RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 S1PR5Q9H228 398 aa16.98■□□□□ 0.31
CSMD1-207ENST00000520451 BMP2KQ9NSY1 1161 aaPredicted RBP16.98■□□□□ 0.31
CSMD1-207ENST00000520451 FAM105AQ9NUU6 356 aa16.98■□□□□ 0.31
CSMD1-207ENST00000520451 INPP5FQ9Y2H2 1132 aa16.98■□□□□ 0.31
CSMD1-207ENST00000520451 C2orf71A6NGG8 1288 aa16.97■□□□□ 0.31
CSMD1-207ENST00000520451 RFC5P40937 340 aa16.97■□□□□ 0.31
CSMD1-207ENST00000520451 AK2P54819 239 aa16.97■□□□□ 0.31
CSMD1-207ENST00000520451 ANAPC15P60006 121 aa16.97■□□□□ 0.31
CSMD1-207ENST00000520451 EPHA7Q15375 998 aa16.97■□□□□ 0.31
CSMD1-207ENST00000520451 EARS2Q5JPH6 523 aaKnown RBP16.97■□□□□ 0.31
CSMD1-207ENST00000520451 SYCE2Q6PIF2 218 aa16.97■□□□□ 0.31
CSMD1-207ENST00000520451 EXOC8Q8IYI6 725 aa16.97■□□□□ 0.31
CSMD1-207ENST00000520451 MRPL43Q8N983 215 aaKnown RBP16.97■□□□□ 0.31
CSMD1-207ENST00000520451 PSPC1Q8WXF1 523 aaKnown RBP16.97■□□□□ 0.31
CSMD1-207ENST00000520451 RSPH1Q8WYR4 309 aa16.97■□□□□ 0.31
CSMD1-207ENST00000520451 CASP10Q92851 521 aa16.97■□□□□ 0.31
CSMD1-207ENST00000520451 TMEM143Q96AN5 459 aa16.97■□□□□ 0.31
CSMD1-207ENST00000520451 DHX33Q9H6R0 707 aaKnown RBP16.97■□□□□ 0.31
CSMD1-207ENST00000520451 IFT122Q9HBG6 1241 aa16.97■□□□□ 0.31
CSMD1-207ENST00000520451 RGL1Q9NZL6 768 aa16.97■□□□□ 0.31
CSMD1-207ENST00000520451 PPME1Q9Y570 386 aa16.97■□□□□ 0.31
CSMD1-207ENST00000520451 FAM205CA6NFA0 338 aa16.96■□□□□ 0.31
CSMD1-207ENST00000520451 MEIS3P2A8K0S8 358 aa16.96■□□□□ 0.31
CSMD1-207ENST00000520451 SRGAP2CP0DJJ0 459 aa16.96■□□□□ 0.31
CSMD1-207ENST00000520451 HOXB8P17481 243 aaPredicted RBP16.96■□□□□ 0.31
CSMD1-207ENST00000520451 YWHABP31946 246 aaKnown RBP16.96■□□□□ 0.31
CSMD1-207ENST00000520451 KRT2P35908 639 aa16.96■□□□□ 0.31
CSMD1-207ENST00000520451 NR5A1Q13285 461 aa16.96■□□□□ 0.31
CSMD1-207ENST00000520451 BMS1Q14692 1282 aaKnown RBP16.96■□□□□ 0.31
CSMD1-207ENST00000520451 NOMO2Q5JPE7 1267 aa16.96■□□□□ 0.31
CSMD1-207ENST00000520451 TMEM173Q86WV6 379 aaPredicted RBP16.96■□□□□ 0.31
CSMD1-207ENST00000520451 C4orf19Q8IY42 314 aa16.96■□□□□ 0.31
CSMD1-207ENST00000520451 NECAB1Q8N987 351 aa16.96■□□□□ 0.31
CSMD1-207ENST00000520451 PRPF31Q8WWY3 499 aaKnown RBP16.96■□□□□ 0.31
CSMD1-207ENST00000520451 DYDC2Q96IM9 177 aa16.96■□□□□ 0.31
CSMD1-207ENST00000520451 MFSD14AQ96MC6 490 aa16.96■□□□□ 0.31
CSMD1-207ENST00000520451 BRMS1Q9HCU9 246 aa16.96■□□□□ 0.31
CSMD1-207ENST00000520451 AGPAT5Q9NUQ2 364 aa16.96■□□□□ 0.31
CSMD1-207ENST00000520451 TBC1D13Q9NVG8 400 aa16.96■□□□□ 0.31
CSMD1-207ENST00000520451 HCFC2Q9Y5Z7 792 aa16.96■□□□□ 0.31
CSMD1-207ENST00000520451 WDFY4Q6ZS81 3184 aa16.96■□□□□ 0.31
CSMD1-207ENST00000520451 CLASP2O75122 1294 aaKnown RBP16.95■□□□□ 0.3
CSMD1-207ENST00000520451 ZNF623O75123 536 aa16.95■□□□□ 0.3
CSMD1-207ENST00000520451 OFD1O75665 1012 aa16.95■□□□□ 0.3
CSMD1-207ENST00000520451 BAG4O95429 457 aaKnown RBP16.95■□□□□ 0.3
CSMD1-207ENST00000520451 CXCL14O95715 111 aa16.95■□□□□ 0.3
CSMD1-207ENST00000520451 ZXDAP98168 799 aa16.95■□□□□ 0.3
CSMD1-207ENST00000520451 CYP4A11Q02928 519 aa16.95■□□□□ 0.3
CSMD1-207ENST00000520451 RNASELQ05823 741 aaKnown RBP16.95■□□□□ 0.3
CSMD1-207ENST00000520451 SPIRE1Q08AE8 756 aa16.95■□□□□ 0.3
CSMD1-207ENST00000520451 LAMTOR4Q0VGL1 99 aa16.95■□□□□ 0.3
CSMD1-207ENST00000520451 CTTNQ14247 550 aaKnown RBP16.95■□□□□ 0.3
CSMD1-207ENST00000520451 EMC2Q15006 297 aa16.95■□□□□ 0.3
CSMD1-207ENST00000520451 TPRNQ4KMQ1 711 aa16.95■□□□□ 0.3
CSMD1-207ENST00000520451 TRIM67Q6ZTA4 783 aa16.95■□□□□ 0.3
CSMD1-207ENST00000520451 OTUD6AQ7L8S5 288 aa16.95■□□□□ 0.3
CSMD1-207ENST00000520451 SRGAP1Q7Z6B7 1085 aa16.95■□□□□ 0.3
CSMD1-207ENST00000520451 SLFN12Q8IYM2 578 aa16.95■□□□□ 0.3
CSMD1-207ENST00000520451 VPS52Q8N1B4 723 aa16.95■□□□□ 0.3
CSMD1-207ENST00000520451 PGBD4Q96DM1 585 aa16.95■□□□□ 0.3
CSMD1-207ENST00000520451 GBP3Q9H0R5 595 aa16.95■□□□□ 0.3
CSMD1-207ENST00000520451 ZBP1Q9H171 429 aa16.95■□□□□ 0.3
CSMD1-207ENST00000520451 ZSWIM4Q9H7M6 989 aa16.95■□□□□ 0.3
CSMD1-207ENST00000520451 NRDE2Q9H7Z3 1164 aa16.95■□□□□ 0.3
CSMD1-207ENST00000520451 PCDHB2Q9Y5E7 798 aa16.95■□□□□ 0.3
CSMD1-207ENST00000520451 TECTAO75443 2155 aa16.95■□□□□ 0.3
CSMD1-207ENST00000520451 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.94■□□□□ 0.3
CSMD1-207ENST00000520451 CARNS1A5YM72 827 aa16.94■□□□□ 0.3
CSMD1-207ENST00000520451 TMEM221A6NGB7 291 aa16.94■□□□□ 0.3
CSMD1-207ENST00000520451 M0R296 226 aa16.94■□□□□ 0.3
CSMD1-207ENST00000520451 GAS2O43903 313 aaKnown RBP16.94■□□□□ 0.3
CSMD1-207ENST00000520451 FDPSP14324 419 aaKnown RBP16.94■□□□□ 0.3
CSMD1-207ENST00000520451 SP100P23497 879 aaPredicted RBP16.94■□□□□ 0.3
CSMD1-207ENST00000520451 XKR9Q5GH70 373 aa16.94■□□□□ 0.3
CSMD1-207ENST00000520451 TMEM87AQ8NBN3 555 aa16.94■□□□□ 0.3
CSMD1-207ENST00000520451 URGCPQ8TCY9 931 aa16.94■□□□□ 0.3
CSMD1-207ENST00000520451 TCP11Q8WWU5 503 aa16.94■□□□□ 0.3
CSMD1-207ENST00000520451 AUTS2Q8WXX7 1259 aa16.94■□□□□ 0.3
CSMD1-207ENST00000520451 GTF3C6Q969F1 213 aa16.94■□□□□ 0.3
CSMD1-207ENST00000520451 IGSF21Q96ID5 467 aa16.94■□□□□ 0.3
CSMD1-207ENST00000520451 MINDY3Q9H8M7 445 aa16.94■□□□□ 0.3
CSMD1-207ENST00000520451 ZBTB39O15060 712 aa16.93■□□□□ 0.3
CSMD1-207ENST00000520451 LARGE1O95461 756 aa16.93■□□□□ 0.3
CSMD1-207ENST00000520451 GALTP07902 379 aa16.93■□□□□ 0.3
CSMD1-207ENST00000520451 SLC11A1P49279 550 aa16.93■□□□□ 0.3
CSMD1-207ENST00000520451 ME3Q16798 604 aa16.93■□□□□ 0.3
CSMD1-207ENST00000520451 AGMOQ6ZNB7 445 aa16.93■□□□□ 0.3
CSMD1-207ENST00000520451 DDX53Q86TM3 631 aaKnown RBP16.93■□□□□ 0.3
CSMD1-207ENST00000520451 FERMT3Q86UX7 667 aa16.93■□□□□ 0.3
CSMD1-207ENST00000520451 TPH2Q8IWU9 490 aa16.93■□□□□ 0.3
CSMD1-207ENST00000520451 RNF149Q8NC42 400 aa16.93■□□□□ 0.3
CSMD1-207ENST00000520451 BCL7CQ8WUZ0 217 aaPredicted RBP16.93■□□□□ 0.3
CSMD1-207ENST00000520451 TNFRSF25Q93038 417 aa16.93■□□□□ 0.3
CSMD1-207ENST00000520451 FBXL18Q96ME1 805 aa16.93■□□□□ 0.3
CSMD1-207ENST00000520451 KCNH6Q9H252 994 aa16.93■□□□□ 0.3
CSMD1-207ENST00000520451 DNAJB4Q9UDY4 337 aa16.93■□□□□ 0.3
CSMD1-207ENST00000520451 CDH22Q9UJ99 828 aa16.93■□□□□ 0.3
CSMD1-207ENST00000520451 PIEZO1Q92508 2521 aa16.93■□□□□ 0.3
CSMD1-207ENST00000520451 ASAP2O43150 1006 aa16.92■□□□□ 0.3
CSMD1-207ENST00000520451 HOXA11P31270 313 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms