RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 MACROD2A1Z1Q3 448 aa10.84□□□□□ -0.67
SPARC-202ENST00000520687 TESPA1A2RU30 521 aaPredicted RBP10.84□□□□□ -0.67
SPARC-202ENST00000520687 DDX39AO00148 427 aaKnown RBP10.84□□□□□ -0.67
SPARC-202ENST00000520687 CES2O00748 559 aa10.84□□□□□ -0.67
SPARC-202ENST00000520687 ZBTB39O15060 712 aa10.84□□□□□ -0.67
SPARC-202ENST00000520687 KIAA0391O15091 583 aaKnown RBP10.84□□□□□ -0.67
SPARC-202ENST00000520687 CLIC2O15247 247 aa10.84□□□□□ -0.67
SPARC-202ENST00000520687 EIF3JO75822 258 aaKnown RBP10.84□□□□□ -0.67
SPARC-202ENST00000520687 ATP1A1P05023 1023 aaKnown RBP10.84□□□□□ -0.67
SPARC-202ENST00000520687 HIRAP54198 1017 aaPredicted RBP10.84□□□□□ -0.67
SPARC-202ENST00000520687 BFSP1Q12934 665 aa10.84□□□□□ -0.67
SPARC-202ENST00000520687 TMEM132BQ14DG7 1078 aa10.84□□□□□ -0.67
SPARC-202ENST00000520687 MAP9Q49MG5 647 aa10.84□□□□□ -0.67
SPARC-202ENST00000520687 ZC2HC1CQ53FD0 456 aaPredicted RBP10.84□□□□□ -0.67
SPARC-202ENST00000520687 SMYD5Q6GMV2 418 aa10.84□□□□□ -0.67
SPARC-202ENST00000520687 GPR153Q6NV75 609 aa10.84□□□□□ -0.67
SPARC-202ENST00000520687 CC2D1AQ6P1N0 951 aaPredicted RBP10.84□□□□□ -0.67
SPARC-202ENST00000520687 HAUS6Q7Z4H7 955 aa10.84□□□□□ -0.67
SPARC-202ENST00000520687 XXYLT1Q8NBI6 393 aa10.84□□□□□ -0.67
SPARC-202ENST00000520687 FAM81BQ96LP2 452 aa10.84□□□□□ -0.67
SPARC-202ENST00000520687 MPHOSPH6Q99547 160 aaKnown RBP10.84□□□□□ -0.67
SPARC-202ENST00000520687 CYP39A1Q9NYL5 469 aa10.84□□□□□ -0.67
SPARC-202ENST00000520687 TRIM10Q9UDY6 481 aa10.84□□□□□ -0.67
SPARC-202ENST00000520687 PUF60Q9UHX1 559 aaKnown RBP10.84□□□□□ -0.67
SPARC-202ENST00000520687 POLR2AP24928 1970 aaKnown RBP10.84□□□□□ -0.67
SPARC-202ENST00000520687 DGAT1O75907 488 aa10.83□□□□□ -0.68
SPARC-202ENST00000520687 SLC9A1P19634 815 aa10.83□□□□□ -0.68
SPARC-202ENST00000520687 GTF2H1P32780 548 aa10.83□□□□□ -0.68
SPARC-202ENST00000520687 PLA2G5P39877 138 aa10.83□□□□□ -0.68
SPARC-202ENST00000520687 PAFAH1B1P43034 410 aa10.83□□□□□ -0.68
SPARC-202ENST00000520687 CASP4P49662 377 aa10.83□□□□□ -0.68
SPARC-202ENST00000520687 NPEPPSP55786 919 aa10.83□□□□□ -0.68
SPARC-202ENST00000520687 GFPT1Q06210 699 aaPredicted RBP10.83□□□□□ -0.68
SPARC-202ENST00000520687 KCNA1Q09470 495 aa10.83□□□□□ -0.68
SPARC-202ENST00000520687 GPS2Q13227 327 aa10.83□□□□□ -0.68
SPARC-202ENST00000520687 DMP1Q13316 513 aaPredicted RBP10.83□□□□□ -0.68
SPARC-202ENST00000520687 STXBP2Q15833 593 aa10.83□□□□□ -0.68
SPARC-202ENST00000520687 XKR9Q5GH70 373 aa10.83□□□□□ -0.68
SPARC-202ENST00000520687 MIS18BP1Q6P0N0 1132 aa10.83□□□□□ -0.68
SPARC-202ENST00000520687 LBX2Q6XYB7 198 aa10.83□□□□□ -0.68
SPARC-202ENST00000520687 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.83□□□□□ -0.68
SPARC-202ENST00000520687 FAM133AQ8N9E0 248 aa10.83□□□□□ -0.68
SPARC-202ENST00000520687 PROCA1Q8NCQ7 364 aaPredicted RBP10.83□□□□□ -0.68
SPARC-202ENST00000520687 DCPSQ96C86 337 aaKnown RBP10.83□□□□□ -0.68
SPARC-202ENST00000520687 PRO3102Q9H379 93 aa10.83□□□□□ -0.68
SPARC-202ENST00000520687 SIX2Q9NPC8 291 aa10.83□□□□□ -0.68
SPARC-202ENST00000520687 SLC9A2Q9UBY0 812 aa10.83□□□□□ -0.68
SPARC-202ENST00000520687 PCDHGC5Q9Y5F6 944 aa10.83□□□□□ -0.68
SPARC-202ENST00000520687 CSADQ9Y600 493 aa10.83□□□□□ -0.68
SPARC-202ENST00000520687 LOC102724159A0A0B4J2E5 919 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 GRID2IPA4D2P6 1211 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 SPDYE16A6NNV3 312 aaPredicted RBP10.82□□□□□ -0.68
SPARC-202ENST00000520687 CXCL11O14625 94 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 USP2O75604 605 aaPredicted RBP10.82□□□□□ -0.68
SPARC-202ENST00000520687 CCNE2O96020 404 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 PNMA6AP0CW24 399 aaPredicted RBP10.82□□□□□ -0.68
SPARC-202ENST00000520687 KCNA2P16389 499 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 SOX5P35711 763 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 IREB2P48200 963 aaKnown RBP10.82□□□□□ -0.68
SPARC-202ENST00000520687 CYP2J2P51589 502 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 VAMP7P51809 220 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 MYL7Q01449 175 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 PWP2Q15269 919 aaKnown RBP10.82□□□□□ -0.68
SPARC-202ENST00000520687 KIAA0753Q2KHM9 967 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 GLE1Q53GS7 698 aaKnown RBP10.82□□□□□ -0.68
SPARC-202ENST00000520687 XKR3Q5GH77 459 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 HDXQ7Z353 690 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 RIOX2Q8IUF8 465 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 MMGT1Q8N4V1 131 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 CAGE1Q8TC20 777 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 TRPM4Q8TD43 1214 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.82□□□□□ -0.68
SPARC-202ENST00000520687 INTS2Q9H0H0 1204 aaKnown RBP10.82□□□□□ -0.68
SPARC-202ENST00000520687 ACBD3Q9H3P7 528 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 ANKZF1Q9H8Y5 726 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 KIAA1586Q9HCI6 787 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 JPH1Q9HDC5 661 aaPredicted RBP10.82□□□□□ -0.68
SPARC-202ENST00000520687 ZNF446Q9NWS9 450 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 PKD2L1Q9P0L9 805 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 APEX2Q9UBZ4 518 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 ZHX1Q9UKY1 873 aaPredicted RBP10.82□□□□□ -0.68
SPARC-202ENST00000520687 RIPK3Q9Y572 518 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 FHOD1Q9Y613 1164 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 KIAA0100Q14667 2235 aaKnown RBP10.82□□□□□ -0.68
SPARC-202ENST00000520687 A0A087X0T9 212 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 BACH1O14867 736 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 ATP9AO75110 1047 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 MOCS3O95396 460 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 FAM228BP0C875 321 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 TGFB3P10600 412 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 TM4SF4P48230 202 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 PTK2Q05397 1052 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 PPATQ06203 517 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 BRDTQ58F21 947 aaPredicted RBP10.82□□□□□ -0.68
SPARC-202ENST00000520687 KCNV1Q6PIU1 500 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 MAP4K3Q8IVH8 894 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 SULF1Q8IWU6 871 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 EXOC8Q8IYI6 725 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 SYCE1Q8N0S2 351 aa10.82□□□□□ -0.68
SPARC-202ENST00000520687 TMC2Q8TDI7 906 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms