
R3HCC1-208ENST00000522012 ARMC5Q96C12 935 aa23.43■■□□□ 1.34
R3HCC1-208ENST00000522012 INO80BQ9C086 356 aaPredicted RBP23.43■■□□□ 1.34
R3HCC1-208ENST00000522012 TISP43B9A030 160 aa23.43■■□□□ 1.34
R3HCC1-208ENST00000522012 TFRCP02786 760 aaKnown RBP23.43■■□□□ 1.34
R3HCC1-208ENST00000522012 FANCCQ00597 558 aa23.43■■□□□ 1.34
R3HCC1-208ENST00000522012 PTGISQ16647 500 aa23.43■■□□□ 1.34
R3HCC1-208ENST00000522012 MAPK6Q16659 721 aa23.43■■□□□ 1.34
R3HCC1-208ENST00000522012 KIZQ2M2Z5 673 aa23.43■■□□□ 1.34
R3HCC1-208ENST00000522012 CEP63Q96MT8 703 aa23.43■■□□□ 1.34
R3HCC1-208ENST00000522012 NFKBIZQ9BYH8 718 aa23.43■■□□□ 1.34
R3HCC1-208ENST00000522012 TRIM5Q9C035 493 aa23.43■■□□□ 1.34
R3HCC1-208ENST00000522012 CCDC113Q9H0I3 377 aa23.43■■□□□ 1.34
R3HCC1-208ENST00000522012 IFT122Q9HBG6 1241 aa23.43■■□□□ 1.34
R3HCC1-208ENST00000522012 CGNQ9P2M7 1197 aaKnown RBP23.43■■□□□ 1.34
R3HCC1-208ENST00000522012 GINS2Q9Y248 185 aa23.43■■□□□ 1.34
R3HCC1-208ENST00000522012 USP20Q9Y2K6 914 aa23.43■■□□□ 1.34
R3HCC1-208ENST00000522012 ANKRD63C9JTQ0 380 aa23.42■■□□□ 1.34
R3HCC1-208ENST00000522012 HNRNPDLO14979 420 aaKnown RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms