RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 PTCH2Q9Y6C5 1203 aa4.5□□□□□ -1.69
CSMD3-209ENST00000519485 RAB3GAP2Q9H2M9 1393 aa4.5□□□□□ -1.69
CSMD3-209ENST00000519485 FHAD1B1AJZ9 1412 aa4.49□□□□□ -1.69
CSMD3-209ENST00000519485 MFAP3LO75121 409 aa4.49□□□□□ -1.69
CSMD3-209ENST00000519485 ABHD16AO95870 558 aa4.49□□□□□ -1.69
CSMD3-209ENST00000519485 CD38P28907 300 aa4.49□□□□□ -1.69
CSMD3-209ENST00000519485 FNTBP49356 437 aa4.49□□□□□ -1.69
CSMD3-209ENST00000519485 CLEC14AQ86T13 490 aa4.49□□□□□ -1.69
CSMD3-209ENST00000519485 LILRB2Q8N423 598 aa4.49□□□□□ -1.69
CSMD3-209ENST00000519485 OR5AN1Q8NGI8 311 aa4.49□□□□□ -1.69
CSMD3-209ENST00000519485 ATXN2LQ8WWM7 1075 aaKnown RBP4.49□□□□□ -1.69
CSMD3-209ENST00000519485 RPL10LQ96L21 214 aaKnown RBP4.49□□□□□ -1.69
CSMD3-209ENST00000519485 HAPLN2Q9GZV7 340 aa4.49□□□□□ -1.69
CSMD3-209ENST00000519485 SYNPO2LQ9H987 977 aa4.49□□□□□ -1.69
CSMD3-209ENST00000519485 ADARB2Q9NS39 739 aaKnown RBP4.49□□□□□ -1.69
CSMD3-209ENST00000519485 RBM8AQ9Y5S9 174 aaKnown RBP4.49□□□□□ -1.69
CSMD3-209ENST00000519485 COX11Q9Y6N1 276 aa4.49□□□□□ -1.69
CSMD3-209ENST00000519485 PEG3Q9GZU2 1588 aa4.48□□□□□ -1.69
CSMD3-209ENST00000519485 RUSC2Q8N2Y8 1516 aa4.48□□□□□ -1.69
CSMD3-209ENST00000519485 TRIM24O15164 1050 aa4.48□□□□□ -1.69
CSMD3-209ENST00000519485 RASGRP1O95267 797 aa4.48□□□□□ -1.69
CSMD3-209ENST00000519485 NPTXRO95502 500 aa4.48□□□□□ -1.69
CSMD3-209ENST00000519485 JUNP05412 331 aaKnown RBP4.48□□□□□ -1.69
CSMD3-209ENST00000519485 ACAP1Q15027 740 aa4.48□□□□□ -1.69
CSMD3-209ENST00000519485 DGKDQ16760 1214 aa4.48□□□□□ -1.69
CSMD3-209ENST00000519485 PLEKHG4Q58EX7 1191 aa4.48□□□□□ -1.69
CSMD3-209ENST00000519485 CC2D1AQ6P1N0 951 aaPredicted RBP4.48□□□□□ -1.69
CSMD3-209ENST00000519485 KCNV1Q6PIU1 500 aa4.48□□□□□ -1.69
CSMD3-209ENST00000519485 OLFML1Q6UWY5 402 aa4.48□□□□□ -1.69
CSMD3-209ENST00000519485 OVCH1Q7RTY7 1134 aa4.48□□□□□ -1.69
CSMD3-209ENST00000519485 CISD2Q8N5K1 135 aaKnown RBP4.48□□□□□ -1.69
CSMD3-209ENST00000519485 GSTCDQ8NEC7 633 aa4.48□□□□□ -1.69
CSMD3-209ENST00000519485 E2F7Q96AV8 911 aa4.48□□□□□ -1.69
CSMD3-209ENST00000519485 COQ6Q9Y2Z9 468 aa4.48□□□□□ -1.69
CSMD3-209ENST00000519485 WASHC2AQ641Q2 1341 aa4.47□□□□□ -1.69
CSMD3-209ENST00000519485 TOP2BQ02880 1626 aa4.47□□□□□ -1.69
CSMD3-209ENST00000519485 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.47□□□□□ -1.69
CSMD3-209ENST00000519485 SLC12A8A0AV02 714 aa4.47□□□□□ -1.69
CSMD3-209ENST00000519485 PRLP01236 227 aa4.47□□□□□ -1.69
CSMD3-209ENST00000519485 ANTXR2P58335 489 aa4.47□□□□□ -1.69
CSMD3-209ENST00000519485 CCDC144BQ3MJ40 725 aa4.47□□□□□ -1.69
CSMD3-209ENST00000519485 METTL24Q5JXM2 366 aa4.47□□□□□ -1.69
CSMD3-209ENST00000519485 HECTD2Q5U5R9 776 aa4.47□□□□□ -1.69
CSMD3-209ENST00000519485 OTOP1Q7RTM1 612 aa4.47□□□□□ -1.69
CSMD3-209ENST00000519485 BRAPQ7Z569 592 aa4.47□□□□□ -1.69
CSMD3-209ENST00000519485 ELOA2Q8IYF1 753 aaPredicted RBP4.47□□□□□ -1.69
CSMD3-209ENST00000519485 PLA2G15Q8NCC3 412 aa4.47□□□□□ -1.69
CSMD3-209ENST00000519485 SLC7A14Q8TBB6 771 aa4.47□□□□□ -1.69
CSMD3-209ENST00000519485 C16orf92Q96LL3 132 aa4.47□□□□□ -1.69
CSMD3-209ENST00000519485 ZNF512Q96ME7 567 aaPredicted RBP4.47□□□□□ -1.69
CSMD3-209ENST00000519485 MRPL4Q9BYD3 311 aaKnown RBP4.47□□□□□ -1.69
CSMD3-209ENST00000519485 KCMF1Q9P0J7 381 aa4.47□□□□□ -1.69
CSMD3-209ENST00000519485 PRXQ9BXM0 1461 aa4.47□□□□□ -1.69
CSMD3-209ENST00000519485 RAPGEF2Q9Y4G8 1499 aa4.47□□□□□ -1.69
CSMD3-209ENST00000519485 ARID4BQ4LE39 1312 aaPredicted RBP4.46□□□□□ -1.69
CSMD3-209ENST00000519485 WASHC2CQ9Y4E1 1318 aa4.46□□□□□ -1.69
CSMD3-209ENST00000519485 KIF27Q86VH2 1401 aa4.46□□□□□ -1.69
CSMD3-209ENST00000519485 WDR97A6NE52 1622 aa4.46□□□□□ -1.69
CSMD3-209ENST00000519485 GOLGA8BA8MQT2 603 aa4.46□□□□□ -1.7
CSMD3-209ENST00000519485 KRTAP29-1A8MX34 341 aaPredicted RBP4.46□□□□□ -1.7
CSMD3-209ENST00000519485 MTSS1O43312 755 aa4.46□□□□□ -1.7
CSMD3-209ENST00000519485 HIP1RO75146 1068 aa4.46□□□□□ -1.7
CSMD3-209ENST00000519485 TOX4O94842 621 aa4.46□□□□□ -1.7
CSMD3-209ENST00000519485 SPIDRQ14159 915 aa4.46□□□□□ -1.7
CSMD3-209ENST00000519485 TRIM61Q5EBN2 209 aa4.46□□□□□ -1.7
CSMD3-209ENST00000519485 STRIP1Q5VSL9 837 aa4.46□□□□□ -1.7
CSMD3-209ENST00000519485 APBB1IPQ7Z5R6 666 aaPredicted RBP4.46□□□□□ -1.7
CSMD3-209ENST00000519485 BMP8AQ7Z5Y6 402 aa4.46□□□□□ -1.7
CSMD3-209ENST00000519485 FAM43AQ8N2R8 423 aa4.46□□□□□ -1.7
CSMD3-209ENST00000519485 JMYQ8N9B5 988 aa4.46□□□□□ -1.7
CSMD3-209ENST00000519485 ST8SIA2Q92186 375 aa4.46□□□□□ -1.7
CSMD3-209ENST00000519485 NCOA5Q9HCD5 579 aaKnown RBP4.46□□□□□ -1.7
CSMD3-209ENST00000519485 RCAN3Q9UKA8 241 aa4.46□□□□□ -1.7
CSMD3-209ENST00000519485 MAPKBP1O60336 1514 aa4.46□□□□□ -1.7
CSMD3-209ENST00000519485 SMG6Q86US8 1419 aaKnown RBP4.46□□□□□ -1.7
CSMD3-209ENST00000519485 ARAP1Q96P48 1450 aa4.45□□□□□ -1.7
CSMD3-209ENST00000519485 KTN1Q86UP2 1357 aaKnown RBP4.45□□□□□ -1.7
CSMD3-209ENST00000519485 PLD2O14939 933 aa4.45□□□□□ -1.7
CSMD3-209ENST00000519485 RAPGEF3O95398 923 aa4.45□□□□□ -1.7
CSMD3-209ENST00000519485 ZBTB48P10074 688 aaPredicted RBP4.45□□□□□ -1.7
CSMD3-209ENST00000519485 ZFP36P26651 326 aaKnown RBP4.45□□□□□ -1.7
CSMD3-209ENST00000519485 ROM1Q03395 351 aa4.45□□□□□ -1.7
CSMD3-209ENST00000519485 TMEM132BQ14DG7 1078 aa4.45□□□□□ -1.7
CSMD3-209ENST00000519485 L1TD1Q5T7N2 865 aaKnown RBP4.45□□□□□ -1.7
CSMD3-209ENST00000519485 FGD2Q7Z6J4 655 aa4.45□□□□□ -1.7
CSMD3-209ENST00000519485 GLCCI1Q86VQ1 547 aa4.45□□□□□ -1.7
CSMD3-209ENST00000519485 CMTM4Q8IZR5 234 aa4.45□□□□□ -1.7
CSMD3-209ENST00000519485 C2orf69Q8N8R5 385 aa4.45□□□□□ -1.7
CSMD3-209ENST00000519485 IGSF22Q8N9C0 903 aa4.45□□□□□ -1.7
CSMD3-209ENST00000519485 SH3TC2Q8TF17 1288 aa4.45□□□□□ -1.7
CSMD3-209ENST00000519485 MYEOVQ96EZ4 313 aa4.45□□□□□ -1.7
CSMD3-209ENST00000519485 WDR92Q96MX6 357 aa4.45□□□□□ -1.7
CSMD3-209ENST00000519485 PDCD2LQ9BRP1 358 aa4.45□□□□□ -1.7
CSMD3-209ENST00000519485 BIVM-ERCC5R4GMW8 1640 aa4.45□□□□□ -1.7
CSMD3-209ENST00000519485 TIAM1Q13009 1591 aa4.44□□□□□ -1.7
CSMD3-209ENST00000519485 CCDC18Q5T9S5 1454 aa4.44□□□□□ -1.7
CSMD3-209ENST00000519485 TCRBV16S1A1N1A0A5B0 115 aa4.44□□□□□ -1.7
CSMD3-209ENST00000519485 KCNQ2O43526 872 aa4.44□□□□□ -1.7
CSMD3-209ENST00000519485 OPA1O60313 960 aa4.44□□□□□ -1.7
CSMD3-209ENST00000519485 KRT37O76014 449 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms