RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 CASS4Q9NQ75 786 aa-0.28□□□□□ -2.45
SNORA40.16-201ENST00000517238 PPP4R2Q9NY27 417 aa-0.28□□□□□ -2.45
SNORA40.16-201ENST00000517238 PCDHB4Q9Y5E5 795 aa-0.28□□□□□ -2.45
SNORA40.16-201ENST00000517238 TCRBV5S2A0A599 114 aa-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 UBE2QL1A1L167 161 aa-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 C22orf46C9J442 243 aa-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 H0Y8X5 98 aa-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 NPHS1O60500 1241 aa-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 FOXH1O75593 365 aa-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 FOSP01100 380 aaPredicted RBP-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 THBDP07204 575 aa-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 RNF224P0DH78 156 aa-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 ADCY8P40145 1251 aa-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 IL6STP40189 918 aaPredicted RBP-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 ATP12AP54707 1039 aa-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 MXRA7P84157 204 aa-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 AAMPQ13685 434 aa-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 CAPRIN1Q14444 709 aaKnown RBP-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 KIZQ2M2Z5 673 aa-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 GPR149Q86SP6 731 aa-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 TEX2Q8IWB9 1127 aa-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 GJD3Q8N144 294 aa-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 FGFRL1Q8N441 504 aa-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 FBXL16Q8N461 479 aa-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 C16orf52Q8NHV5 167 aa-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 ZNF721Q8TF20 911 aa-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 DDRGK1Q96HY6 314 aa-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 ZNF512BQ96KM6 892 aaPredicted RBP-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 PCMTD1Q96MG8 357 aaPredicted RBP-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 FCRL3Q96P31 734 aaPredicted RBP-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 DCLRE1CQ96SD1 692 aaKnown RBP-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 UBXN6Q9BZV1 441 aa-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 BRINP2Q9C0B6 783 aa-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 HAPLN2Q9GZV7 340 aa-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 TCF7L2Q9NQB0 619 aa-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 BTG4Q9NY30 223 aa-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 PADI4Q9UM07 663 aa-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 MACF1Q9UPN3 7388 aaKnown RBP-0.29□□□□□ -2.46
SNORA40.16-201ENST00000517238 ATRXP46100 2492 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 USP17L15C9J2P7 530 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 USP17L10C9JJH3 530 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 USP17L13C9JLJ4 530 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 USP17L12C9JPN9 530 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 USP17L11C9JVI0 530 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 USP17L21D6R901 530 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 USP17L18D6R9N7 530 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 USP17L22D6RA61 530 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 USP17L17D6RBQ6 530 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 USP17L19D6RCP7 530 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 USP17L20D6RJB6 530 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 FBXO24O75426 580 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 CD3EP07766 207 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 CDC25AP30304 524 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 EIF1AXP47813 144 aaKnown RBP-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 ENTPD1P49961 510 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 USP17L24Q0WX57 530 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 ACAP1Q15027 740 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 SF1Q15637 639 aaKnown RBP-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 EEF1DP3Q658K8 133 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 PMS2CLQ68D20 193 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 RSRC2Q7L4I2 434 aaKnown RBP-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 SPATA2LQ8IUW3 424 aaPredicted RBP-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 ARL8AQ96BM9 186 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 RPL10LQ96L21 214 aaKnown RBP-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 WDR24Q96S15 920 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 AIFM2Q9BRQ8 373 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 CEP44Q9C0F1 390 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 RMI1Q9H9A7 625 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 ZNF556Q9HAH1 456 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 SCRT2Q9NQ03 307 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 HSPBP1Q9NZL4 362 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 KCNG2Q9UJ96 466 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 CDC42EP3Q9UKI2 254 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 ADAM21Q9UKJ8 722 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 NOVA2Q9UNW9 492 aaKnown RBP-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 MAP3K2Q9Y2U5 619 aa-0.3□□□□□ -2.46
SNORA40.16-201ENST00000517238 ANKRD17O75179 2603 aaKnown RBP-0.31□□□□□ -2.46
SNORA40.16-201ENST00000517238 CACNA1FO60840 1977 aa-0.31□□□□□ -2.46
SNORA40.16-201ENST00000517238 PRAMEF22A3QJZ6 481 aa-0.31□□□□□ -2.46
SNORA40.16-201ENST00000517238 C7orf72A4D263 438 aa-0.31□□□□□ -2.46
SNORA40.16-201ENST00000517238 GOLGA8BA8MQT2 603 aa-0.31□□□□□ -2.46
SNORA40.16-201ENST00000517238 CHURC1-FNTBB4DL54 471 aa-0.31□□□□□ -2.46
SNORA40.16-201ENST00000517238 E5RJQ4 531 aa-0.31□□□□□ -2.46
SNORA40.16-201ENST00000517238 MYO1BO43795 1136 aa-0.31□□□□□ -2.46
SNORA40.16-201ENST00000517238 UBOX5O94941 541 aa-0.31□□□□□ -2.46
SNORA40.16-201ENST00000517238 PAPSS2O95340 614 aaPredicted RBP-0.31□□□□□ -2.46
SNORA40.16-201ENST00000517238 HNRNPLP14866 589 aaKnown RBP eCLIP-0.31□□□□□ -2.46
SNORA40.16-201ENST00000517238 CEACAM8P31997 349 aaPredicted RBP-0.31□□□□□ -2.46
SNORA40.16-201ENST00000517238 GLIPR1P48060 266 aa-0.31□□□□□ -2.46
SNORA40.16-201ENST00000517238 KRTAP12-3P60328 96 aa-0.31□□□□□ -2.46
SNORA40.16-201ENST00000517238 ERVFC1-1P60608 527 aa-0.31□□□□□ -2.46
SNORA40.16-201ENST00000517238 ATP2C1P98194 919 aaPredicted RBP-0.31□□□□□ -2.46
SNORA40.16-201ENST00000517238 PFKPQ01813 784 aa-0.31□□□□□ -2.46
SNORA40.16-201ENST00000517238 POU5F1BQ06416 359 aa-0.31□□□□□ -2.46
SNORA40.16-201ENST00000517238 SCAPQ12770 1279 aa-0.31□□□□□ -2.46
SNORA40.16-201ENST00000517238 SEPT6Q14141 434 aa-0.31□□□□□ -2.46
SNORA40.16-201ENST00000517238 KRT72Q14CN4 511 aa-0.31□□□□□ -2.46
SNORA40.16-201ENST00000517238 DAZAP2Q15038 168 aaPredicted RBP-0.31□□□□□ -2.46
SNORA40.16-201ENST00000517238 IZUMO4Q1ZYL8 232 aa-0.31□□□□□ -2.46
SNORA40.16-201ENST00000517238 ZNF718Q3SXZ3 478 aa-0.31□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms