RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 CSADQ9Y600 493 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 SLC30A1Q9Y6M5 507 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 PLA2R1Q13018 1463 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 TCHHQ07283 1943 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 SUPT6HQ7KZ85 1726 aaKnown RBP5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 LAMC1P11047 1609 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 MYPNQ86TC9 1320 aa5.23□□□□□ -1.57
HMGB1P19-201ENST00000517578 NSD2O96028 1365 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 ABCC11Q96J66 1382 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 PIK3R4Q99570 1358 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 HTR3EA5X5Y0 456 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 MAGEA13PA6NCF6 341 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 GMNCA6NCL1 334 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 PABPN1LA6NDY0 278 aaKnown RBP5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 TTC34A8MYJ7 566 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 H0YC42 278 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 EIF3FO00303 357 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 CETN3O15182 167 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 STRNO43815 780 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 PFKFB2O60825 505 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 CBFA2T3O75081 653 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 MAP4K4O95819 1239 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 GNAI3P08754 354 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 ACADSP16219 412 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 PORP16435 677 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 ITIH2P19823 946 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 ATP6V1C1P21283 382 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 ERCC5P28715 1186 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 LSP1P33241 339 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 NTF4P34130 210 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 ZNF131P52739 623 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 USP14P54578 494 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 INHBCP55103 352 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 MTTPP55157 894 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 TPD52P55327 224 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 ERVK-24P63145 666 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 DAB2P98082 770 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 PPIDQ08752 370 aaKnown RBP5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 ZNF252P-AS1Q0IIN9 211 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 ITGA9Q13797 1035 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 PPP1R7Q15435 360 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 PTGISQ16647 500 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 MUM1Q2TAK8 710 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 HSP90AA5PQ58FG0 334 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 MEI1Q5TIA1 1274 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 RASIP1Q5U651 963 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 PCNX4Q63HM2 1172 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 HIBCHQ6NVY1 386 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 LLGL2Q6P1M3 1020 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 CCDC174Q6PII3 467 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 C3orf62Q6ZUJ4 267 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 FAM214BQ7L5A3 538 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 SAPCD2Q86UD0 394 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 FAM228AQ86W67 206 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 PASD1Q8IV76 773 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 CD302Q8IX05 232 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 PIP4K2CQ8TBX8 421 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 PI4K2BQ8TCG2 481 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 DQX1Q8TE96 717 aaKnown RBP5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 NOC3LQ8WTT2 800 aaKnown RBP5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 TMEM40Q8WWA1 233 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 NCSTNQ92542 709 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 PTPRN2Q92932 1015 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 SKA1Q96BD8 255 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 SNF8Q96H20 258 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 TUBGCP5Q96RT8 1024 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 HNRNPABQ99729 332 aaKnown RBP5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 NAPGQ99747 312 aaPredicted RBP5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 SENP7Q9BQF6 1050 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 SEZ6LQ9BYH1 1024 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 NACAP1Q9BZK3 213 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 DRC3Q9H069 523 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 PLEKHA4Q9H4M7 779 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 CLK4Q9HAZ1 481 aaKnown RBP5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 PREBQ9HCU5 417 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 GTF3C4Q9UKN8 822 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 PCDHB2Q9Y5E7 798 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 ERBINQ96RT1 1412 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 GRIN2DO15399 1336 aa5.22□□□□□ -1.57
HMGB1P19-201ENST00000517578 TMEM265A0A087WTH1 108 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 DPPA5A6NC42 116 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 VWA3AA6NCI4 1184 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 TRIM43BA6NCK2 446 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 TRIM64CA6NLI5 447 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 DCDC2CA8MYV0 355 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 E9PMD0 336 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 MATN2O00339 956 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 PPIP5K2O43314 1243 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 AKR1B10O60218 316 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 BBOX1O75936 387 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 ATP5HO75947 161 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 ZNF202O95125 648 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 LCA5LO95447 670 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 HSPA8P11142 646 aaKnown RBP5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 MYCLP1P12525 358 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 CASP14P31944 242 aa5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 HSPA9P38646 679 aaKnown RBP5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 MDH1P40925 334 aaKnown RBP5.21□□□□□ -1.58
HMGB1P19-201ENST00000517578 CLCN2P51788 898 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms