RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 DNAJC9Q8WXX5 260 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 CUEDC2Q9H467 287 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 AASDHPPTQ9NRN7 309 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 FAM114A2Q9NRY5 505 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 BMP2KQ9NSY1 1161 aaPredicted RBP10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 PCMTD2Q9NV79 361 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 NKIRAS1Q9NYS0 192 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 CEP72Q9P209 647 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 ADAMTS13Q76LX8 1427 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 MYH7BA7E2Y1 1941 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 ALDH3A1P30838 453 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 CYP4A11Q02928 519 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 ZBTB16Q05516 673 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 ITIH3Q06033 890 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 NONOQ15233 471 aaKnown RBP eCLIP10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 GBP7Q8N8V2 638 aaPredicted RBP10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 NDNQ99608 321 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 RNF14Q9UBS8 474 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 SLC12A4Q9UP95 1085 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 KIAA1024Q9UPX6 916 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 SLC4A7Q9Y6M7 1214 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 NWD1Q149M9 1564 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 TCRBV7S2A1N4TA0A589 114 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 TRIM43BA6NCK2 446 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 TXNDC9O14530 226 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 GHRP10912 638 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 GNAT2P19087 354 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 KCNA3P22001 575 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 STAT3P40763 770 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 VPS36Q86VN1 386 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 C4orf32Q8N8J7 132 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 GPR101Q96P66 508 aaPredicted RBP10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 KLF6Q99612 283 aaPredicted RBP10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 MYLK2Q9H1R3 596 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 C12orf65Q9H3J6 166 aaKnown RBP10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 USP40Q9NVE5 1235 aa10.83□□□□□ -0.68
PDGFRB-207ENST00000520579 SMARCA1P28370 1054 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 FKBP3Q00688 224 aaKnown RBP10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 KLC1Q07866 573 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 CALCOCO2Q13137 446 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 MTMR2Q13614 643 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 CNGA2Q16280 664 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 GRAMD4Q6IC98 578 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 CCHCR1Q8TD31 782 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 ATG4AQ8WYN0 398 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 SLC7A5P2Q9GIP4 190 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 NT5C3AQ9H0P0 336 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 NAGPAQ9UK23 515 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 HDAC9Q9UKV0 1011 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 FAM196BA6NMK8 535 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 TMCC1O94876 653 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 MLH1P40692 756 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 RPL21P46778 160 aaKnown RBP10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 CTTNQ14247 550 aaKnown RBP10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 IFI16Q16666 785 aaKnown RBP10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 SMUG1Q53HV7 270 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 CFAP157Q5JU67 520 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 EXOC3L1Q86VI1 746 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 LCA5Q86VQ0 697 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 NLRP10Q86W26 655 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 GPBP1Q86WP2 473 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 KRT35Q92764 455 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 PBKQ96KB5 322 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 PIGSQ96S52 555 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 SLX1AQ9BQ83 275 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 PAGR1Q9BTK6 254 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 TAS2R14Q9NYV8 317 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 AJAP1Q9UKB5 411 aaPredicted RBP10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 HEG1Q9ULI3 1381 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 MAP3K15Q6ZN16 1313 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 A0A1W2PQJ5 194 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 C5orf60A6NFR6 353 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 KLRF2D3W0D1 207 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 GOLGA8RI6L899 631 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 SPOPO43791 374 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 FLOT1O75955 427 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 DLATP10515 647 aaKnown RBP10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 TNFRSF8P28908 595 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 COASYQ13057 564 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 KIAA1755Q5JYT7 1200 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 OLFML2BQ68BL8 750 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 RFWD3Q6PCD5 774 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 SLC43A3Q8NBI5 491 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 SLC35G2Q8TBE7 412 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 LRRC8CQ8TDW0 803 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 SCFD2Q8WU76 684 aa10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 PABPC3Q9H361 631 aaKnown RBP10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 R3HDM2Q9Y2K5 976 aaKnown RBP10.82□□□□□ -0.68
PDGFRB-207ENST00000520579 RGPD1P0DJD0 1748 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 IGSF9BQ9UPX0 1349 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 THAP12O43422 761 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 SLC37A4O43826 429 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 PTDSS1P48651 473 aaKnown RBP10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 PABPC4Q13310 644 aaKnown RBP eCLIP10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 GRB10Q13322 594 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 SLMAPQ14BN4 828 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 TMEM266Q2M3C6 531 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 TAOK1Q7L7X3 1001 aa10.81□□□□□ -0.68
PDGFRB-207ENST00000520579 ZNF444Q8N0Y2 327 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms