RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 PSPC1Q8WXF1 523 aaKnown RBP12.17□□□□□ -0.46
PVT1-208ENST00000519481 EDAQ92838 391 aa12.17□□□□□ -0.46
PVT1-208ENST00000519481 CEP89Q96ST8 783 aa12.17□□□□□ -0.46
PVT1-208ENST00000519481 TRAIPQ9BWF2 469 aa12.17□□□□□ -0.46
PVT1-208ENST00000519481 KCNMB3Q9NPA1 279 aa12.17□□□□□ -0.46
PVT1-208ENST00000519481 ORC3Q9UBD5 711 aaPredicted RBP12.17□□□□□ -0.46
PVT1-208ENST00000519481 COL4A3BPQ9Y5P4 624 aa12.17□□□□□ -0.46
PVT1-208ENST00000519481 EML1O00423 815 aa12.16□□□□□ -0.46
PVT1-208ENST00000519481 ASAP2O43150 1006 aa12.16□□□□□ -0.46
PVT1-208ENST00000519481 ZC3H11AO75152 810 aaKnown RBP eCLIP12.16□□□□□ -0.46
PVT1-208ENST00000519481 CXCL14O95715 111 aa12.16□□□□□ -0.46
PVT1-208ENST00000519481 NPEPPSP55786 919 aa12.16□□□□□ -0.46
PVT1-208ENST00000519481 RBM10P98175 930 aaKnown RBP12.16□□□□□ -0.46
PVT1-208ENST00000519481 GIT2Q14161 759 aa12.16□□□□□ -0.46
PVT1-208ENST00000519481 CBX2Q14781 532 aaPredicted RBP12.16□□□□□ -0.46
PVT1-208ENST00000519481 NOMO2Q5JPE7 1267 aa12.16□□□□□ -0.46
PVT1-208ENST00000519481 NCAPH2Q6IBW4 605 aa12.16□□□□□ -0.46
PVT1-208ENST00000519481 SRGAP1Q7Z6B7 1085 aa12.16□□□□□ -0.46
PVT1-208ENST00000519481 C4orf19Q8IY42 314 aa12.16□□□□□ -0.46
PVT1-208ENST00000519481 MRPL43Q8N983 215 aaKnown RBP12.16□□□□□ -0.46
PVT1-208ENST00000519481 VN1R2Q8NFZ6 395 aa12.16□□□□□ -0.46
PVT1-208ENST00000519481 URGCPQ8TCY9 931 aa12.16□□□□□ -0.46
PVT1-208ENST00000519481 SUSD6Q92537 303 aa12.16□□□□□ -0.46
PVT1-208ENST00000519481 FAM105AQ9NUU6 356 aa12.16□□□□□ -0.46
PVT1-208ENST00000519481 VAV3Q9UKW4 847 aa12.16□□□□□ -0.46
PVT1-208ENST00000519481 INPP5FQ9Y2H2 1132 aa12.16□□□□□ -0.46
PVT1-208ENST00000519481 HIDE1A8MVS5 230 aa12.15□□□□□ -0.46
PVT1-208ENST00000519481 NT5C1B-RDH14C9J2C7 533 aa12.15□□□□□ -0.46
PVT1-208ENST00000519481 ZNF623O75123 536 aa12.15□□□□□ -0.46
PVT1-208ENST00000519481 SRGAP2CP0DJJ0 459 aa12.15□□□□□ -0.46
PVT1-208ENST00000519481 YWHABP31946 246 aaKnown RBP12.15□□□□□ -0.46
PVT1-208ENST00000519481 KRT2P35908 639 aa12.15□□□□□ -0.46
PVT1-208ENST00000519481 NCBP1Q09161 790 aaKnown RBP12.15□□□□□ -0.46
PVT1-208ENST00000519481 TRIM29Q14134 588 aa12.15□□□□□ -0.46
PVT1-208ENST00000519481 XKR9Q5GH70 373 aa12.15□□□□□ -0.46
PVT1-208ENST00000519481 TRIM67Q6ZTA4 783 aa12.15□□□□□ -0.46
PVT1-208ENST00000519481 HFE2Q6ZVN8 426 aa12.15□□□□□ -0.46
PVT1-208ENST00000519481 ZBTB33Q86T24 672 aa12.15□□□□□ -0.46
PVT1-208ENST00000519481 KSR1Q8IVT5 923 aa12.15□□□□□ -0.46
PVT1-208ENST00000519481 VPS52Q8N1B4 723 aa12.15□□□□□ -0.46
PVT1-208ENST00000519481 LPPQ93052 612 aa12.15□□□□□ -0.46
PVT1-208ENST00000519481 CCDC43Q96MW1 224 aaKnown RBP12.15□□□□□ -0.46
PVT1-208ENST00000519481 NECTIN4Q96NY8 510 aa12.15□□□□□ -0.46
PVT1-208ENST00000519481 FAM193BQ96PV7 902 aaPredicted RBP12.15□□□□□ -0.46
PVT1-208ENST00000519481 LXNQ9BS40 222 aa12.15□□□□□ -0.46
PVT1-208ENST00000519481 APOL5Q9BWW9 433 aa12.15□□□□□ -0.46
PVT1-208ENST00000519481 DHX33Q9H6R0 707 aaKnown RBP12.15□□□□□ -0.46
PVT1-208ENST00000519481 ZSWIM4Q9H7M6 989 aa12.15□□□□□ -0.46
PVT1-208ENST00000519481 STK39Q9UEW8 545 aa12.15□□□□□ -0.46
PVT1-208ENST00000519481 TPCN1Q9ULQ1 816 aa12.15□□□□□ -0.46
PVT1-208ENST00000519481 NR2E1Q9Y466 385 aa12.15□□□□□ -0.46
PVT1-208ENST00000519481 PIEZO1Q92508 2521 aa12.14□□□□□ -0.47
PVT1-208ENST00000519481 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.14□□□□□ -0.47
PVT1-208ENST00000519481 TMEM221A6NGB7 291 aa12.14□□□□□ -0.47
PVT1-208ENST00000519481 C2orf71A6NGG8 1288 aa12.14□□□□□ -0.47
PVT1-208ENST00000519481 M0R296 226 aa12.14□□□□□ -0.47
PVT1-208ENST00000519481 ERLIN2O94905 339 aa12.14□□□□□ -0.47
PVT1-208ENST00000519481 ZXDAP98168 799 aa12.14□□□□□ -0.47
PVT1-208ENST00000519481 ITIH3Q06033 890 aa12.14□□□□□ -0.47
PVT1-208ENST00000519481 KCNC3Q14003 757 aa12.14□□□□□ -0.47
PVT1-208ENST00000519481 LONRF3Q496Y0 759 aa12.14□□□□□ -0.47
PVT1-208ENST00000519481 SYCE2Q6PIF2 218 aa12.14□□□□□ -0.47
PVT1-208ENST00000519481 BMP8AQ7Z5Y6 402 aa12.14□□□□□ -0.47
PVT1-208ENST00000519481 SUGP1Q8IWZ8 645 aaKnown RBP12.14□□□□□ -0.47
PVT1-208ENST00000519481 CNNM3Q8NE01 707 aa12.14□□□□□ -0.47
PVT1-208ENST00000519481 OXER1Q8TDS5 423 aa12.14□□□□□ -0.47
PVT1-208ENST00000519481 PRPF31Q8WWY3 499 aaKnown RBP12.14□□□□□ -0.47
PVT1-208ENST00000519481 TMEM143Q96AN5 459 aa12.14□□□□□ -0.47
PVT1-208ENST00000519481 PBXIP1Q96AQ6 731 aa12.14□□□□□ -0.47
PVT1-208ENST00000519481 DYDC2Q96IM9 177 aa12.14□□□□□ -0.47
PVT1-208ENST00000519481 GBP3Q9H0R5 595 aa12.14□□□□□ -0.47
PVT1-208ENST00000519481 S1PR5Q9H228 398 aa12.14□□□□□ -0.47
PVT1-208ENST00000519481 AGPAT5Q9NUQ2 364 aa12.14□□□□□ -0.47
PVT1-208ENST00000519481 TBC1D13Q9NVG8 400 aa12.14□□□□□ -0.47
PVT1-208ENST00000519481 DZANK1Q9NVP4 752 aa12.14□□□□□ -0.47
PVT1-208ENST00000519481 KANSL3Q9P2N6 904 aa12.14□□□□□ -0.47
PVT1-208ENST00000519481 PCDHB2Q9Y5E7 798 aa12.14□□□□□ -0.47
PVT1-208ENST00000519481 HCFC2Q9Y5Z7 792 aa12.14□□□□□ -0.47
PVT1-208ENST00000519481 CNTNAP2Q9UHC6 1331 aa12.13□□□□□ -0.47
PVT1-208ENST00000519481 SPDYE4A6NLX3 237 aa12.13□□□□□ -0.47
PVT1-208ENST00000519481 OFD1O75665 1012 aa12.13□□□□□ -0.47
PVT1-208ENST00000519481 GALTP07902 379 aa12.13□□□□□ -0.47
PVT1-208ENST00000519481 CTSAP10619 480 aa12.13□□□□□ -0.47
PVT1-208ENST00000519481 MTHFRP42898 656 aa12.13□□□□□ -0.47
PVT1-208ENST00000519481 AK2P54819 239 aa12.13□□□□□ -0.47
PVT1-208ENST00000519481 CYP4A11Q02928 519 aa12.13□□□□□ -0.47
PVT1-208ENST00000519481 LAMTOR4Q0VGL1 99 aa12.13□□□□□ -0.47
PVT1-208ENST00000519481 TFDP1Q14186 410 aa12.13□□□□□ -0.47
PVT1-208ENST00000519481 MXD4Q14582 209 aaPredicted RBP12.13□□□□□ -0.47
PVT1-208ENST00000519481 EMC2Q15006 297 aa12.13□□□□□ -0.47
PVT1-208ENST00000519481 PCBP1Q15365 356 aaKnown RBP eCLIP12.13□□□□□ -0.47
PVT1-208ENST00000519481 DDX53Q86TM3 631 aaKnown RBP12.13□□□□□ -0.47
PVT1-208ENST00000519481 PPFIBP1Q86W92 1011 aa12.13□□□□□ -0.47
PVT1-208ENST00000519481 TPH2Q8IWU9 490 aa12.13□□□□□ -0.47
PVT1-208ENST00000519481 RNF149Q8NC42 400 aa12.13□□□□□ -0.47
PVT1-208ENST00000519481 HAS1Q92839 578 aa12.13□□□□□ -0.47
PVT1-208ENST00000519481 IGSF21Q96ID5 467 aa12.13□□□□□ -0.47
PVT1-208ENST00000519481 RIPOR3Q96MK2 946 aa12.13□□□□□ -0.47
PVT1-208ENST00000519481 MTRQ99707 1265 aa12.13□□□□□ -0.47
PVT1-208ENST00000519481 PRRX2Q99811 253 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms