RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 ATF7P17544 494 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC9-206ENST00000519482 PHKA2P46019 1235 aa13.91□□□□□ -0.18
TRAPPC9-206ENST00000519482 RAB27AP51159 221 aa13.91□□□□□ -0.18
TRAPPC9-206ENST00000519482 POLGP54098 1239 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC9-206ENST00000519482 KRT17Q04695 432 aa13.91□□□□□ -0.18
TRAPPC9-206ENST00000519482 NR5A1Q13285 461 aa13.91□□□□□ -0.18
TRAPPC9-206ENST00000519482 GSE1Q14687 1217 aa13.91□□□□□ -0.18
TRAPPC9-206ENST00000519482 ME3Q16798 604 aa13.91□□□□□ -0.18
TRAPPC9-206ENST00000519482 EARS2Q5JPH6 523 aaKnown RBP13.91□□□□□ -0.18
TRAPPC9-206ENST00000519482 OTUD6AQ7L8S5 288 aa13.91□□□□□ -0.18
TRAPPC9-206ENST00000519482 NECAB1Q8N987 351 aa13.91□□□□□ -0.18
TRAPPC9-206ENST00000519482 HELQQ8TDG4 1101 aa13.91□□□□□ -0.18
TRAPPC9-206ENST00000519482 TNFRSF25Q93038 417 aa13.91□□□□□ -0.18
TRAPPC9-206ENST00000519482 CEP170P1Q96L14 293 aa13.91□□□□□ -0.18
TRAPPC9-206ENST00000519482 LXNQ9BS40 222 aa13.91□□□□□ -0.18
TRAPPC9-206ENST00000519482 DHX33Q9H6R0 707 aaKnown RBP13.91□□□□□ -0.18
TRAPPC9-206ENST00000519482 SPG21Q9NZD8 308 aa13.91□□□□□ -0.18
TRAPPC9-206ENST00000519482 WRAP73Q9P2S5 460 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC9-206ENST00000519482 HCN4Q9Y3Q4 1203 aa13.91□□□□□ -0.18
TRAPPC9-206ENST00000519482 COL4A3BPQ9Y5P4 624 aa13.91□□□□□ -0.18
TRAPPC9-206ENST00000519482 ASAP2O43150 1006 aa13.9□□□□□ -0.18
TRAPPC9-206ENST00000519482 DTNBO60941 627 aa13.9□□□□□ -0.18
TRAPPC9-206ENST00000519482 ZNF623O75123 536 aa13.9□□□□□ -0.18
TRAPPC9-206ENST00000519482 LARGE1O95461 756 aa13.9□□□□□ -0.18
TRAPPC9-206ENST00000519482 SRGAP2BP0DMP2 458 aa13.9□□□□□ -0.18
TRAPPC9-206ENST00000519482 YWHABP31946 246 aaKnown RBP13.9□□□□□ -0.18
TRAPPC9-206ENST00000519482 NPEPPSP55786 919 aa13.9□□□□□ -0.18
TRAPPC9-206ENST00000519482 SPIRE1Q08AE8 756 aa13.9□□□□□ -0.18
TRAPPC9-206ENST00000519482 TWF2Q6IBS0 349 aaKnown RBP13.9□□□□□ -0.18
TRAPPC9-206ENST00000519482 NCAPH2Q6IBW4 605 aa13.9□□□□□ -0.18
TRAPPC9-206ENST00000519482 TMEM184AQ6ZMB5 413 aa13.9□□□□□ -0.18
TRAPPC9-206ENST00000519482 CATSPER4Q7RTX7 472 aa13.9□□□□□ -0.18
TRAPPC9-206ENST00000519482 KSR1Q8IVT5 923 aa13.9□□□□□ -0.18
TRAPPC9-206ENST00000519482 NSUN7Q8NE18 718 aaKnown RBP13.9□□□□□ -0.18
TRAPPC9-206ENST00000519482 TCP11Q8WWU5 503 aa13.9□□□□□ -0.18
TRAPPC9-206ENST00000519482 PSPC1Q8WXF1 523 aaKnown RBP13.9□□□□□ -0.18
TRAPPC9-206ENST00000519482 NLRP4Q96MN2 994 aa13.9□□□□□ -0.18
TRAPPC9-206ENST00000519482 TCF25Q9BQ70 676 aa13.9□□□□□ -0.18
TRAPPC9-206ENST00000519482 ZSWIM4Q9H7M6 989 aa13.9□□□□□ -0.18
TRAPPC9-206ENST00000519482 IFT122Q9HBG6 1241 aa13.9□□□□□ -0.18
TRAPPC9-206ENST00000519482 ENTPD7Q9NQZ7 604 aa13.9□□□□□ -0.18
TRAPPC9-206ENST00000519482 FOXD4L1Q9NU39 408 aa13.9□□□□□ -0.18
TRAPPC9-206ENST00000519482 BARX2Q9UMQ3 279 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC9-206ENST00000519482 PIN4Q9Y237 131 aaKnown RBP13.9□□□□□ -0.18
TRAPPC9-206ENST00000519482 FAM86C2PA6NEL3 165 aa13.89□□□□□ -0.19
TRAPPC9-206ENST00000519482 FAM205CA6NFA0 338 aa13.89□□□□□ -0.19
TRAPPC9-206ENST00000519482 PER2O15055 1255 aa13.89□□□□□ -0.19
TRAPPC9-206ENST00000519482 ALDH7A1P49419 539 aaKnown RBP13.89□□□□□ -0.19
TRAPPC9-206ENST00000519482 KCNC3Q14003 757 aa13.89□□□□□ -0.19
TRAPPC9-206ENST00000519482 TRIM29Q14134 588 aa13.89□□□□□ -0.19
TRAPPC9-206ENST00000519482 PLPP4Q5VZY2 271 aa13.89□□□□□ -0.19
TRAPPC9-206ENST00000519482 TMC7Q7Z402 723 aa13.89□□□□□ -0.19
TRAPPC9-206ENST00000519482 SRGAP1Q7Z6B7 1085 aa13.89□□□□□ -0.19
TRAPPC9-206ENST00000519482 SLC39A11Q8N1S5 342 aa13.89□□□□□ -0.19
TRAPPC9-206ENST00000519482 ZNF579Q8NAF0 562 aaKnown RBP13.89□□□□□ -0.19
TRAPPC9-206ENST00000519482 PRPF31Q8WWY3 499 aaKnown RBP13.89□□□□□ -0.19
TRAPPC9-206ENST00000519482 DYDC2Q96IM9 177 aa13.89□□□□□ -0.19
TRAPPC9-206ENST00000519482 AGPAT5Q9NUQ2 364 aa13.89□□□□□ -0.19
TRAPPC9-206ENST00000519482 FAM105AQ9NUU6 356 aa13.89□□□□□ -0.19
TRAPPC9-206ENST00000519482 RGL1Q9NZL6 768 aa13.89□□□□□ -0.19
TRAPPC9-206ENST00000519482 PCDHA12Q9UN75 941 aa13.89□□□□□ -0.19
TRAPPC9-206ENST00000519482 SLITRK3O94933 977 aa13.88□□□□□ -0.19
TRAPPC9-206ENST00000519482 LYPLA2O95372 231 aa13.88□□□□□ -0.19
TRAPPC9-206ENST00000519482 PLA2G5P39877 138 aa13.88□□□□□ -0.19
TRAPPC9-206ENST00000519482 PBX3P40426 434 aa13.88□□□□□ -0.19
TRAPPC9-206ENST00000519482 BCAR1P56945 870 aa13.88□□□□□ -0.19
TRAPPC9-206ENST00000519482 LAMTOR4Q0VGL1 99 aa13.88□□□□□ -0.19
TRAPPC9-206ENST00000519482 CALCRLQ16602 461 aa13.88□□□□□ -0.19
TRAPPC9-206ENST00000519482 XKR9Q5GH70 373 aa13.88□□□□□ -0.19
TRAPPC9-206ENST00000519482 GLB1LQ6UWU2 654 aa13.88□□□□□ -0.19
TRAPPC9-206ENST00000519482 DIS3L2Q8IYB7 885 aaKnown RBP13.88□□□□□ -0.19
TRAPPC9-206ENST00000519482 VN1R2Q8NFZ6 395 aa13.88□□□□□ -0.19
TRAPPC9-206ENST00000519482 TMEM143Q96AN5 459 aa13.88□□□□□ -0.19
TRAPPC9-206ENST00000519482 PGBD4Q96DM1 585 aa13.88□□□□□ -0.19
TRAPPC9-206ENST00000519482 USP15Q9Y4E8 981 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC9-206ENST00000519482 HIDE1A8MVS5 230 aa13.87□□□□□ -0.19
TRAPPC9-206ENST00000519482 BTBD18B2RXH4 712 aa13.87□□□□□ -0.19
TRAPPC9-206ENST00000519482 TRAK2O60296 914 aa13.87□□□□□ -0.19
TRAPPC9-206ENST00000519482 SRGAP2CP0DJJ0 459 aa13.87□□□□□ -0.19
TRAPPC9-206ENST00000519482 DEKP35659 375 aaKnown RBP13.87□□□□□ -0.19
TRAPPC9-206ENST00000519482 CYP4A11Q02928 519 aa13.87□□□□□ -0.19
TRAPPC9-206ENST00000519482 CTTNQ14247 550 aaKnown RBP13.87□□□□□ -0.19
TRAPPC9-206ENST00000519482 SMC1AQ14683 1233 aaKnown RBP13.87□□□□□ -0.19
TRAPPC9-206ENST00000519482 BMS1Q14692 1282 aaKnown RBP13.87□□□□□ -0.19
TRAPPC9-206ENST00000519482 EMC2Q15006 297 aa13.87□□□□□ -0.19
TRAPPC9-206ENST00000519482 PCBP1Q15365 356 aaKnown RBP eCLIP13.87□□□□□ -0.19
TRAPPC9-206ENST00000519482 HERC4Q5GLZ8 1057 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC9-206ENST00000519482 NOMO2Q5JPE7 1267 aa13.87□□□□□ -0.19
TRAPPC9-206ENST00000519482 MRPL10Q7Z7H8 261 aaKnown RBP13.87□□□□□ -0.19
TRAPPC9-206ENST00000519482 FERMT3Q86UX7 667 aa13.87□□□□□ -0.19
TRAPPC9-206ENST00000519482 RNF135Q8IUD6 432 aa13.87□□□□□ -0.19
TRAPPC9-206ENST00000519482 TPH2Q8IWU9 490 aa13.87□□□□□ -0.19
TRAPPC9-206ENST00000519482 LPPQ93052 612 aa13.87□□□□□ -0.19
TRAPPC9-206ENST00000519482 FAM122AQ96E09 287 aa13.87□□□□□ -0.19
TRAPPC9-206ENST00000519482 TMEM169Q96HH4 297 aa13.87□□□□□ -0.19
TRAPPC9-206ENST00000519482 MTRQ99707 1265 aa13.87□□□□□ -0.19
TRAPPC9-206ENST00000519482 HSD17B14Q9BPX1 270 aa13.87□□□□□ -0.19
TRAPPC9-206ENST00000519482 EIF2AK1Q9BQI3 630 aaKnown RBP13.87□□□□□ -0.19
TRAPPC9-206ENST00000519482 PHF7Q9BWX1 381 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC9-206ENST00000519482 TTC12Q9H892 705 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms