RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 USP40Q9NVE5 1235 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 RGL1Q9NZL6 768 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 IGSF9BQ9UPX0 1349 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 TMEM253P0C7T8 217 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 DLATP10515 647 aaKnown RBP13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 CREB1P16220 341 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 SLC8A3P57103 927 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 NCALDP61601 193 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 EPHA7Q15375 998 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 UBAP2Q5T6F2 1119 aaKnown RBP13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 AP1ARQ63HQ0 302 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 SLC30A10Q6XR72 485 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 CATSPER3Q86XQ3 398 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 COL23A1Q86Y22 540 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 MAGEC3Q8TD91 643 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 CENPTQ96BT3 561 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 ZBTB10Q96DT7 871 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 PITPNM3Q9BZ71 974 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 JMJD4Q9H9V9 463 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 CTNNAL1Q9UBT7 734 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 ARL2BPQ9Y2Y0 163 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 BCL9O00512 1426 aa13.8□□□□□ -0.2
TRAPPC9-208ENST00000520857 PDXKO00764 312 aa13.79□□□□□ -0.2
TRAPPC9-208ENST00000520857 CCND1P24385 295 aa13.79□□□□□ -0.2
TRAPPC9-208ENST00000520857 MXRA7P84157 204 aa13.79□□□□□ -0.2
TRAPPC9-208ENST00000520857 CTTNQ14247 550 aaKnown RBP13.79□□□□□ -0.2
TRAPPC9-208ENST00000520857 KYNUQ16719 465 aa13.79□□□□□ -0.2
TRAPPC9-208ENST00000520857 SGO2Q562F6 1265 aa13.79□□□□□ -0.2
TRAPPC9-208ENST00000520857 LMNTD2Q8IXW0 634 aa13.79□□□□□ -0.2
TRAPPC9-208ENST00000520857 ATP8B4Q8TF62 1192 aa13.79□□□□□ -0.2
TRAPPC9-208ENST00000520857 RPGRQ92834 1020 aaKnown RBP13.79□□□□□ -0.2
TRAPPC9-208ENST00000520857 BTBD6Q96KE9 485 aa13.79□□□□□ -0.2
TRAPPC9-208ENST00000520857 NYXQ9GZU5 481 aa13.79□□□□□ -0.2
TRAPPC9-208ENST00000520857 DDX60Q8IY21 1712 aaKnown RBP13.79□□□□□ -0.2
TRAPPC9-208ENST00000520857 BCRP11274 1271 aa13.79□□□□□ -0.2
TRAPPC9-208ENST00000520857 CNGA2Q16280 664 aa13.79□□□□□ -0.2
TRAPPC9-208ENST00000520857 GSTA5Q7RTV2 222 aa13.79□□□□□ -0.2
TRAPPC9-208ENST00000520857 SLC51AQ86UW1 340 aa13.79□□□□□ -0.2
TRAPPC9-208ENST00000520857 FAM178BQ8IXR5 827 aa13.79□□□□□ -0.2
TRAPPC9-208ENST00000520857 RASGEF1CQ8N431 466 aa13.79□□□□□ -0.2
TRAPPC9-208ENST00000520857 ATXN2LQ8WWM7 1075 aaKnown RBP13.79□□□□□ -0.2
TRAPPC9-208ENST00000520857 BTNL10A8MVZ5 291 aa13.79□□□□□ -0.2
TRAPPC9-208ENST00000520857 hCG_1984214I3L0E3 225 aa13.79□□□□□ -0.2
TRAPPC9-208ENST00000520857 TMED2Q15363 201 aa13.79□□□□□ -0.2
TRAPPC9-208ENST00000520857 C16orf86Q6ZW13 317 aa13.79□□□□□ -0.2
TRAPPC9-208ENST00000520857 ZNF713Q8N859 430 aaPredicted RBP13.79□□□□□ -0.2
TRAPPC9-208ENST00000520857 POP1Q99575 1024 aaKnown RBP13.79□□□□□ -0.2
TRAPPC9-208ENST00000520857 PLVAPQ9BX97 442 aa13.79□□□□□ -0.2
TRAPPC9-208ENST00000520857 ANKRD62A6NC57 917 aa13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 RIPK2O43353 540 aa13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 SMIM24O75264 130 aa13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 COMTP21964 271 aa13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 ZNF131P52739 623 aa13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 RAD23BP54727 409 aa13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 AUHQ13825 339 aaKnown RBP13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 GIT2Q14161 759 aa13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 SLFN12Q8IYM2 578 aa13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 FAXDC2Q96IV6 333 aa13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 RAB3IPQ96QF0 476 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 OSBPL1AQ9BXW6 950 aa13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 RIOX1Q9H6W3 641 aa13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 MTMR4Q9NYA4 1195 aa13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 DIS3Q9Y2L1 958 aaKnown RBP13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 NUDT17P0C025 328 aa13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 KRT15P19012 456 aa13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 HOXA7P31268 230 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 PRKCIP41743 596 aa13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 IRX1P78414 480 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 PALB2Q86YC2 1186 aa13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 PPM1KQ8N3J5 372 aa13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 SLC20A1Q8WUM9 679 aa13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 RUSC1Q9BVN2 902 aa13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 STK33Q9BYT3 514 aa13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 INTS2Q9H0H0 1204 aaKnown RBP13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 PKD2L1Q9P0L9 805 aa13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 A0A0A6YYK5 440 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 TOM1O60784 492 aa13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 TTLL1O95922 423 aa13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 FMO5P49326 533 aa13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 KLRC3Q07444 240 aa13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 ARSHQ5FYA8 562 aa13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 HP1BP3Q5SSJ5 553 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 ODR4Q5SWX8 454 aa13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 ZNF365Q70YC5 407 aa13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 PIGWQ7Z7B1 504 aa13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 RHOT2Q8IXI1 618 aa13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 NAP1L4Q99733 375 aaKnown RBP13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 CDC42EP4Q9H3Q1 356 aaKnown RBP13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 SLC12A4Q9UP95 1085 aa13.78□□□□□ -0.2
TRAPPC9-208ENST00000520857 POC1B-GALNT4F8VUJ3 575 aa13.77□□□□□ -0.2
TRAPPC9-208ENST00000520857 FOXN3O00409 490 aaPredicted RBP13.77□□□□□ -0.2
TRAPPC9-208ENST00000520857 RIMBP2O15034 1052 aa13.77□□□□□ -0.2
TRAPPC9-208ENST00000520857 ZBTB5O15062 677 aa13.77□□□□□ -0.2
TRAPPC9-208ENST00000520857 SPAG7O75391 227 aa13.77□□□□□ -0.2
TRAPPC9-208ENST00000520857 LUC7L3O95232 432 aaKnown RBP13.77□□□□□ -0.2
TRAPPC9-208ENST00000520857 HSPA6P17066 643 aa13.77□□□□□ -0.2
TRAPPC9-208ENST00000520857 ALDH3A1P30838 453 aa13.77□□□□□ -0.2
TRAPPC9-208ENST00000520857 HOXA13P31271 388 aaPredicted RBP13.77□□□□□ -0.2
TRAPPC9-208ENST00000520857 CLUL1Q15846 466 aa13.77□□□□□ -0.2
TRAPPC9-208ENST00000520857 ANKRD20A2Q5SQ80 823 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms