RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 TYW1Q9NV66 732 aaKnown RBP20.69■□□□□ 0.9
FAM49B-208ENST00000518344 CHD7Q9P2D1 2997 aa20.69■□□□□ 0.9
FAM49B-208ENST00000518344 TSPAN1O60635 241 aa20.68■□□□□ 0.9
FAM49B-208ENST00000518344 SSBP05455 408 aaKnown RBP eCLIP20.68■□□□□ 0.9
FAM49B-208ENST00000518344 SKIP12755 728 aa20.68■□□□□ 0.9
FAM49B-208ENST00000518344 HOXA11P31270 313 aaPredicted RBP20.68■□□□□ 0.9
FAM49B-208ENST00000518344 UBA7P41226 1012 aa20.68■□□□□ 0.9
FAM49B-208ENST00000518344 GRIN1Q05586 938 aa20.68■□□□□ 0.9
FAM49B-208ENST00000518344 KCNK18Q7Z418 384 aa20.68■□□□□ 0.9
FAM49B-208ENST00000518344 ZNF598Q86UK7 904 aaKnown RBP20.68■□□□□ 0.9
FAM49B-208ENST00000518344 IFNLR1Q8IU57 520 aaPredicted RBP20.68■□□□□ 0.9
FAM49B-208ENST00000518344 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.68■□□□□ 0.9
FAM49B-208ENST00000518344 HELQQ8TDG4 1101 aa20.68■□□□□ 0.9
FAM49B-208ENST00000518344 LPPQ93052 612 aa20.68■□□□□ 0.9
FAM49B-208ENST00000518344 CASD1Q96PB1 797 aa20.68■□□□□ 0.9
FAM49B-208ENST00000518344 PNMA5Q96PV4 448 aa20.68■□□□□ 0.9
FAM49B-208ENST00000518344 TRAIPQ9BWF2 469 aa20.68■□□□□ 0.9
FAM49B-208ENST00000518344 PLVAPQ9BX97 442 aa20.68■□□□□ 0.9
FAM49B-208ENST00000518344 NFKBIZQ9BYH8 718 aa20.68■□□□□ 0.9
FAM49B-208ENST00000518344 NT5C3AQ9H0P0 336 aa20.68■□□□□ 0.9
FAM49B-208ENST00000518344 PRDM6Q9NQX0 595 aa20.68■□□□□ 0.9
FAM49B-208ENST00000518344 RNF19AQ9NV58 838 aa20.68■□□□□ 0.9
FAM49B-208ENST00000518344 PCDHB2Q9Y5E7 798 aa20.68■□□□□ 0.9
FAM49B-208ENST00000518344 ARID2Q68CP9 1835 aa20.68■□□□□ 0.9
FAM49B-208ENST00000518344 C5orf67F2Z3F1 127 aa20.67■□□□□ 0.9
FAM49B-208ENST00000518344 ATF7P17544 494 aaPredicted RBP20.67■□□□□ 0.9
FAM49B-208ENST00000518344 LONP1P36776 959 aaKnown RBP20.67■□□□□ 0.9
FAM49B-208ENST00000518344 RAB27AP51159 221 aa20.67■□□□□ 0.9
FAM49B-208ENST00000518344 PCBP1Q15365 356 aaKnown RBP eCLIP20.67■□□□□ 0.94e-6■■■■■ 36.2
FAM49B-208ENST00000518344 CLLU1OSQ5K130 101 aa20.67■□□□□ 0.9
FAM49B-208ENST00000518344 HYIQ5T013 277 aa20.67■□□□□ 0.9
FAM49B-208ENST00000518344 FOXD4L5Q5VV16 416 aaPredicted RBP20.67■□□□□ 0.9
FAM49B-208ENST00000518344 ZBTB8OSQ8IWT0 167 aa20.67■□□□□ 0.9
FAM49B-208ENST00000518344 FOXD4L4Q8WXT5 416 aaPredicted RBP20.67■□□□□ 0.9
FAM49B-208ENST00000518344 BSNDQ8WZ55 320 aa20.67■□□□□ 0.9
FAM49B-208ENST00000518344 CPB2Q96IY4 423 aa20.67■□□□□ 0.9
FAM49B-208ENST00000518344 ALG13Q9NP73 1137 aaKnown RBP20.67■□□□□ 0.9
FAM49B-208ENST00000518344 AAASQ9NRG9 546 aa20.67■□□□□ 0.9
FAM49B-208ENST00000518344 HCSTQ9UBK5 93 aa20.67■□□□□ 0.9
FAM49B-208ENST00000518344 GRM6O15303 877 aa20.66■□□□□ 0.9
FAM49B-208ENST00000518344 ZNF623O75123 536 aa20.66■□□□□ 0.9
FAM49B-208ENST00000518344 CSPG5O95196 566 aa20.66■□□□□ 0.9
FAM49B-208ENST00000518344 MARCKSP29966 332 aaPredicted RBP20.66■□□□□ 0.9
FAM49B-208ENST00000518344 AXLP30530 894 aa20.66■□□□□ 0.9
FAM49B-208ENST00000518344 PTPAQ15257 358 aa20.66■□□□□ 0.9
FAM49B-208ENST00000518344 KLHL23Q8NBE8 558 aa20.66■□□□□ 0.9
FAM49B-208ENST00000518344 RASSF8Q8NHQ8 419 aa20.66■□□□□ 0.9
FAM49B-208ENST00000518344 KIFAP3Q92845 792 aa20.66■□□□□ 0.9
FAM49B-208ENST00000518344 PGBD4Q96DM1 585 aa20.66■□□□□ 0.9
FAM49B-208ENST00000518344 MRPL38Q96DV4 380 aaKnown RBP20.66■□□□□ 0.9
FAM49B-208ENST00000518344 CALML4Q96GE6 196 aa20.66■□□□□ 0.9
FAM49B-208ENST00000518344 IFT74Q96LB3 600 aa20.66■□□□□ 0.9
FAM49B-208ENST00000518344 RUSC1Q9BVN2 902 aa20.66■□□□□ 0.9
FAM49B-208ENST00000518344 PCDHB12Q9Y5F1 795 aa20.66■□□□□ 0.9
FAM49B-208ENST00000518344 LIG1P18858 919 aa20.65■□□□□ 0.9
FAM49B-208ENST00000518344 PPP2R5AQ15172 486 aa20.65■□□□□ 0.9
FAM49B-208ENST00000518344 UBXN11Q5T124 520 aa20.65■□□□□ 0.9
FAM49B-208ENST00000518344 RINT1Q6NUQ1 792 aa20.65■□□□□ 0.9
FAM49B-208ENST00000518344 NOTUMQ6P988 496 aa20.65■□□□□ 0.9
FAM49B-208ENST00000518344 LRRC55Q6ZSA7 311 aa20.65■□□□□ 0.9
FAM49B-208ENST00000518344 LRRC43Q8N309 656 aa20.65■□□□□ 0.9
FAM49B-208ENST00000518344 DEPTORQ8TB45 409 aa20.65■□□□□ 0.9
FAM49B-208ENST00000518344 C2orf40Q9H1Z8 148 aa20.65■□□□□ 0.9
FAM49B-208ENST00000518344 PLAGL2Q9UPG8 496 aa20.65■□□□□ 0.9
FAM49B-208ENST00000518344 MEIS3P2A8K0S8 358 aa20.64■□□□□ 0.89
FAM49B-208ENST00000518344 B4GALT5O43286 388 aa20.64■□□□□ 0.89
FAM49B-208ENST00000518344 ARF4P18085 180 aaPredicted RBP20.64■□□□□ 0.89
FAM49B-208ENST00000518344 NAMPTP43490 491 aa20.64■□□□□ 0.89
FAM49B-208ENST00000518344 AMHR2Q16671 573 aa20.64■□□□□ 0.89
FAM49B-208ENST00000518344 TMEM132AQ24JP5 1023 aa20.64■□□□□ 0.89
FAM49B-208ENST00000518344 TMEM119Q4V9L6 283 aa20.64■□□□□ 0.89
FAM49B-208ENST00000518344 NAALADL2Q58DX5 795 aa20.64■□□□□ 0.89
FAM49B-208ENST00000518344 SPECC1Q5M775 1068 aa20.64■□□□□ 0.89
FAM49B-208ENST00000518344 GLB1LQ6UWU2 654 aa20.64■□□□□ 0.89
FAM49B-208ENST00000518344 CDR2LQ86X02 465 aaPredicted RBP20.64■□□□□ 0.89
FAM49B-208ENST00000518344 KCTD17Q8N5Z5 321 aa20.64■□□□□ 0.89
FAM49B-208ENST00000518344 P2RX5Q93086 422 aa20.64■□□□□ 0.89
FAM49B-208ENST00000518344 USP28Q96RU2 1077 aa20.64■□□□□ 0.89
FAM49B-208ENST00000518344 EIF2AQ9BY44 585 aaKnown RBP20.64■□□□□ 0.89
FAM49B-208ENST00000518344 CWH43Q9H720 699 aa20.64■□□□□ 0.89
FAM49B-208ENST00000518344 INPP5FQ9Y2H2 1132 aa20.64■□□□□ 0.89
FAM49B-208ENST00000518344 EYSQ5T1H1 3165 aa20.64■□□□□ 0.89
FAM49B-208ENST00000518344 CCDC169A6NNP5 214 aa20.63■□□□□ 0.89
FAM49B-208ENST00000518344 SLC26A4O43511 780 aa20.63■□□□□ 0.89
FAM49B-208ENST00000518344 HIP1RO75146 1068 aa20.63■□□□□ 0.89
FAM49B-208ENST00000518344 ITGB1P05556 798 aa20.63■□□□□ 0.89
FAM49B-208ENST00000518344 PLA2G4BP0C869 781 aa20.63■□□□□ 0.89
FAM49B-208ENST00000518344 LAG3P18627 525 aa20.63■□□□□ 0.89
FAM49B-208ENST00000518344 RAD51AP2Q09MP3 1159 aa20.63■□□□□ 0.89
FAM49B-208ENST00000518344 DHX8Q14562 1220 aaKnown RBP20.63■□□□□ 0.89
FAM49B-208ENST00000518344 CDCA2Q69YH5 1023 aaPredicted RBP20.63■□□□□ 0.89
FAM49B-208ENST00000518344 C1orf186Q6ZWK4 172 aa20.63■□□□□ 0.89
FAM49B-208ENST00000518344 MRPL10Q7Z7H8 261 aaKnown RBP20.63■□□□□ 0.89
FAM49B-208ENST00000518344 THNSL1Q8IYQ7 743 aa20.63■□□□□ 0.89
FAM49B-208ENST00000518344 SYT2Q8N9I0 419 aaPredicted RBP20.63■□□□□ 0.89
FAM49B-208ENST00000518344 COLGALT1Q8NBJ5 622 aa20.63■□□□□ 0.89
FAM49B-208ENST00000518344 CCDC51Q96ER9 411 aa20.63■□□□□ 0.89
FAM49B-208ENST00000518344 KIFC3Q9BVG8 833 aa20.63■□□□□ 0.89
FAM49B-208ENST00000518344 TRIM6Q9C030 488 aaPredicted RBP20.63■□□□□ 0.89
FAM49B-208ENST00000518344 LMAN2LQ9H0V9 348 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms