RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 DYDC2Q96IM9 177 aa13.92□□□□□ -0.18
CSMD1-205ENST00000519623 NLRP4Q96MN2 994 aa13.92□□□□□ -0.18
CSMD1-205ENST00000519623 LXNQ9BS40 222 aa13.92□□□□□ -0.18
CSMD1-205ENST00000519623 MINDY3Q9H8M7 445 aa13.92□□□□□ -0.18
CSMD1-205ENST00000519623 ENTPD7Q9NQZ7 604 aa13.92□□□□□ -0.18
CSMD1-205ENST00000519623 FAM105AQ9NUU6 356 aa13.92□□□□□ -0.18
CSMD1-205ENST00000519623 MUTYHQ9UIF7 546 aa13.92□□□□□ -0.18
CSMD1-205ENST00000519623 PIN4Q9Y237 131 aaKnown RBP13.92□□□□□ -0.18
CSMD1-205ENST00000519623 HCN4Q9Y3Q4 1203 aa13.92□□□□□ -0.18
CSMD1-205ENST00000519623 COL4A3BPQ9Y5P4 624 aa13.92□□□□□ -0.18
CSMD1-205ENST00000519623 MUC6Q6W4X9 2439 aa13.91□□□□□ -0.18
CSMD1-205ENST00000519623 FSD2A1L4K1 749 aa13.91□□□□□ -0.18
CSMD1-205ENST00000519623 BTBD18B2RXH4 712 aa13.91□□□□□ -0.18
CSMD1-205ENST00000519623 NT5C1B-RDH14C9J2C7 533 aa13.91□□□□□ -0.18
CSMD1-205ENST00000519623 MARCH6O60337 910 aa13.91□□□□□ -0.18
CSMD1-205ENST00000519623 OFD1O75665 1012 aa13.91□□□□□ -0.18
CSMD1-205ENST00000519623 BAG4O95429 457 aaKnown RBP13.91□□□□□ -0.18
CSMD1-205ENST00000519623 SEC24BO95487 1268 aa13.91□□□□□ -0.18
CSMD1-205ENST00000519623 SRGAP2CP0DJJ0 459 aa13.91□□□□□ -0.18
CSMD1-205ENST00000519623 SKIP12755 728 aa13.91□□□□□ -0.18
CSMD1-205ENST00000519623 HOXA11P31270 313 aaPredicted RBP13.91□□□□□ -0.18
CSMD1-205ENST00000519623 RFC5P40937 340 aa13.91□□□□□ -0.18
CSMD1-205ENST00000519623 ALDH7A1P49419 539 aaKnown RBP13.91□□□□□ -0.18
CSMD1-205ENST00000519623 NEK4P51957 841 aa13.91□□□□□ -0.18
CSMD1-205ENST00000519623 POLGP54098 1239 aaPredicted RBP13.91□□□□□ -0.18
CSMD1-205ENST00000519623 LAMTOR4Q0VGL1 99 aa13.91□□□□□ -0.18
CSMD1-205ENST00000519623 CTTNQ14247 550 aaKnown RBP13.91□□□□□ -0.18
CSMD1-205ENST00000519623 CBX2Q14781 532 aaPredicted RBP13.91□□□□□ -0.18
CSMD1-205ENST00000519623 NCAPH2Q6IBW4 605 aa13.91□□□□□ -0.18
CSMD1-205ENST00000519623 ANKRD54Q6NXT1 300 aa13.91□□□□□ -0.18
CSMD1-205ENST00000519623 SYCE2Q6PIF2 218 aa13.91□□□□□ -0.18
CSMD1-205ENST00000519623 OTUD6AQ7L8S5 288 aa13.91□□□□□ -0.18
CSMD1-205ENST00000519623 MRPL10Q7Z7H8 261 aaKnown RBP13.91□□□□□ -0.18
CSMD1-205ENST00000519623 HSD17B14Q9BPX1 270 aa13.91□□□□□ -0.18
CSMD1-205ENST00000519623 PHF7Q9BWX1 381 aaPredicted RBP13.91□□□□□ -0.18
CSMD1-205ENST00000519623 MRPL9Q9BYD2 267 aaKnown RBP13.91□□□□□ -0.18
CSMD1-205ENST00000519623 ZSWIM4Q9H7M6 989 aa13.91□□□□□ -0.18
CSMD1-205ENST00000519623 TECTAO75443 2155 aa13.9□□□□□ -0.18
CSMD1-205ENST00000519623 C2orf71A6NGG8 1288 aa13.9□□□□□ -0.18
CSMD1-205ENST00000519623 WNT7AO00755 349 aa13.9□□□□□ -0.18
CSMD1-205ENST00000519623 ASAP2O43150 1006 aa13.9□□□□□ -0.18
CSMD1-205ENST00000519623 JAK2O60674 1132 aa13.9□□□□□ -0.18
CSMD1-205ENST00000519623 TECP42680 631 aa13.9□□□□□ -0.18
CSMD1-205ENST00000519623 CYP4A11Q02928 519 aa13.9□□□□□ -0.18
CSMD1-205ENST00000519623 NOMO2Q5JPE7 1267 aa13.9□□□□□ -0.18
CSMD1-205ENST00000519623 UBXN11Q5T124 520 aa13.9□□□□□ -0.18
CSMD1-205ENST00000519623 SRGAP1Q7Z6B7 1085 aa13.9□□□□□ -0.18
CSMD1-205ENST00000519623 FERMT3Q86UX7 667 aa13.9□□□□□ -0.18
CSMD1-205ENST00000519623 TMEM173Q86WV6 379 aaPredicted RBP13.9□□□□□ -0.18
CSMD1-205ENST00000519623 TPH2Q8IWU9 490 aa13.9□□□□□ -0.18
CSMD1-205ENST00000519623 PSPC1Q8WXF1 523 aaKnown RBP13.9□□□□□ -0.18
CSMD1-205ENST00000519623 RSPH1Q8WYR4 309 aa13.9□□□□□ -0.18
CSMD1-205ENST00000519623 NRDE2Q9H7Z3 1164 aa13.9□□□□□ -0.18
CSMD1-205ENST00000519623 AGPAT5Q9NUQ2 364 aa13.9□□□□□ -0.18
CSMD1-205ENST00000519623 TBC1D13Q9NVG8 400 aa13.9□□□□□ -0.18
CSMD1-205ENST00000519623 PCDHA12Q9UN75 941 aa13.9□□□□□ -0.18
CSMD1-205ENST00000519623 PCDHB2Q9Y5E7 798 aa13.9□□□□□ -0.18
CSMD1-205ENST00000519623 LYPLA2O95372 231 aa13.89□□□□□ -0.19
CSMD1-205ENST00000519623 CXCL14O95715 111 aa13.89□□□□□ -0.19
CSMD1-205ENST00000519623 GALTP07902 379 aa13.89□□□□□ -0.19
CSMD1-205ENST00000519623 RAB27AP51159 221 aa13.89□□□□□ -0.19
CSMD1-205ENST00000519623 ST3GAL1Q11201 340 aa13.89□□□□□ -0.19
CSMD1-205ENST00000519623 SMC1AQ14683 1233 aaKnown RBP13.89□□□□□ -0.19
CSMD1-205ENST00000519623 EMC2Q15006 297 aa13.89□□□□□ -0.19
CSMD1-205ENST00000519623 XKR9Q5GH70 373 aa13.89□□□□□ -0.19
CSMD1-205ENST00000519623 LLGL2Q6P1M3 1020 aa13.89□□□□□ -0.19
CSMD1-205ENST00000519623 GLB1LQ6UWU2 654 aa13.89□□□□□ -0.19
CSMD1-205ENST00000519623 AGMOQ6ZNB7 445 aa13.89□□□□□ -0.19
CSMD1-205ENST00000519623 TCP11Q8WWU5 503 aa13.89□□□□□ -0.19
CSMD1-205ENST00000519623 EDAQ92838 391 aa13.89□□□□□ -0.19
CSMD1-205ENST00000519623 MTMR9Q96QG7 549 aa13.89□□□□□ -0.19
CSMD1-205ENST00000519623 EIF2AK1Q9BQI3 630 aaKnown RBP13.89□□□□□ -0.19
CSMD1-205ENST00000519623 BRMS1Q9HCU9 246 aa13.89□□□□□ -0.19
CSMD1-205ENST00000519623 XPNPEP1Q9NQW7 623 aa13.89□□□□□ -0.19
CSMD1-205ENST00000519623 BMP2KQ9NSY1 1161 aaPredicted RBP13.89□□□□□ -0.19
CSMD1-205ENST00000519623 GAS2O43903 313 aaKnown RBP13.88□□□□□ -0.19
CSMD1-205ENST00000519623 B4GALT3O60512 393 aa13.88□□□□□ -0.19
CSMD1-205ENST00000519623 CLASP2O75122 1294 aaKnown RBP13.88□□□□□ -0.19
CSMD1-205ENST00000519623 ZC3H11AO75152 810 aaKnown RBP eCLIP13.88□□□□□ -0.19
CSMD1-205ENST00000519623 HOXB8P17481 243 aaPredicted RBP13.88□□□□□ -0.19
CSMD1-205ENST00000519623 AFF1P51825 1210 aaKnown RBP13.88□□□□□ -0.19
CSMD1-205ENST00000519623 CALCRLQ16602 461 aa13.88□□□□□ -0.19
CSMD1-205ENST00000519623 HFE2Q6ZVN8 426 aa13.88□□□□□ -0.19
CSMD1-205ENST00000519623 DDX53Q86TM3 631 aaKnown RBP13.88□□□□□ -0.19
CSMD1-205ENST00000519623 ZNF280BQ86YH2 543 aa13.88□□□□□ -0.19
CSMD1-205ENST00000519623 DIS3L2Q8IYB7 885 aaKnown RBP13.88□□□□□ -0.19
CSMD1-205ENST00000519623 VPS52Q8N1B4 723 aa13.88□□□□□ -0.19
CSMD1-205ENST00000519623 RNF149Q8NC42 400 aa13.88□□□□□ -0.19
CSMD1-205ENST00000519623 BCL7CQ8WUZ0 217 aaPredicted RBP13.88□□□□□ -0.19
CSMD1-205ENST00000519623 PGBD4Q96DM1 585 aa13.88□□□□□ -0.19
CSMD1-205ENST00000519623 TMEM169Q96HH4 297 aa13.88□□□□□ -0.19
CSMD1-205ENST00000519623 IGSF21Q96ID5 467 aa13.88□□□□□ -0.19
CSMD1-205ENST00000519623 RPGRIP1Q96KN7 1286 aa13.88□□□□□ -0.19
CSMD1-205ENST00000519623 APOL5Q9BWW9 433 aa13.88□□□□□ -0.19
CSMD1-205ENST00000519623 TTC12Q9H892 705 aaPredicted RBP13.88□□□□□ -0.19
CSMD1-205ENST00000519623 DNAJB4Q9UDY4 337 aa13.88□□□□□ -0.19
CSMD1-205ENST00000519623 INPP5FQ9Y2H2 1132 aa13.88□□□□□ -0.19
CSMD1-205ENST00000519623 ARID2Q68CP9 1835 aa13.87□□□□□ -0.19
CSMD1-205ENST00000519623 ZNF318Q5VUA4 2279 aa13.87□□□□□ -0.19
CSMD1-205ENST00000519623 CARNS1A5YM72 827 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms