RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 NRDE2Q9H7Z3 1164 aa12.93□□□□□ -0.34
MRPS28-206ENST00000520946 FAM105AQ9NUU6 356 aa12.93□□□□□ -0.34
MRPS28-206ENST00000520946 TBC1D13Q9NVG8 400 aa12.93□□□□□ -0.34
MRPS28-206ENST00000520946 KANSL3Q9P2N6 904 aa12.93□□□□□ -0.34
MRPS28-206ENST00000520946 SUCLA2Q9P2R7 463 aaPredicted RBP12.93□□□□□ -0.34
MRPS28-206ENST00000520946 SSX2IPQ9Y2D8 614 aa12.93□□□□□ -0.34
MRPS28-206ENST00000520946 FAN1Q9Y2M0 1017 aa12.93□□□□□ -0.34
MRPS28-206ENST00000520946 IRAK3Q9Y616 596 aa12.93□□□□□ -0.34
MRPS28-206ENST00000520946 C2CD2LO14523 706 aa12.92□□□□□ -0.34
MRPS28-206ENST00000520946 MSH4O15457 936 aa12.92□□□□□ -0.34
MRPS28-206ENST00000520946 ZNF862O60290 1169 aa12.92□□□□□ -0.34
MRPS28-206ENST00000520946 NR1I2O75469 434 aa12.92□□□□□ -0.34
MRPS28-206ENST00000520946 AOC1P19801 751 aa12.92□□□□□ -0.34
MRPS28-206ENST00000520946 CIITAP33076 1130 aa12.92□□□□□ -0.34
MRPS28-206ENST00000520946 NLRP5P59047 1200 aa12.92□□□□□ -0.34
MRPS28-206ENST00000520946 ANGPT1Q15389 498 aa12.92□□□□□ -0.34
MRPS28-206ENST00000520946 LETM2Q2VYF4 491 aa12.92□□□□□ -0.34
MRPS28-206ENST00000520946 ZNF410Q86VK4 478 aa12.92□□□□□ -0.34
MRPS28-206ENST00000520946 LINC01465Q8N7H1 131 aa12.92□□□□□ -0.34
MRPS28-206ENST00000520946 DTWD2Q8NBA8 298 aa12.92□□□□□ -0.34
MRPS28-206ENST00000520946 SLC22A17Q8WUG5 538 aa12.92□□□□□ -0.34
MRPS28-206ENST00000520946 SLKQ9H2G2 1235 aaPredicted RBP12.92□□□□□ -0.34
MRPS28-206ENST00000520946 KCNK12Q9HB15 430 aa12.92□□□□□ -0.34
MRPS28-206ENST00000520946 PIDD1Q9HB75 910 aa12.92□□□□□ -0.34
MRPS28-206ENST00000520946 IGSF9Q9P2J2 1179 aa12.92□□□□□ -0.34
MRPS28-206ENST00000520946 PRPF3O43395 683 aaKnown RBP12.91□□□□□ -0.34
MRPS28-206ENST00000520946 OFD1O75665 1012 aa12.91□□□□□ -0.34
MRPS28-206ENST00000520946 URODP06132 367 aa12.91□□□□□ -0.34
MRPS28-206ENST00000520946 ADH1AP07327 375 aa12.91□□□□□ -0.34
MRPS28-206ENST00000520946 CFHP08603 1231 aa12.91□□□□□ -0.34
MRPS28-206ENST00000520946 SLC11A1P49279 550 aa12.91□□□□□ -0.34
MRPS28-206ENST00000520946 USP11P51784 963 aa12.91□□□□□ -0.34
MRPS28-206ENST00000520946 AK2P54819 239 aa12.91□□□□□ -0.34
MRPS28-206ENST00000520946 IRX6P78412 446 aaPredicted RBP12.91□□□□□ -0.34
MRPS28-206ENST00000520946 NCBP1Q09161 790 aaKnown RBP12.91□□□□□ -0.34
MRPS28-206ENST00000520946 PTPN14Q15678 1187 aa12.91□□□□□ -0.34
MRPS28-206ENST00000520946 TMEM173Q86WV6 379 aaPredicted RBP12.91□□□□□ -0.34
MRPS28-206ENST00000520946 CCDC105Q8IYK2 499 aa12.91□□□□□ -0.34
MRPS28-206ENST00000520946 RDM1Q8NG50 284 aa12.91□□□□□ -0.34
MRPS28-206ENST00000520946 CRYGNQ8WXF5 182 aa12.91□□□□□ -0.34
MRPS28-206ENST00000520946 KLHL5Q96PQ7 755 aa12.91□□□□□ -0.34
MRPS28-206ENST00000520946 SLC26A6Q9BXS9 759 aa12.91□□□□□ -0.34
MRPS28-206ENST00000520946 C22orf23Q9BZE7 217 aa12.91□□□□□ -0.34
MRPS28-206ENST00000520946 UNC45AQ9H3U1 944 aa12.91□□□□□ -0.34
MRPS28-206ENST00000520946 DUSP12Q9UNI6 340 aa12.91□□□□□ -0.34
MRPS28-206ENST00000520946 PCDHB2Q9Y5E7 798 aa12.91□□□□□ -0.34
MRPS28-206ENST00000520946 PI15O43692 258 aa12.9□□□□□ -0.34
MRPS28-206ENST00000520946 MARCH6O60337 910 aa12.9□□□□□ -0.34
MRPS28-206ENST00000520946 CNPP09543 421 aaKnown RBP12.9□□□□□ -0.34
MRPS28-206ENST00000520946 CLCN4P51793 760 aa12.9□□□□□ -0.34
MRPS28-206ENST00000520946 UGCGQ16739 394 aa12.9□□□□□ -0.34
MRPS28-206ENST00000520946 C15orf39Q6ZRI6 1047 aa12.9□□□□□ -0.34
MRPS28-206ENST00000520946 Q6ZUG5 572 aa12.9□□□□□ -0.34
MRPS28-206ENST00000520946 EXOC8Q8IYI6 725 aa12.9□□□□□ -0.34
MRPS28-206ENST00000520946 SLC7A3Q8WY07 619 aa12.9□□□□□ -0.34
MRPS28-206ENST00000520946 PHKBQ93100 1093 aa12.9□□□□□ -0.34
MRPS28-206ENST00000520946 SH2D3AQ9BRG2 576 aa12.9□□□□□ -0.34
MRPS28-206ENST00000520946 TRAIPQ9BWF2 469 aa12.9□□□□□ -0.34
MRPS28-206ENST00000520946 NIFKQ9BYG3 293 aaKnown RBP12.9□□□□□ -0.34
MRPS28-206ENST00000520946 SEMA4AQ9H3S1 761 aa12.9□□□□□ -0.34
MRPS28-206ENST00000520946 RSAD1Q9HA92 442 aa12.9□□□□□ -0.34
MRPS28-206ENST00000520946 FAM217BQ9NTX9 383 aaPredicted RBP12.9□□□□□ -0.34
MRPS28-206ENST00000520946 DNAJB4Q9UDY4 337 aa12.9□□□□□ -0.34
MRPS28-206ENST00000520946 CCDC195A0A1B0GUA6 201 aa12.89□□□□□ -0.35
MRPS28-206ENST00000520946 DKC1O60832 514 aaKnown RBP eCLIP12.89□□□□□ -0.35
MRPS28-206ENST00000520946 ZNF623O75123 536 aa12.89□□□□□ -0.35
MRPS28-206ENST00000520946 POMCP01189 267 aa12.89□□□□□ -0.35
MRPS28-206ENST00000520946 LMNAP02545 664 aaKnown RBP12.89□□□□□ -0.35
MRPS28-206ENST00000520946 SRGAP2CP0DJJ0 459 aa12.89□□□□□ -0.35
MRPS28-206ENST00000520946 MYBP10242 640 aa12.89□□□□□ -0.35
MRPS28-206ENST00000520946 OR1G1P47890 313 aa12.89□□□□□ -0.35
MRPS28-206ENST00000520946 PSMC5P62195 406 aa12.89□□□□□ -0.35
MRPS28-206ENST00000520946 DRP2Q13474 957 aa12.89□□□□□ -0.35
MRPS28-206ENST00000520946 ADCK5Q3MIX3 580 aa12.89□□□□□ -0.35
MRPS28-206ENST00000520946 SPECC1Q5M775 1068 aa12.89□□□□□ -0.35
MRPS28-206ENST00000520946 CWF19L1Q69YN2 538 aaKnown RBP12.89□□□□□ -0.35
MRPS28-206ENST00000520946 ZC3H14Q6PJT7 736 aaKnown RBP12.89□□□□□ -0.35
MRPS28-206ENST00000520946 ZNF280BQ86YH2 543 aa12.89□□□□□ -0.35
MRPS28-206ENST00000520946 TRIM22Q8IYM9 498 aa12.89□□□□□ -0.35
MRPS28-206ENST00000520946 SLC5A5Q92911 643 aa12.89□□□□□ -0.35
MRPS28-206ENST00000520946 BRF1Q92994 677 aa12.89□□□□□ -0.35
MRPS28-206ENST00000520946 TMEM175Q9BSA9 504 aa12.89□□□□□ -0.35
MRPS28-206ENST00000520946 UBN1Q9NPG3 1134 aa12.89□□□□□ -0.35
MRPS28-206ENST00000520946 MAN1C1Q9NR34 630 aa12.89□□□□□ -0.35
MRPS28-206ENST00000520946 VPS54Q9P1Q0 977 aa12.89□□□□□ -0.35
MRPS28-206ENST00000520946 WNT16Q9UBV4 365 aa12.89□□□□□ -0.35
MRPS28-206ENST00000520946 CA14Q9ULX7 337 aa12.89□□□□□ -0.35
MRPS28-206ENST00000520946 PRG3Q9Y2Y8 225 aaPredicted RBP12.89□□□□□ -0.35
MRPS28-206ENST00000520946 TRIOO75962 3097 aa12.89□□□□□ -0.35
MRPS28-206ENST00000520946 PLXNA3P51805 1871 aa12.89□□□□□ -0.35
MRPS28-206ENST00000520946 TMEM150BA6NC51 233 aa12.88□□□□□ -0.35
MRPS28-206ENST00000520946 INPPL1O15357 1258 aa12.88□□□□□ -0.35
MRPS28-206ENST00000520946 ERLIN2O94905 339 aa12.88□□□□□ -0.35
MRPS28-206ENST00000520946 GLUD1P00367 558 aa12.88□□□□□ -0.35
MRPS28-206ENST00000520946 ITGA4P13612 1032 aa12.88□□□□□ -0.35
MRPS28-206ENST00000520946 TARBP2Q15633 366 aaKnown RBP12.88□□□□□ -0.35
MRPS28-206ENST00000520946 BLOC1S2Q6QNY1 142 aa12.88□□□□□ -0.35
MRPS28-206ENST00000520946 CYP26C1Q6V0L0 522 aa12.88□□□□□ -0.35
MRPS28-206ENST00000520946 KSR1Q8IVT5 923 aa12.88□□□□□ -0.35
MRPS28-206ENST00000520946 CNNM3Q8NE01 707 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms