RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 HOXA2O43364 376 aa9.08□□□□□ -0.96
CSMD1-209ENST00000520630 HBP1O60381 514 aa9.08□□□□□ -0.96
CSMD1-209ENST00000520630 CSDE1O75534 798 aaKnown RBP9.08□□□□□ -0.96
CSMD1-209ENST00000520630 SDHBP21912 280 aa9.08□□□□□ -0.96
CSMD1-209ENST00000520630 GBP2P32456 591 aaPredicted RBP9.08□□□□□ -0.96
CSMD1-209ENST00000520630 HSPA4P34932 840 aa9.08□□□□□ -0.96
CSMD1-209ENST00000520630 SLC11A1P49279 550 aa9.08□□□□□ -0.96
CSMD1-209ENST00000520630 GPC5P78333 572 aa9.08□□□□□ -0.96
CSMD1-209ENST00000520630 NECTIN1Q15223 517 aa9.08□□□□□ -0.96
CSMD1-209ENST00000520630 TAS1R1Q7RTX1 841 aa9.08□□□□□ -0.96
CSMD1-209ENST00000520630 ZNF280BQ86YH2 543 aa9.08□□□□□ -0.96
CSMD1-209ENST00000520630 BBXQ8WY36 941 aaPredicted RBP9.08□□□□□ -0.96
CSMD1-209ENST00000520630 FGF14Q92915 247 aa9.08□□□□□ -0.96
CSMD1-209ENST00000520630 KCNB2Q92953 911 aa9.08□□□□□ -0.96
CSMD1-209ENST00000520630 LPPQ93052 612 aa9.08□□□□□ -0.96
CSMD1-209ENST00000520630 TMEM169Q96HH4 297 aa9.08□□□□□ -0.96
CSMD1-209ENST00000520630 CHAMP1Q96JM3 812 aa9.08□□□□□ -0.96
CSMD1-209ENST00000520630 CDHR1Q96JP9 859 aa9.08□□□□□ -0.96
CSMD1-209ENST00000520630 MXRA8Q9BRK3 442 aa9.08□□□□□ -0.96
CSMD1-209ENST00000520630 UBAC1Q9BSL1 405 aa9.08□□□□□ -0.96
CSMD1-209ENST00000520630 RHOBTB2Q9BYZ6 727 aa9.08□□□□□ -0.96
CSMD1-209ENST00000520630 MAN1C1Q9NR34 630 aa9.08□□□□□ -0.96
CSMD1-209ENST00000520630 TBC1D13Q9NVG8 400 aa9.08□□□□□ -0.96
CSMD1-209ENST00000520630 FBXO4Q9UKT5 387 aa9.08□□□□□ -0.96
CSMD1-209ENST00000520630 PCDHGA2Q9Y5H1 932 aa9.08□□□□□ -0.96
CSMD1-209ENST00000520630 THADAQ6YHU6 1953 aa9.08□□□□□ -0.96
CSMD1-209ENST00000520630 SHROOM3Q8TF72 1996 aa9.08□□□□□ -0.96
CSMD1-209ENST00000520630 ADAMTS9Q9P2N4 1935 aa9.07□□□□□ -0.96
CSMD1-209ENST00000520630 MAFGO15525 162 aa9.07□□□□□ -0.96
CSMD1-209ENST00000520630 GDF9O60383 454 aa9.07□□□□□ -0.96
CSMD1-209ENST00000520630 ZC3H11AO75152 810 aaKnown RBP eCLIP9.07□□□□□ -0.96
CSMD1-209ENST00000520630 DDHD2O94830 711 aa9.07□□□□□ -0.96
CSMD1-209ENST00000520630 LAMP2P13473 410 aa9.07□□□□□ -0.96
CSMD1-209ENST00000520630 CD72P21854 359 aa9.07□□□□□ -0.96
CSMD1-209ENST00000520630 PMLP29590 882 aa9.07□□□□□ -0.96
CSMD1-209ENST00000520630 ALDH7A1P49419 539 aaKnown RBP9.07□□□□□ -0.96
CSMD1-209ENST00000520630 CLCN3P51790 818 aa9.07□□□□□ -0.96
CSMD1-209ENST00000520630 ANTXR2P58335 489 aa9.07□□□□□ -0.96
CSMD1-209ENST00000520630 NLRP11P59045 1033 aaKnown RBP9.07□□□□□ -0.96
CSMD1-209ENST00000520630 LMNB2Q03252 620 aa9.07□□□□□ -0.96
CSMD1-209ENST00000520630 CSTF1Q05048 431 aaKnown RBP9.07□□□□□ -0.96
CSMD1-209ENST00000520630 SPEM2Q0P670 501 aa9.07□□□□□ -0.96
CSMD1-209ENST00000520630 SNW1Q13573 536 aaKnown RBP9.07□□□□□ -0.96
CSMD1-209ENST00000520630 GIT2Q14161 759 aa9.07□□□□□ -0.96
CSMD1-209ENST00000520630 LONRF3Q496Y0 759 aa9.07□□□□□ -0.96
CSMD1-209ENST00000520630 SRBD1Q8N5C6 995 aaKnown RBP9.07□□□□□ -0.96
CSMD1-209ENST00000520630 GPR161Q8N6U8 529 aaKnown RBP9.07□□□□□ -0.96
CSMD1-209ENST00000520630 RNF169Q8NCN4 708 aa9.07□□□□□ -0.96
CSMD1-209ENST00000520630 DSCC1Q9BVC3 393 aa9.07□□□□□ -0.96
CSMD1-209ENST00000520630 SPZ1Q9BXG8 430 aa9.07□□□□□ -0.96
CSMD1-209ENST00000520630 KRT23Q9C075 422 aa9.07□□□□□ -0.96
CSMD1-209ENST00000520630 AZI2Q9H6S1 392 aa9.07□□□□□ -0.96
CSMD1-209ENST00000520630 AGO4Q9HCK5 861 aaKnown RBP9.07□□□□□ -0.96
CSMD1-209ENST00000520630 PCDHA6Q9UN73 950 aa9.07□□□□□ -0.96
CSMD1-209ENST00000520630 PCDHA8Q9Y5H6 950 aa9.07□□□□□ -0.96
CSMD1-209ENST00000520630 RBM8AQ9Y5S9 174 aaKnown RBP9.07□□□□□ -0.96
CSMD1-209ENST00000520630 NUMBLQ9Y6R0 609 aa9.07□□□□□ -0.96
CSMD1-209ENST00000520630 TNRC6BQ9UPQ9 1833 aaKnown RBP9.07□□□□□ -0.96
CSMD1-209ENST00000520630 ABCA7Q8IZY2 2146 aa9.07□□□□□ -0.96
CSMD1-209ENST00000520630 PLXNB3Q9ULL4 1909 aa9.06□□□□□ -0.96
CSMD1-209ENST00000520630 hCG_1642624A0A1W2PR95 340 aa9.06□□□□□ -0.96
CSMD1-209ENST00000520630 KANSL1LA0AUZ9 987 aa9.06□□□□□ -0.96
CSMD1-209ENST00000520630 TM4SF5O14894 197 aa9.06□□□□□ -0.96
CSMD1-209ENST00000520630 INPPL1O15357 1258 aa9.06□□□□□ -0.96
CSMD1-209ENST00000520630 OFD1O75665 1012 aa9.06□□□□□ -0.96
CSMD1-209ENST00000520630 PLEKHA8P1O95397 391 aa9.06□□□□□ -0.96
CSMD1-209ENST00000520630 SSBP05455 408 aaKnown RBP eCLIP9.06□□□□□ -0.96
CSMD1-209ENST00000520630 SPATA31D3P0C874 917 aa9.06□□□□□ -0.96
CSMD1-209ENST00000520630 EIF4BP23588 611 aaKnown RBP9.06□□□□□ -0.96
CSMD1-209ENST00000520630 KLRC2P26717 231 aa9.06□□□□□ -0.96
CSMD1-209ENST00000520630 ANAPC15P60006 121 aa9.06□□□□□ -0.96
CSMD1-209ENST00000520630 TRAF1Q13077 416 aa9.06□□□□□ -0.96
CSMD1-209ENST00000520630 ZNF484Q5JVG2 852 aa9.06□□□□□ -0.96
CSMD1-209ENST00000520630 ODR4Q5SWX8 454 aa9.06□□□□□ -0.96
CSMD1-209ENST00000520630 CREB3L3Q68CJ9 461 aa9.06□□□□□ -0.96
CSMD1-209ENST00000520630 TYW1BQ6NUM6 668 aa9.06□□□□□ -0.96
CSMD1-209ENST00000520630 PARM1Q6UWI2 310 aa9.06□□□□□ -0.96
CSMD1-209ENST00000520630 SPATA31D4Q6ZUB0 917 aa9.06□□□□□ -0.96
CSMD1-209ENST00000520630 PPFIBP1Q86W92 1011 aa9.06□□□□□ -0.96
CSMD1-209ENST00000520630 RNF168Q8IYW5 571 aaPredicted RBP9.06□□□□□ -0.96
CSMD1-209ENST00000520630 RASEFQ8IZ41 740 aa9.06□□□□□ -0.96
CSMD1-209ENST00000520630 ABI1Q8IZP0 508 aa9.06□□□□□ -0.96
CSMD1-209ENST00000520630 ZNF687Q8N1G0 1237 aa9.06□□□□□ -0.96
CSMD1-209ENST00000520630 CMTR1Q8N1G2 835 aaKnown RBP9.06□□□□□ -0.96
CSMD1-209ENST00000520630 IGDCC4Q8TDY8 1250 aa9.06□□□□□ -0.96
CSMD1-209ENST00000520630 NXPE3Q969Y0 559 aa9.06□□□□□ -0.96
CSMD1-209ENST00000520630 CLDN23Q96B33 292 aa9.06□□□□□ -0.96
CSMD1-209ENST00000520630 PGBD1Q96JS3 809 aa9.06□□□□□ -0.96
CSMD1-209ENST00000520630 MYL10Q9BUA6 226 aa9.06□□□□□ -0.96
CSMD1-209ENST00000520630 PRMT8Q9NR22 394 aaPredicted RBP9.06□□□□□ -0.96
CSMD1-209ENST00000520630 SPATA6Q9NWH7 488 aaPredicted RBP9.06□□□□□ -0.96
CSMD1-209ENST00000520630 ZSCAN32Q9NX65 697 aa9.06□□□□□ -0.96
CSMD1-209ENST00000520630 USP18Q9UMW8 372 aa9.06□□□□□ -0.96
CSMD1-209ENST00000520630 SNX14Q9Y5W7 946 aa9.06□□□□□ -0.96
CSMD1-209ENST00000520630 FREM2Q5SZK8 3169 aa9.06□□□□□ -0.96
CSMD1-209ENST00000520630 NUP210Q8TEM1 1887 aaPredicted RBP9.06□□□□□ -0.96
CSMD1-209ENST00000520630 IGSF10Q6WRI0 2623 aa9.05□□□□□ -0.96
CSMD1-209ENST00000520630 CELSR3Q9NYQ7 3312 aa9.05□□□□□ -0.96
CSMD1-209ENST00000520630 F8W810 466 aa9.05□□□□□ -0.96
CSMD1-209ENST00000520630 DDX39AO00148 427 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms