RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 ST6GALNAC4Q9H4F1 302 aa16.54■□□□□ 0.24
SREK1-209ENST00000520953 MINDY3Q9H8M7 445 aa16.54■□□□□ 0.24
SREK1-209ENST00000520953 C17orf75Q9HAS0 396 aa16.54■□□□□ 0.24
SREK1-209ENST00000520953 PAK6Q9NQU5 681 aaPredicted RBP16.54■□□□□ 0.24
SREK1-209ENST00000520953 MBLAC1A4D2B0 266 aaPredicted RBP16.53■□□□□ 0.24
SREK1-209ENST00000520953 MAGEB2O15479 319 aa16.53■□□□□ 0.24
SREK1-209ENST00000520953 HOXC8P31273 242 aa16.53■□□□□ 0.24
SREK1-209ENST00000520953 SLC39A4Q6P5W5 647 aa16.53■□□□□ 0.24
SREK1-209ENST00000520953 APTXQ7Z2E3 356 aaKnown RBP16.53■□□□□ 0.24
SREK1-209ENST00000520953 RETREG2Q8NC44 543 aa16.53■□□□□ 0.24
SREK1-209ENST00000520953 DEPTORQ8TB45 409 aa16.53■□□□□ 0.24
SREK1-209ENST00000520953 TCP11Q8WWU5 503 aa16.53■□□□□ 0.24
SREK1-209ENST00000520953 NAP1L5Q96NT1 182 aaPredicted RBP16.53■□□□□ 0.24
SREK1-209ENST00000520953 KATNAL1Q9BW62 490 aa16.53■□□□□ 0.24
SREK1-209ENST00000520953 RNF208Q9H0X6 261 aa16.53■□□□□ 0.24
SREK1-209ENST00000520953 BICDL2A1A5D9 508 aa16.53■□□□□ 0.24
SREK1-209ENST00000520953 C17orf102A2RUQ5 167 aa16.53■□□□□ 0.24
SREK1-209ENST00000520953 GOLGA6L6A8MZA4 724 aa16.53■□□□□ 0.24
SREK1-209ENST00000520953 ZEB2O60315 1214 aa16.53■□□□□ 0.24
SREK1-209ENST00000520953 KPNA6O60684 536 aa16.53■□□□□ 0.24
SREK1-209ENST00000520953 IQCF3P0C7M6 154 aa16.53■□□□□ 0.24
SREK1-209ENST00000520953 CYP2C9P11712 490 aa16.53■□□□□ 0.24
SREK1-209ENST00000520953 PPP1R2P41236 205 aa16.53■□□□□ 0.24
SREK1-209ENST00000520953 LRRC63Q05C16 580 aa16.53■□□□□ 0.24
SREK1-209ENST00000520953 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.53■□□□□ 0.24
SREK1-209ENST00000520953 SYCP3Q8IZU3 236 aa16.53■□□□□ 0.24
SREK1-209ENST00000520953 DNAJB3Q8WWF6 145 aa16.53■□□□□ 0.24
SREK1-209ENST00000520953 CTAGE1Q96RT6 745 aa16.53■□□□□ 0.24
SREK1-209ENST00000520953 CDHR5Q9HBB8 845 aa16.53■□□□□ 0.24
SREK1-209ENST00000520953 AGPAT3Q9NRZ7 376 aa16.53■□□□□ 0.24
SREK1-209ENST00000520953 SIP14410 1827 aa16.52■□□□□ 0.24
SREK1-209ENST00000520953 A0A087WZ62 844 aa16.52■□□□□ 0.24
SREK1-209ENST00000520953 RRN3P2A6NIE6 340 aa16.52■□□□□ 0.24
SREK1-209ENST00000520953 CASP4P49662 377 aa16.52■□□□□ 0.24
SREK1-209ENST00000520953 FANCCQ00597 558 aa16.52■□□□□ 0.24
SREK1-209ENST00000520953 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.52■□□□□ 0.24
SREK1-209ENST00000520953 MAP4K3Q8IVH8 894 aa16.52■□□□□ 0.24
SREK1-209ENST00000520953 VTI1AQ96AJ9 217 aa16.52■□□□□ 0.24
SREK1-209ENST00000520953 ACCSQ96QU6 501 aa16.52■□□□□ 0.24
SREK1-209ENST00000520953 FDXACB1Q9BRP7 624 aaPredicted RBP16.52■□□□□ 0.24
SREK1-209ENST00000520953 CBWD1Q9BRT8 395 aa16.52■□□□□ 0.24
SREK1-209ENST00000520953 IFT122Q9HBG6 1241 aa16.52■□□□□ 0.24
SREK1-209ENST00000520953 TYW1Q9NV66 732 aaKnown RBP16.52■□□□□ 0.24
SREK1-209ENST00000520953 IFNKQ9P0W0 207 aa16.52■□□□□ 0.24
SREK1-209ENST00000520953 TRAF3IP3Q9Y228 551 aa16.52■□□□□ 0.24
SREK1-209ENST00000520953 PDXKO00764 312 aa16.51■□□□□ 0.23
SREK1-209ENST00000520953 GAS2O43903 313 aaKnown RBP16.51■□□□□ 0.23
SREK1-209ENST00000520953 MSCO60682 206 aa16.51■□□□□ 0.23
SREK1-209ENST00000520953 TPM3P06753 285 aa16.51■□□□□ 0.23
SREK1-209ENST00000520953 KIZQ2M2Z5 673 aa16.51■□□□□ 0.23
SREK1-209ENST00000520953 PCSK9Q8NBP7 692 aaKnown RBP16.51■□□□□ 0.23
SREK1-209ENST00000520953 TSG101Q99816 390 aa16.51■□□□□ 0.23
SREK1-209ENST00000520953 JPH2Q9BR39 696 aaPredicted RBP16.51■□□□□ 0.23
SREK1-209ENST00000520953 GBP3Q9H0R5 595 aa16.51■□□□□ 0.23
SREK1-209ENST00000520953 PCIF1Q9H4Z3 704 aa16.51■□□□□ 0.23
SREK1-209ENST00000520953 INTS13Q9NVM9 706 aa16.51■□□□□ 0.23
SREK1-209ENST00000520953 GTF2IRD1Q9UHL9 959 aa16.51■□□□□ 0.23
SREK1-209ENST00000520953 GINS2Q9Y248 185 aa16.51■□□□□ 0.23
SREK1-209ENST00000520953 UBE4BO95155 1302 aa16.51■□□□□ 0.23
SREK1-209ENST00000520953 KCNJ18B7U540 433 aa16.51■□□□□ 0.23
SREK1-209ENST00000520953 NR3C1P04150 777 aa16.51■□□□□ 0.23
SREK1-209ENST00000520953 CDK11BP21127 795 aaKnown RBP16.51■□□□□ 0.23
SREK1-209ENST00000520953 NR2F2P24468 414 aa16.51■□□□□ 0.23
SREK1-209ENST00000520953 ADSSP30520 456 aa16.51■□□□□ 0.23
SREK1-209ENST00000520953 CTCFP49711 727 aaPredicted RBP16.51■□□□□ 0.23
SREK1-209ENST00000520953 DNM2P50570 870 aa16.51■□□□□ 0.23
SREK1-209ENST00000520953 CYP2J2P51589 502 aa16.51■□□□□ 0.23
SREK1-209ENST00000520953 NLRP11P59045 1033 aaKnown RBP16.51■□□□□ 0.23
SREK1-209ENST00000520953 KCNJ12Q14500 433 aa16.51■□□□□ 0.23
SREK1-209ENST00000520953 MXD4Q14582 209 aaPredicted RBP16.51■□□□□ 0.23
SREK1-209ENST00000520953 PPP2R5AQ15172 486 aa16.51■□□□□ 0.23
SREK1-209ENST00000520953 KRT31Q15323 416 aa16.51■□□□□ 0.23
SREK1-209ENST00000520953 CDCA2Q69YH5 1023 aaPredicted RBP16.51■□□□□ 0.23
SREK1-209ENST00000520953 ZBTB45Q96K62 511 aaPredicted RBP16.51■□□□□ 0.23
SREK1-209ENST00000520953 CNOT6LQ96LI5 555 aaKnown RBP16.51■□□□□ 0.23
SREK1-209ENST00000520953 CCDC113Q9H0I3 377 aa16.51■□□□□ 0.23
SREK1-209ENST00000520953 TAB2Q9NYJ8 693 aa16.51■□□□□ 0.23
SREK1-209ENST00000520953 A0A1W2PQ45 241 aaPredicted RBP16.5■□□□□ 0.23
SREK1-209ENST00000520953 A0A1W2PQY0 241 aa16.5■□□□□ 0.23
SREK1-209ENST00000520953 B4GALT5O43286 388 aa16.5■□□□□ 0.23
SREK1-209ENST00000520953 FGFR4P22455 802 aa16.5■□□□□ 0.23
SREK1-209ENST00000520953 CDC25BP30305 580 aa16.5■□□□□ 0.23
SREK1-209ENST00000520953 GPC3P51654 580 aa16.5■□□□□ 0.23
SREK1-209ENST00000520953 ADAM9Q13443 819 aa16.5■□□□□ 0.23
SREK1-209ENST00000520953 TCP11X2Q5H9J9 407 aa16.5■□□□□ 0.23
SREK1-209ENST00000520953 STXBP4Q6ZWJ1 553 aa16.5■□□□□ 0.23
SREK1-209ENST00000520953 DRC7Q8IY82 874 aa16.5■□□□□ 0.23
SREK1-209ENST00000520953 EXOC8Q8IYI6 725 aa16.5■□□□□ 0.23
SREK1-209ENST00000520953 TARS2Q9BW92 718 aaKnown RBP16.5■□□□□ 0.23
SREK1-209ENST00000520953 XPO4Q9C0E2 1151 aaKnown RBP16.5■□□□□ 0.23
SREK1-209ENST00000520953 HAPLN2Q9GZV7 340 aa16.5■□□□□ 0.23
SREK1-209ENST00000520953 TRMT13Q9NUP7 481 aaKnown RBP16.5■□□□□ 0.23
SREK1-209ENST00000520953 K7ERI5 159 aa16.5■□□□□ 0.23
SREK1-209ENST00000520953 AKAP3O75969 853 aa16.5■□□□□ 0.23
SREK1-209ENST00000520953 KIF20AO95235 890 aa16.5■□□□□ 0.23
SREK1-209ENST00000520953 FKBP3Q00688 224 aaKnown RBP16.5■□□□□ 0.23
SREK1-209ENST00000520953 MBTD1Q05BQ5 628 aa16.5■□□□□ 0.23
SREK1-209ENST00000520953 ITGA7Q13683 1181 aa16.5■□□□□ 0.23
SREK1-209ENST00000520953 FBXO46Q6PJ61 603 aaPredicted RBP16.5■□□□□ 0.23
SREK1-209ENST00000520953 CCDC186Q7Z3E2 898 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms