RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 FKBP15Q5T1M5 1219 aa8.75□□□□□ -1.01
CLK4-203ENST00000519583 ZNF746Q6NUN9 644 aaPredicted RBP8.75□□□□□ -1.01
CLK4-203ENST00000519583 NFRKBQ6P4R8 1299 aa8.75□□□□□ -1.01
CLK4-203ENST00000519583 ANKRD33Q7Z3H0 272 aa8.75□□□□□ -1.01
CLK4-203ENST00000519583 TOX2Q96NM4 488 aa8.75□□□□□ -1.01
CLK4-203ENST00000519583 NDST4Q9H3R1 872 aa8.75□□□□□ -1.01
CLK4-203ENST00000519583 MRPL44Q9H9J2 332 aaKnown RBP8.75□□□□□ -1.01
CLK4-203ENST00000519583 TRMT13Q9NUP7 481 aaKnown RBP8.75□□□□□ -1.01
CLK4-203ENST00000519583 HDAC6Q9UBN7 1215 aa8.75□□□□□ -1.01
CLK4-203ENST00000519583 COL4A3BPQ9Y5P4 624 aa8.75□□□□□ -1.01
CLK4-203ENST00000519583 H0YGN5 161 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 HAS3O00219 553 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 ZSCAN12O43309 604 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 B4GALT4O60513 344 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 CLTBP09497 229 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 FECHP22830 423 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 CCDC40Q4G0X9 1142 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 MIS18BP1Q6P0N0 1132 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 EPM2AIP1Q7L775 607 aaPredicted RBP8.74□□□□□ -1.01
CLK4-203ENST00000519583 FAM126BQ8IXS8 530 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 NEK9Q8TD19 979 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 SEZ6LQ9BYH1 1024 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 SMARCAD1Q9H4L7 1026 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 TMEM39AQ9NV64 488 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 NOD1Q9Y239 953 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 ARHGEF35A5YM69 484 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 WDR64B1ANS9 1081 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 KIF2AO00139 706 aaPredicted RBP8.74□□□□□ -1.01
CLK4-203ENST00000519583 GCNT3O95395 438 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 SUPT20HL2P0C7V6 817 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 TRIM21P19474 475 aaKnown RBP8.74□□□□□ -1.01
CLK4-203ENST00000519583 HOXD13P35453 343 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 FAAP100Q0VG06 881 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 ABHD15Q6UXT9 468 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 SYT10Q6XYQ8 523 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 CEP63Q96MT8 703 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 PCYT2Q99447 389 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 PDLIM7Q9NR12 457 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 ERAP1Q9NZ08 941 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 LUC7L2Q9Y383 392 aaKnown RBP8.74□□□□□ -1.01
CLK4-203ENST00000519583 PAXBP1Q9Y5B6 917 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 LGR5O75473 907 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 P4HBP07237 508 aaKnown RBP8.74□□□□□ -1.01
CLK4-203ENST00000519583 GAP43P17677 238 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 STAT5BP51692 787 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 KNOP1Q1ED39 458 aaKnown RBP8.74□□□□□ -1.01
CLK4-203ENST00000519583 FAM160B1Q5W0V3 765 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 SWSAP1Q6NVH7 229 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 CCDC60Q8IWA6 550 aaPredicted RBP8.74□□□□□ -1.01
CLK4-203ENST00000519583 SMAP1Q8IYB5 467 aaPredicted RBP8.74□□□□□ -1.01
CLK4-203ENST00000519583 MYCT1Q8N699 235 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 ERGIC2Q96RQ1 377 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 TTYH3Q9C0H2 523 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 RNPEPQ9H4A4 650 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 ZSWIM4Q9H7M6 989 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 ZNF302Q9NR11 478 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 AGPAT5Q9NUQ2 364 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 CAPN11Q9UMQ6 739 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 PCDHA10Q9Y5I2 948 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 DNAH12Q6ZR08 3092 aa8.74□□□□□ -1.01
CLK4-203ENST00000519583 EMSYQ7Z589 1322 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 ATG7O95352 703 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 PSAPP07602 524 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 NMT1P30419 496 aaKnown RBP8.73□□□□□ -1.01
CLK4-203ENST00000519583 PTPN11Q06124 597 aaPredicted RBP8.73□□□□□ -1.01
CLK4-203ENST00000519583 GDF6Q6KF10 455 aaPredicted RBP8.73□□□□□ -1.01
CLK4-203ENST00000519583 TRMT1LQ7Z2T5 733 aaKnown RBP8.73□□□□□ -1.01
CLK4-203ENST00000519583 TMTC1Q8IUR5 882 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 OR8K1Q8NGG5 319 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 KIF18AQ8NI77 898 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 GTF2IRD1Q9UHL9 959 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 ADGRG1Q9Y653 693 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 CD4P01730 458 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 CCDC175P0C221 793 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 SMIM10L2AP0DMW4 78 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 SMIM10L2BP0DMW5 78 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 CYP2C9P11712 490 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 NR2F2P24468 414 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 JAK3P52333 1124 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 KCNA1Q09470 495 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 ADAM9Q13443 819 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 PTGISQ16647 500 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 UGCGQ16739 394 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 BMT2Q1RMZ1 405 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 EDRF1Q3B7T1 1238 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 CYP26C1Q6V0L0 522 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 PPP4R3CPQ6ZMV5 832 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 ZC3H3Q8IXZ2 948 aaKnown RBP8.73□□□□□ -1.01
CLK4-203ENST00000519583 TSC1Q92574 1164 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 NUP58Q9BVL2 599 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 PARVGQ9HBI0 331 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 OLFML3Q9NRN5 406 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 GABBR1Q9UBS5 961 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 TRPC6Q9Y210 931 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 SIK3Q9Y2K2 1263 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 A0A0U1RQJ8 604 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 TRIM43BA6NCK2 446 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 RAG1P15918 1043 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 SFNP31947 248 aa8.73□□□□□ -1.01
CLK4-203ENST00000519583 QARSP47897 775 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms