RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 HOXA2O43364 376 aa11.83□□□□□ -0.52
PDGFRB-203ENST00000517660 NDUFV1P49821 464 aa11.83□□□□□ -0.52
PDGFRB-203ENST00000517660 RBM10P98175 930 aaKnown RBP11.83□□□□□ -0.52
PDGFRB-203ENST00000517660 ST3GAL1Q11201 340 aa11.83□□□□□ -0.52
PDGFRB-203ENST00000517660 DRP2Q13474 957 aa11.83□□□□□ -0.52
PDGFRB-203ENST00000517660 SAFBQ15424 915 aaKnown RBP eCLIP11.83□□□□□ -0.52
PDGFRB-203ENST00000517660 NCAPH2Q6IBW4 605 aa11.83□□□□□ -0.52
PDGFRB-203ENST00000517660 OTUD6AQ7L8S5 288 aa11.83□□□□□ -0.52
PDGFRB-203ENST00000517660 C4orf19Q8IY42 314 aa11.83□□□□□ -0.52
PDGFRB-203ENST00000517660 KLHL23Q8NBE8 558 aa11.83□□□□□ -0.52
PDGFRB-203ENST00000517660 SPPL3Q8TCT6 385 aa11.83□□□□□ -0.52
PDGFRB-203ENST00000517660 CEP170P1Q96L14 293 aa11.83□□□□□ -0.52
PDGFRB-203ENST00000517660 INO80BQ9C086 356 aaPredicted RBP11.83□□□□□ -0.52
PDGFRB-203ENST00000517660 SMOC2Q9H3U7 446 aa11.83□□□□□ -0.52
PDGFRB-203ENST00000517660 ZSWIM4Q9H7M6 989 aa11.83□□□□□ -0.52
PDGFRB-203ENST00000517660 CYP26B1Q9NR63 512 aa11.83□□□□□ -0.52
PDGFRB-203ENST00000517660 CHST12Q9NRB3 414 aa11.83□□□□□ -0.52
PDGFRB-203ENST00000517660 AAASQ9NRG9 546 aa11.83□□□□□ -0.52
PDGFRB-203ENST00000517660 PCDHGC5Q9Y5F6 944 aa11.83□□□□□ -0.52
PDGFRB-203ENST00000517660 A0A087WZ62 844 aa11.82□□□□□ -0.52
PDGFRB-203ENST00000517660 ITGB1P05556 798 aa11.82□□□□□ -0.52
PDGFRB-203ENST00000517660 RFC5P40937 340 aa11.82□□□□□ -0.52
PDGFRB-203ENST00000517660 FOSBP53539 338 aa11.82□□□□□ -0.52
PDGFRB-203ENST00000517660 NPEPPSP55786 919 aa11.82□□□□□ -0.52
PDGFRB-203ENST00000517660 SPIRE1Q08AE8 756 aa11.82□□□□□ -0.52
PDGFRB-203ENST00000517660 CALCRLQ16602 461 aa11.82□□□□□ -0.52
PDGFRB-203ENST00000517660 C8orf34Q49A92 452 aa11.82□□□□□ -0.52
PDGFRB-203ENST00000517660 SPOUT1Q5T280 376 aaKnown RBP11.82□□□□□ -0.52
PDGFRB-203ENST00000517660 PLA2G4FQ68DD2 849 aa11.82□□□□□ -0.52
PDGFRB-203ENST00000517660 ZNF410Q86VK4 478 aa11.82□□□□□ -0.52
PDGFRB-203ENST00000517660 ECHDC2Q86YB7 292 aa11.82□□□□□ -0.52
PDGFRB-203ENST00000517660 CCDC83Q8IWF9 413 aa11.82□□□□□ -0.52
PDGFRB-203ENST00000517660 EFHBQ8N7U6 833 aa11.82□□□□□ -0.52
PDGFRB-203ENST00000517660 VN1R2Q8NFZ6 395 aa11.82□□□□□ -0.52
PDGFRB-203ENST00000517660 SLC7A3Q8WY07 619 aa11.82□□□□□ -0.52
PDGFRB-203ENST00000517660 DYDC2Q96IM9 177 aa11.82□□□□□ -0.52
PDGFRB-203ENST00000517660 FDXACB1Q9BRP7 624 aaPredicted RBP11.82□□□□□ -0.52
PDGFRB-203ENST00000517660 TMEM117Q9H0C3 514 aa11.82□□□□□ -0.52
PDGFRB-203ENST00000517660 TYW1Q9NV66 732 aaKnown RBP11.82□□□□□ -0.52
PDGFRB-203ENST00000517660 DACT1Q9NYF0 836 aa11.82□□□□□ -0.52
PDGFRB-203ENST00000517660 DLL3Q9NYJ7 618 aa11.82□□□□□ -0.52
PDGFRB-203ENST00000517660 RGL1Q9NZL6 768 aa11.82□□□□□ -0.52
PDGFRB-203ENST00000517660 RALYQ9UKM9 306 aaKnown RBP11.82□□□□□ -0.52
PDGFRB-203ENST00000517660 PCDHA12Q9UN75 941 aa11.82□□□□□ -0.52
PDGFRB-203ENST00000517660 PCDHB12Q9Y5F1 795 aa11.82□□□□□ -0.52
PDGFRB-203ENST00000517660 A0A0U1RQF3 1178 aa11.81□□□□□ -0.52
PDGFRB-203ENST00000517660 SLITRK3O94933 977 aa11.81□□□□□ -0.52
PDGFRB-203ENST00000517660 EOMESO95936 686 aa11.81□□□□□ -0.52
PDGFRB-203ENST00000517660 FGFR1P11362 822 aa11.81□□□□□ -0.52
PDGFRB-203ENST00000517660 FGFR4P22455 802 aa11.81□□□□□ -0.52
PDGFRB-203ENST00000517660 SFPQP23246 707 aaKnown RBP eCLIP11.81□□□□□ -0.52
PDGFRB-203ENST00000517660 YWHABP31946 246 aaKnown RBP11.81□□□□□ -0.52
PDGFRB-203ENST00000517660 POLGP54098 1239 aaPredicted RBP11.81□□□□□ -0.52
PDGFRB-203ENST00000517660 CTTNQ14247 550 aaKnown RBP11.81□□□□□ -0.52
PDGFRB-203ENST00000517660 RHPN2Q8IUC4 686 aa11.81□□□□□ -0.52
PDGFRB-203ENST00000517660 TPH2Q8IWU9 490 aa11.81□□□□□ -0.52
PDGFRB-203ENST00000517660 ZNF579Q8NAF0 562 aaKnown RBP11.81□□□□□ -0.52
PDGFRB-203ENST00000517660 POF1BQ8WVV4 589 aa11.81□□□□□ -0.52
PDGFRB-203ENST00000517660 PPP2R3CQ969Q6 453 aa11.81□□□□□ -0.52
PDGFRB-203ENST00000517660 C8orf76Q96K31 380 aa11.81□□□□□ -0.52
PDGFRB-203ENST00000517660 KIF2CQ99661 725 aa11.81□□□□□ -0.52
PDGFRB-203ENST00000517660 HSD17B14Q9BPX1 270 aa11.81□□□□□ -0.52
PDGFRB-203ENST00000517660 LXNQ9BS40 222 aa11.81□□□□□ -0.52
PDGFRB-203ENST00000517660 DHX33Q9H6R0 707 aaKnown RBP11.81□□□□□ -0.52
PDGFRB-203ENST00000517660 TTC12Q9H892 705 aaPredicted RBP11.81□□□□□ -0.52
PDGFRB-203ENST00000517660 SH2B1Q9NRF2 756 aaPredicted RBP11.81□□□□□ -0.52
PDGFRB-203ENST00000517660 WRAP73Q9P2S5 460 aaPredicted RBP11.81□□□□□ -0.52
PDGFRB-203ENST00000517660 ASAP2O43150 1006 aa11.8□□□□□ -0.52
PDGFRB-203ENST00000517660 GAS2O43903 313 aaKnown RBP11.8□□□□□ -0.52
PDGFRB-203ENST00000517660 NEMFO60524 1076 aa11.8□□□□□ -0.52
PDGFRB-203ENST00000517660 CSDE1O75534 798 aaKnown RBP11.8□□□□□ -0.52
PDGFRB-203ENST00000517660 LYPLA2O95372 231 aa11.8□□□□□ -0.52
PDGFRB-203ENST00000517660 BRD1O95696 1058 aa11.8□□□□□ -0.52
PDGFRB-203ENST00000517660 SKIP12755 728 aa11.8□□□□□ -0.52
PDGFRB-203ENST00000517660 LAG3P18627 525 aa11.8□□□□□ -0.52
PDGFRB-203ENST00000517660 TXKP42681 527 aa11.8□□□□□ -0.52
PDGFRB-203ENST00000517660 RBM25P49756 843 aaKnown RBP11.8□□□□□ -0.52
PDGFRB-203ENST00000517660 HMGN5P82970 282 aaKnown RBP11.8□□□□□ -0.52
PDGFRB-203ENST00000517660 GUCY1B3Q02153 619 aa11.8□□□□□ -0.52
PDGFRB-203ENST00000517660 CYP4A11Q02928 519 aa11.8□□□□□ -0.52
PDGFRB-203ENST00000517660 UBE3AQ05086 875 aa11.8□□□□□ -0.52
PDGFRB-203ENST00000517660 XKR9Q5GH70 373 aa11.8□□□□□ -0.52
PDGFRB-203ENST00000517660 ZNF598Q86UK7 904 aaKnown RBP11.8□□□□□ -0.52
PDGFRB-203ENST00000517660 KSR1Q8IVT5 923 aa11.8□□□□□ -0.52
PDGFRB-203ENST00000517660 KIAA2013Q8IYS2 634 aa11.8□□□□□ -0.52
PDGFRB-203ENST00000517660 ABI1Q8IZP0 508 aa11.8□□□□□ -0.52
PDGFRB-203ENST00000517660 RNF169Q8NCN4 708 aa11.8□□□□□ -0.52
PDGFRB-203ENST00000517660 PRPF31Q8WWY3 499 aaKnown RBP11.8□□□□□ -0.52
PDGFRB-203ENST00000517660 PSPC1Q8WXF1 523 aaKnown RBP11.8□□□□□ -0.52
PDGFRB-203ENST00000517660 CASD1Q96PB1 797 aa11.8□□□□□ -0.52
PDGFRB-203ENST00000517660 MTMR9Q96QG7 549 aa11.8□□□□□ -0.52
PDGFRB-203ENST00000517660 EIF2AK1Q9BQI3 630 aaKnown RBP11.8□□□□□ -0.52
PDGFRB-203ENST00000517660 TRAIPQ9BWF2 469 aa11.8□□□□□ -0.52
PDGFRB-203ENST00000517660 CWH43Q9H720 699 aa11.8□□□□□ -0.52
PDGFRB-203ENST00000517660 RNF19AQ9NV58 838 aa11.8□□□□□ -0.52
PDGFRB-203ENST00000517660 COL4A3BPQ9Y5P4 624 aa11.8□□□□□ -0.52
PDGFRB-203ENST00000517660 WNT7AO00755 349 aa11.79□□□□□ -0.52
PDGFRB-203ENST00000517660 ATF7P17544 494 aaPredicted RBP11.79□□□□□ -0.52
PDGFRB-203ENST00000517660 ATP2B1P20020 1258 aa11.79□□□□□ -0.52
PDGFRB-203ENST00000517660 NRIP1P48552 1158 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms