RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 UBE3AQ05086 875 aa27.36■■□□□ 1.97
PVT1-204ENST00000517525 CAPSQ13938 189 aa27.36■■□□□ 1.97
PVT1-204ENST00000517525 SKIV2LQ15477 1246 aaKnown RBP27.36■■□□□ 1.97
PVT1-204ENST00000517525 ECM1Q16610 540 aa27.36■■□□□ 1.97
PVT1-204ENST00000517525 CLLU1OSQ5K130 101 aa27.36■■□□□ 1.97
PVT1-204ENST00000517525 BRAPQ7Z569 592 aa27.36■■□□□ 1.97
PVT1-204ENST00000517525 KCTD17Q8N5Z5 321 aa27.36■■□□□ 1.97
PVT1-204ENST00000517525 KLHL23Q8NBE8 558 aa27.36■■□□□ 1.97
PVT1-204ENST00000517525 COL25A1Q9BXS0 654 aaPredicted RBP27.36■■□□□ 1.97
PVT1-204ENST00000517525 NSUN3Q9H649 340 aaKnown RBP27.36■■□□□ 1.97
PVT1-204ENST00000517525 FAM105AQ9NUU6 356 aa27.36■■□□□ 1.97
PVT1-204ENST00000517525 PCDHB12Q9Y5F1 795 aa27.36■■□□□ 1.97
PVT1-204ENST00000517525 TTC28Q96AY4 2481 aa27.36■■□□□ 1.97
PVT1-204ENST00000517525 USO1O60763 962 aaKnown RBP27.35■■□□□ 1.97
PVT1-204ENST00000517525 LAG3P18627 525 aa27.35■■□□□ 1.97
PVT1-204ENST00000517525 CAMK1Q14012 370 aa27.35■■□□□ 1.97
PVT1-204ENST00000517525 MRPL10Q7Z7H8 261 aaKnown RBP27.35■■□□□ 1.97
PVT1-204ENST00000517525 ABI1Q8IZP0 508 aa27.35■■□□□ 1.97
PVT1-204ENST00000517525 LRRC43Q8N309 656 aa27.35■■□□□ 1.97
PVT1-204ENST00000517525 CCDC51Q96ER9 411 aa27.35■■□□□ 1.97
PVT1-204ENST00000517525 POLR3FQ9H1D9 316 aaPredicted RBP27.35■■□□□ 1.97
PVT1-204ENST00000517525 NCK2O43639 380 aa27.34■■□□□ 1.97
PVT1-204ENST00000517525 IBSPP21815 317 aaPredicted RBP27.34■■□□□ 1.97
PVT1-204ENST00000517525 PADI6Q6TGC4 694 aa27.34■■□□□ 1.97
PVT1-204ENST00000517525 LRRC55Q6ZSA7 311 aa27.34■■□□□ 1.97
PVT1-204ENST00000517525 MRPL9Q9BYD2 267 aaKnown RBP27.34■■□□□ 1.97
PVT1-204ENST00000517525 BRWD1Q9NSI6 2320 aa27.34■■□□□ 1.97
PVT1-204ENST00000517525 ARHGEF35A5YM69 484 aa27.33■■□□□ 1.97
PVT1-204ENST00000517525 MBTD1Q05BQ5 628 aa27.33■■□□□ 1.97
PVT1-204ENST00000517525 KRT79Q5XKE5 535 aa27.33■■□□□ 1.97
PVT1-204ENST00000517525 COLGALT1Q8NBJ5 622 aa27.33■■□□□ 1.97
PVT1-204ENST00000517525 SNX29Q8TEQ0 813 aa27.33■■□□□ 1.97
PVT1-204ENST00000517525 PGBD4Q96DM1 585 aa27.33■■□□□ 1.97
PVT1-204ENST00000517525 ALG13Q9NP73 1137 aaKnown RBP27.33■■□□□ 1.97
PVT1-204ENST00000517525 KIAA1024Q9UPX6 916 aa27.33■■□□□ 1.97
PVT1-204ENST00000517525 CARNS1A5YM72 827 aa27.32■■□□□ 1.96
PVT1-204ENST00000517525 BMP15O95972 392 aa27.32■■□□□ 1.96
PVT1-204ENST00000517525 PLCB3Q01970 1234 aa27.32■■□□□ 1.96
PVT1-204ENST00000517525 AMHR2Q16671 573 aa27.32■■□□□ 1.96
PVT1-204ENST00000517525 TCEAL5Q5H9L2 206 aa27.32■■□□□ 1.96
PVT1-204ENST00000517525 UBXN11Q5T124 520 aa27.32■■□□□ 1.96
PVT1-204ENST00000517525 CDCA2Q69YH5 1023 aaPredicted RBP27.32■■□□□ 1.96
PVT1-204ENST00000517525 CNNM3Q8NE01 707 aa27.32■■□□□ 1.96
PVT1-204ENST00000517525 SNX21Q969T3 373 aa27.32■■□□□ 1.96
PVT1-204ENST00000517525 MMTAG2Q9BU76 263 aaKnown RBP27.32■■□□□ 1.96
PVT1-204ENST00000517525 DAXXQ9UER7 740 aaPredicted RBP27.32■■□□□ 1.96
PVT1-204ENST00000517525 LZTS1Q9Y250 596 aa27.32■■□□□ 1.96
PVT1-204ENST00000517525 PCDHB2Q9Y5E7 798 aa27.32■■□□□ 1.96
PVT1-204ENST00000517525 MYO7AQ13402 2215 aa27.32■■□□□ 1.96
PVT1-204ENST00000517525 SLC26A4O43511 780 aa27.31■■□□□ 1.96
PVT1-204ENST00000517525 TSPAN1O60635 241 aa27.31■■□□□ 1.96
PVT1-204ENST00000517525 ERLIN2O94905 339 aa27.31■■□□□ 1.96
PVT1-204ENST00000517525 BMP1P13497 986 aa27.31■■□□□ 1.96
PVT1-204ENST00000517525 DNAJB1P25685 340 aa27.31■■□□□ 1.96
PVT1-204ENST00000517525 NCBP1Q09161 790 aaKnown RBP27.31■■□□□ 1.96
PVT1-204ENST00000517525 HYIQ5T013 277 aa27.31■■□□□ 1.96
PVT1-204ENST00000517525 RNF169Q8NCN4 708 aa27.31■■□□□ 1.96
PVT1-204ENST00000517525 UBE2ZQ9H832 354 aaPredicted RBP27.31■■□□□ 1.96
PVT1-204ENST00000517525 GPRC5CQ9NQ84 441 aa27.31■■□□□ 1.96
PVT1-204ENST00000517525 DDX19AQ9NUU7 478 aaKnown RBP27.31■■□□□ 1.96
PVT1-204ENST00000517525 K7ELQ4 463 aaPredicted RBP27.3■■□□□ 1.96
PVT1-204ENST00000517525 EYA4O95677 639 aa27.3■■□□□ 1.96
PVT1-204ENST00000517525 TFF2Q03403 129 aa27.3■■□□□ 1.96
PVT1-204ENST00000517525 FAM187BQ17R55 369 aa27.3■■□□□ 1.96
PVT1-204ENST00000517525 SPOUT1Q5T280 376 aaKnown RBP27.3■■□□□ 1.96
PVT1-204ENST00000517525 NOTUMQ6P988 496 aa27.3■■□□□ 1.96
PVT1-204ENST00000517525 PPP4R3CPQ6ZMV5 832 aa27.3■■□□□ 1.96
PVT1-204ENST00000517525 HELQQ8TDG4 1101 aa27.3■■□□□ 1.96
PVT1-204ENST00000517525 POF1BQ8WVV4 589 aa27.3■■□□□ 1.96
PVT1-204ENST00000517525 PRIMPOLQ96LW4 560 aa27.3■■□□□ 1.96
PVT1-204ENST00000517525 BHMT2Q9H2M3 363 aa27.3■■□□□ 1.96
PVT1-204ENST00000517525 HCSTQ9UBK5 93 aa27.3■■□□□ 1.96
PVT1-204ENST00000517525 DNM3Q9UQ16 869 aa27.3■■□□□ 1.96
PVT1-204ENST00000517525 CNTNAP2Q9UHC6 1331 aa27.3■■□□□ 1.96
PVT1-204ENST00000517525 SPTBN5Q9NRC6 3674 aaKnown RBP27.29■■□□□ 1.96
PVT1-204ENST00000517525 INO80B-WBP1J3KQ70 363 aa27.29■■□□□ 1.96
PVT1-204ENST00000517525 FGF18O76093 207 aa27.29■■□□□ 1.96
PVT1-204ENST00000517525 NCLP19338 710 aaKnown RBP27.29■■□□□ 1.96
PVT1-204ENST00000517525 PPM1AP35813 382 aa27.29■■□□□ 1.96
PVT1-204ENST00000517525 PDE12Q6L8Q7 609 aaKnown RBP27.29■■□□□ 1.96
PVT1-204ENST00000517525 KCNT2Q6UVM3 1135 aa27.29■■□□□ 1.96
PVT1-204ENST00000517525 GLB1LQ6UWU2 654 aa27.29■■□□□ 1.96
PVT1-204ENST00000517525 PABPC5Q96DU9 382 aaKnown RBP27.29■■□□□ 1.96
PVT1-204ENST00000517525 AK8Q96MA6 479 aa27.29■■□□□ 1.96
PVT1-204ENST00000517525 ZNF558Q96NG5 402 aa27.29■■□□□ 1.96
PVT1-204ENST00000517525 KIAA1671Q9BY89 1806 aa27.29■■□□□ 1.96
PVT1-204ENST00000517525 PP2D1A8MPX8 630 aa27.28■■□□□ 1.96
PVT1-204ENST00000517525 OFD1O75665 1012 aa27.28■■□□□ 1.96
PVT1-204ENST00000517525 CTC1Q2NKJ3 1217 aa27.28■■□□□ 1.96
PVT1-204ENST00000517525 AGMOQ6ZNB7 445 aa27.28■■□□□ 1.96
PVT1-204ENST00000517525 KIFAP3Q92845 792 aa27.28■■□□□ 1.96
PVT1-204ENST00000517525 CSRNP2Q9H175 543 aa27.28■■□□□ 1.96
PVT1-204ENST00000517525 C2orf40Q9H1Z8 148 aa27.28■■□□□ 1.96
PVT1-204ENST00000517525 FZD8Q9H461 694 aa27.28■■□□□ 1.96
PVT1-204ENST00000517525 UBN1Q9NPG3 1134 aa27.28■■□□□ 1.96
PVT1-204ENST00000517525 INPPL1O15357 1258 aa27.27■■□□□ 1.96
PVT1-204ENST00000517525 SYT1P21579 422 aa27.27■■□□□ 1.96
PVT1-204ENST00000517525 NAMPTP43490 491 aa27.27■■□□□ 1.96
PVT1-204ENST00000517525 PPP2R5AQ15172 486 aa27.27■■□□□ 1.96
PVT1-204ENST00000517525 LEXMQ3ZCV2 418 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms