RNA–Protein interactions for RNA: ENST00000517244.1

RN7SKP289-201, Transcript of RNA, 7SK small nuclear pseudogene 289, humanhuman

BASIC

Gene RN7SKP289, Length 295 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP289-201ENST00000517244 SESN3P58005 492 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 APBA1Q02410 837 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 TNFAIP2Q03169 654 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 FPGSQ05932 587 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 SFSWAPQ12872 951 aaKnown RBP4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 SMC1AQ14683 1233 aaKnown RBP4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 TERF2Q15554 542 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 RAB30Q15771 203 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 ATP13A4Q4VNC1 1196 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 PPP1R26Q5T8A7 1209 aaPredicted RBP4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 NBPF12Q5TAG4 269 aaPredicted RBP4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 VPS53Q5VIR6 699 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 PEAR1Q5VY43 1037 aaPredicted RBP4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 CDCA2Q69YH5 1023 aaPredicted RBP4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 HEATR6Q6AI08 1181 aaKnown RBP4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 RETSATQ6NUM9 610 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 PGM2L1Q6PCE3 622 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 SASS6Q6UVJ0 657 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 CLEC17AQ6ZS10 378 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 C1orf122Q6ZSJ8 110 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 OTOP3Q7RTS5 596 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 BRAPQ7Z569 592 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 BMP8AQ7Z5Y6 402 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 NCAPG2Q86XI2 1143 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 CMTR2Q8IYT2 770 aaKnown RBP4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 TRMT2AQ8IZ69 625 aaKnown RBP4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 ZNF295-AS1Q8N0V1 137 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 CRACR2BQ8N4Y2 399 aaPredicted RBP4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 SLC35G2Q8TBE7 412 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 GRIN3AQ8TCU5 1115 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 USP13Q92995 863 aaPredicted RBP4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 FAXDC2Q96IV6 333 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 EIF2AK1Q9BQI3 630 aaKnown RBP4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 NAA15Q9BXJ9 866 aaKnown RBP4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 NYXQ9GZU5 481 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 ATP13A2Q9NQ11 1180 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 PDLIM7Q9NR12 457 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 LATS2Q9NRM7 1088 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 SMC4Q9NTJ3 1288 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 ARGLU1Q9NWB6 273 aaPredicted RBP4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 NSFL1CQ9UNZ2 370 aaKnown RBP4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 SRPK3Q9UPE1 567 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 DIS3Q9Y2L1 958 aaKnown RBP4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 YBX2Q9Y2T7 364 aaKnown RBP4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 TMEM98Q9Y2Y6 226 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 PCDHB5Q9Y5E4 795 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 VPS13AQ96RL7 3174 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 ASPMQ8IZT6 3477 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 TRIOO75962 3097 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 SPTBN2O15020 2390 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 CACNA1HO95180 2353 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 ZFYVE26Q68DK2 2539 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 ZNF462Q96JM2 2506 aa4.17□□□□□ -1.74
RN7SKP289-201ENST00000517244 NUP98P52948 1817 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 TEP1Q99973 2627 aaKnown RBP4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 KLHL33A6NCF5 533 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 A6NCN8 305 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 MEN1O00255 615 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 NOP56O00567 594 aaKnown RBP4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 PRODHO43272 600 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 PLOD3O60568 738 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 PQBP1O60828 265 aaKnown RBP4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 MT-CO1P00395 513 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 IFIT1P09914 478 aaKnown RBP4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 KCNA5P22460 613 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 OAS2P29728 719 aaKnown RBP4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 AVPR2P30518 371 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 ELF1P32519 619 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 TXLNAP40222 546 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 PIK3CAP42336 1068 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 LSSP48449 732 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 RGS3P49796 1198 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 RIPK4P57078 832 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 ZNF445P59923 1031 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 PPP2R2AP63151 447 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 PLIN5Q00G26 463 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 SLFN5Q08AF3 891 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 WASHC5Q12768 1159 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 G3BP1Q13283 466 aaKnown RBP eCLIP4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 VGLL4Q14135 290 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 SEPT7Q16181 437 aaKnown RBP4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 TAF12Q16514 161 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 HLFQ16534 295 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 SUPT20HL1Q3ZLR7 823 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 TRIM60Q495X7 471 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 MCTP2Q6DN12 878 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 SWSAP1Q6NVH7 229 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 FAM180BQ6P0A1 224 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 DARS2Q6PI48 645 aaKnown RBP4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 LRSAM1Q6UWE0 723 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 RFX8Q6ZV50 586 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 FASTKD5Q7L8L6 764 aaKnown RBP4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 NLRC3Q7RTR2 1065 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 MAMDC2Q7Z304 686 aaPredicted RBP4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 GSTCDQ8NEC7 633 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 SPATA18Q8TC71 538 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 KCNG4Q8TDN1 519 aa4.16□□□□□ -1.74
RN7SKP289-201ENST00000517244 IPO4Q8TEX9 1081 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms