RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 ARSHQ5FYA8 562 aa12.77□□□□□ -0.37
SPIDR-212ENST00000519661 CNNM4Q6P4Q7 775 aa12.77□□□□□ -0.37
SPIDR-212ENST00000519661 USP49Q70CQ1 688 aa12.77□□□□□ -0.37
SPIDR-212ENST00000519661 BSNDQ8WZ55 320 aa12.77□□□□□ -0.37
SPIDR-212ENST00000519661 CALML4Q96GE6 196 aa12.77□□□□□ -0.37
SPIDR-212ENST00000519661 DRC1Q96MC2 740 aa12.77□□□□□ -0.37
SPIDR-212ENST00000519661 NLRP4Q96MN2 994 aa12.77□□□□□ -0.37
SPIDR-212ENST00000519661 RUSC1Q9BVN2 902 aa12.77□□□□□ -0.37
SPIDR-212ENST00000519661 NKX2-4Q9H2Z4 354 aa12.77□□□□□ -0.37
SPIDR-212ENST00000519661 GPRC5CQ9NQ84 441 aa12.77□□□□□ -0.37
SPIDR-212ENST00000519661 RNF19AQ9NV58 838 aa12.77□□□□□ -0.37
SPIDR-212ENST00000519661 LMCD1Q9NZU5 365 aa12.77□□□□□ -0.37
SPIDR-212ENST00000519661 GINS2Q9Y248 185 aa12.77□□□□□ -0.37
SPIDR-212ENST00000519661 STXBP5LQ9Y2K9 1186 aa12.77□□□□□ -0.37
SPIDR-212ENST00000519661 CNTNAP2Q9UHC6 1331 aa12.77□□□□□ -0.37
SPIDR-212ENST00000519661 GBF1Q92538 1859 aa12.76□□□□□ -0.37
SPIDR-212ENST00000519661 FAM237AA0A1B0GTK4 181 aa12.76□□□□□ -0.37
SPIDR-212ENST00000519661 DENND3A2RUS2 1198 aa12.76□□□□□ -0.37
SPIDR-212ENST00000519661 CUTAO60888 179 aa12.76□□□□□ -0.37
SPIDR-212ENST00000519661 PLA2G4BP0C869 781 aa12.76□□□□□ -0.37
SPIDR-212ENST00000519661 MYOGP15173 224 aa12.76□□□□□ -0.37
SPIDR-212ENST00000519661 ZSCAN20P17040 1043 aaPredicted RBP12.76□□□□□ -0.37
SPIDR-212ENST00000519661 PLCG1P19174 1290 aa12.76□□□□□ -0.37
SPIDR-212ENST00000519661 MARCKSP29966 332 aaPredicted RBP12.76□□□□□ -0.37
SPIDR-212ENST00000519661 GRIN2CQ14957 1233 aa12.76□□□□□ -0.37
SPIDR-212ENST00000519661 E2F4Q16254 413 aa12.76□□□□□ -0.37
SPIDR-212ENST00000519661 UBXN11Q5T124 520 aa12.76□□□□□ -0.37
SPIDR-212ENST00000519661 PPP2R2DQ66LE6 453 aa12.76□□□□□ -0.37
SPIDR-212ENST00000519661 ECHDC2Q86YB7 292 aa12.76□□□□□ -0.37
SPIDR-212ENST00000519661 CNNM3Q8NE01 707 aa12.76□□□□□ -0.37
SPIDR-212ENST00000519661 RAD54LQ92698 747 aa12.76□□□□□ -0.37
SPIDR-212ENST00000519661 SYMPKQ92797 1274 aaKnown RBP12.76□□□□□ -0.37
SPIDR-212ENST00000519661 EPSTI1Q96J88 318 aa12.76□□□□□ -0.37
SPIDR-212ENST00000519661 PLVAPQ9BX97 442 aa12.76□□□□□ -0.37
SPIDR-212ENST00000519661 CUEDC2Q9H467 287 aa12.76□□□□□ -0.37
SPIDR-212ENST00000519661 TMEM134Q9H6X4 195 aa12.76□□□□□ -0.37
SPIDR-212ENST00000519661 PRMT7Q9NVM4 692 aaPredicted RBP12.76□□□□□ -0.37
SPIDR-212ENST00000519661 RWDD3Q9Y3V2 267 aa12.76□□□□□ -0.37
SPIDR-212ENST00000519661 RBM19Q9Y4C8 960 aaKnown RBP12.76□□□□□ -0.37
SPIDR-212ENST00000519661 ATP6V1DQ9Y5K8 247 aa12.76□□□□□ -0.37
SPIDR-212ENST00000519661 COL6A3P12111 3177 aa12.75□□□□□ -0.37
SPIDR-212ENST00000519661 A0A087WWV3 80 aa12.75□□□□□ -0.37
SPIDR-212ENST00000519661 FRMD3A2A2Y4 597 aa12.75□□□□□ -0.37
SPIDR-212ENST00000519661 ACKR2O00590 384 aa12.75□□□□□ -0.37
SPIDR-212ENST00000519661 LPXNO60711 386 aa12.75□□□□□ -0.37
SPIDR-212ENST00000519661 RB1P06400 928 aa12.75□□□□□ -0.37
SPIDR-212ENST00000519661 SRGAP2CP0DJJ0 459 aa12.75□□□□□ -0.37
SPIDR-212ENST00000519661 NPTX2P47972 431 aa12.75□□□□□ -0.37
SPIDR-212ENST00000519661 KARSQ15046 597 aaKnown RBP12.75□□□□□ -0.37
SPIDR-212ENST00000519661 CCDC73Q6ZRK6 1079 aa12.75□□□□□ -0.37
SPIDR-212ENST00000519661 Q7L0L9 218 aa12.75□□□□□ -0.37
SPIDR-212ENST00000519661 CATSPER4Q7RTX7 472 aa12.75□□□□□ -0.37
SPIDR-212ENST00000519661 TMCO2Q7Z6W1 182 aaPredicted RBP12.75□□□□□ -0.37
SPIDR-212ENST00000519661 LARP4BQ92615 738 aaKnown RBP12.75□□□□□ -0.37
SPIDR-212ENST00000519661 P2RX5Q93086 422 aa12.75□□□□□ -0.37
SPIDR-212ENST00000519661 CDK5RAP3Q96JB5 506 aa12.75□□□□□ -0.37
SPIDR-212ENST00000519661 SCLT1Q96NL6 688 aa12.75□□□□□ -0.37
SPIDR-212ENST00000519661 CLIC6Q96NY7 704 aa12.75□□□□□ -0.37
SPIDR-212ENST00000519661 TGS1Q96RS0 853 aaKnown RBP12.75□□□□□ -0.37
SPIDR-212ENST00000519661 YME1L1Q96TA2 773 aa12.75□□□□□ -0.37
SPIDR-212ENST00000519661 CDX2Q99626 313 aaPredicted RBP12.75□□□□□ -0.37
SPIDR-212ENST00000519661 ZBED2Q9BTP6 218 aa12.75□□□□□ -0.37
SPIDR-212ENST00000519661 TMEM117Q9H0C3 514 aa12.75□□□□□ -0.37
SPIDR-212ENST00000519661 ST6GALNAC4Q9H4F1 302 aa12.75□□□□□ -0.37
SPIDR-212ENST00000519661 FAM105AQ9NUU6 356 aa12.75□□□□□ -0.37
SPIDR-212ENST00000519661 CIZ1Q9ULV3 898 aaPredicted RBP12.75□□□□□ -0.37
SPIDR-212ENST00000519661 CARNS1A5YM72 827 aa12.74□□□□□ -0.37
SPIDR-212ENST00000519661 HIP1RO75146 1068 aa12.74□□□□□ -0.37
SPIDR-212ENST00000519661 CSDE1O75534 798 aaKnown RBP12.74□□□□□ -0.37
SPIDR-212ENST00000519661 PLS3P13797 630 aa12.74□□□□□ -0.37
SPIDR-212ENST00000519661 ARF4P18085 180 aaPredicted RBP12.74□□□□□ -0.37
SPIDR-212ENST00000519661 NCLP19338 710 aaKnown RBP12.74□□□□□ -0.37
SPIDR-212ENST00000519661 ABCD1P33897 745 aa12.74□□□□□ -0.37
SPIDR-212ENST00000519661 TXLNAP40222 546 aa12.74□□□□□ -0.37
SPIDR-212ENST00000519661 NUCB2P80303 420 aa12.74□□□□□ -0.37
SPIDR-212ENST00000519661 DNM1Q05193 864 aaKnown RBP12.74□□□□□ -0.37
SPIDR-212ENST00000519661 STK38Q15208 465 aa12.74□□□□□ -0.37
SPIDR-212ENST00000519661 FAM102BQ5T8I3 360 aa12.74□□□□□ -0.37
SPIDR-212ENST00000519661 NOTUMQ6P988 496 aa12.74□□□□□ -0.37
SPIDR-212ENST00000519661 SHC4Q6S5L8 630 aa12.74□□□□□ -0.37
SPIDR-212ENST00000519661 FIZ1Q96SL8 496 aa12.74□□□□□ -0.37
SPIDR-212ENST00000519661 PPP1R16BQ96T49 567 aa12.74□□□□□ -0.37
SPIDR-212ENST00000519661 CCDC39Q9UFE4 941 aa12.74□□□□□ -0.37
SPIDR-212ENST00000519661 PIN4Q9Y237 131 aaKnown RBP12.74□□□□□ -0.37
SPIDR-212ENST00000519661 PCDHB7Q9Y5E2 793 aa12.74□□□□□ -0.37
SPIDR-212ENST00000519661 A0A087X0B3 334 aa12.73□□□□□ -0.37
SPIDR-212ENST00000519661 H0YCG3 227 aa12.73□□□□□ -0.37
SPIDR-212ENST00000519661 MAPTP10636 758 aaKnown RBP12.73□□□□□ -0.37
SPIDR-212ENST00000519661 FGFR4P22455 802 aa12.73□□□□□ -0.37
SPIDR-212ENST00000519661 PROZP22891 400 aa12.73□□□□□ -0.37
SPIDR-212ENST00000519661 NCKAP1LP55160 1127 aa12.73□□□□□ -0.37
SPIDR-212ENST00000519661 DMP1Q13316 513 aaPredicted RBP12.73□□□□□ -0.37
SPIDR-212ENST00000519661 MAPK6Q16659 721 aa12.73□□□□□ -0.37
SPIDR-212ENST00000519661 CLLU1OSQ5K130 101 aa12.73□□□□□ -0.37
SPIDR-212ENST00000519661 RESP18Q5W5W9 173 aa12.73□□□□□ -0.37
SPIDR-212ENST00000519661 TAS1R3Q7RTX0 852 aa12.73□□□□□ -0.37
SPIDR-212ENST00000519661 ZBTB8OSQ8IWT0 167 aa12.73□□□□□ -0.37
SPIDR-212ENST00000519661 SLC17A8Q8NDX2 589 aa12.73□□□□□ -0.37
SPIDR-212ENST00000519661 TMEM161BQ8NDZ6 487 aa12.73□□□□□ -0.37
SPIDR-212ENST00000519661 ZNF668Q96K58 619 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms