RNA–Protein interactions for RNA: ENST00000516911.1

RNU6-1258P-201, Transcript of RNA, U6 small nuclear 1258, pseudogene, humanhuman

BASIC

Gene RNU6-1258P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1258P-201ENST00000516911 POGKQ9P215 609 aa1.78□□□□□ -2.12
RNU6-1258P-201ENST00000516911 LRIT1Q9P2V4 623 aa1.78□□□□□ -2.12
RNU6-1258P-201ENST00000516911 EPN1Q9Y6I3 576 aaPredicted RBP1.78□□□□□ -2.12
RNU6-1258P-201ENST00000516911 SETD1BQ9UPS6 1966 aaKnown RBP1.78□□□□□ -2.13
RNU6-1258P-201ENST00000516911 DIRC3C9JPN6 131 aa1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 HOXA3O43365 443 aaPredicted RBP1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 ORC4O43929 436 aa1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 DNAJC6O75061 913 aa1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 MAFO75444 373 aaPredicted RBP1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 FSBPO95073 299 aa1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 FOSP01100 380 aaPredicted RBP1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 ATF4P18848 351 aaPredicted RBP1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 DDX6P26196 483 aaKnown RBP eCLIP1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 APOBEC3AP31941 199 aaPredicted RBP1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 BMPR1AP36894 532 aa1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 BCAR1P56945 870 aa1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 SLC6A3Q01959 620 aa1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 VPS72Q15906 364 aa1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 NTRK3Q16288 839 aa1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 LDLRAD1Q5T700 205 aa1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 MRM1Q6IN84 353 aaKnown RBP1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 ARMC6Q6NXE6 501 aa1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 CXorf67Q86X51 503 aaPredicted RBP1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 SLC44A3Q8N4M1 653 aa1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 CISD2Q8N5K1 135 aaKnown RBP1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 C2orf69Q8N8R5 385 aa1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 C9orf106Q8NAJ2 232 aa1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 CPEB3Q8NE35 698 aaKnown RBP1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 SPATA3Q8NHX4 192 aa1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 PCDH19Q8TAB3 1148 aa1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 TUBGCP5Q96RT8 1024 aa1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 FOXB1Q99853 325 aa1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 BUD13Q9BRD0 619 aaKnown RBP eCLIP1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 PDCD2LQ9BRP1 358 aa1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 KRTAP1-5Q9BYS1 174 aa1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 VPS33BQ9H267 617 aa1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 ZNF768Q9H5H4 540 aaKnown RBP1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 POLR3BQ9NW08 1133 aaPredicted RBP1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 DNAI1Q9UI46 699 aa1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 CBLCQ9ULV8 474 aa1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 NOX1Q9Y5S8 564 aa1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 POLR2AP24928 1970 aaKnown RBP1.77□□□□□ -2.13
RNU6-1258P-201ENST00000516911 WDR91A4D1P6 747 aa1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 UNC119BA6NIH7 251 aa1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 GRXCR1A8MXD5 290 aa1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 AHRRA9YTQ3 701 aa1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 ZNF561-AS1K7EIQ3 104 aa1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 WNT9AO14904 365 aa1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 KRT37O76014 449 aa1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 RBP3P10745 1247 aa1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 ITGAMP11215 1152 aa1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 MGAT1P26572 445 aa1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 TKTP29401 623 aaKnown RBP1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 SDHAP31040 664 aa1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 PTGER1P34995 402 aa1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 RNASE9P60153 205 aaKnown RBP1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 SUMO1P63165 101 aaKnown RBP1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 LACTBP83111 547 aaPredicted RBP1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 FOXF2Q12947 444 aa1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 FOXI1Q12951 378 aa1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 EZH2Q15910 746 aaKnown RBP1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 TTC38Q5R3I4 469 aa1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 PRAMEF9Q5VWM5 478 aa1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 C1QL3Q5VWW1 255 aa1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 SLFN12LQ6IEE8 588 aa1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 TIGD7Q6NT04 549 aaPredicted RBP1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 EFCAB12Q6NXP0 572 aa1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 CLEC14AQ86T13 490 aa1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 NME9Q86XW9 330 aa1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 OR5AN1Q8NGI8 311 aa1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 LINC00476Q8WZB0 136 aa1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 OSBP2Q969R2 916 aa1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 MAML3Q96JK9 1138 aa1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 ZNF778Q96MU6 729 aa1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 TGIF2Q9GZN2 237 aa1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 SYBUQ9NX95 663 aa1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 SLC17A6Q9P2U8 582 aa1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 WDR3Q9UNX4 943 aaKnown RBP eCLIP1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 DMTF1Q9Y222 760 aa1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 PCDHA9Q9Y5H5 950 aa1.76□□□□□ -2.13
RNU6-1258P-201ENST00000516911 ASXL2Q76L83 1435 aa1.75□□□□□ -2.13
RNU6-1258P-201ENST00000516911 TRBV23-1A0A0A0MS06 115 aa1.75□□□□□ -2.13
RNU6-1258P-201ENST00000516911 UBA6A0AVT1 1052 aaPredicted RBP1.75□□□□□ -2.13
RNU6-1258P-201ENST00000516911 ZNF185O15231 689 aa1.75□□□□□ -2.13
RNU6-1258P-201ENST00000516911 MTSS1O43312 755 aa1.75□□□□□ -2.13
RNU6-1258P-201ENST00000516911 PROP1O75360 226 aa1.75□□□□□ -2.13
RNU6-1258P-201ENST00000516911 RBMXL2O75526 392 aaKnown RBP1.75□□□□□ -2.13
RNU6-1258P-201ENST00000516911 STC2O76061 302 aa1.75□□□□□ -2.13
RNU6-1258P-201ENST00000516911 APOL3O95236 402 aa1.75□□□□□ -2.13
RNU6-1258P-201ENST00000516911 CAPNS1P04632 268 aa1.75□□□□□ -2.13
RNU6-1258P-201ENST00000516911 IGKV2-30P06310 120 aa1.75□□□□□ -2.13
RNU6-1258P-201ENST00000516911 FDXRP22570 491 aa1.75□□□□□ -2.13
RNU6-1258P-201ENST00000516911 XPAP23025 273 aaPredicted RBP1.75□□□□□ -2.13
RNU6-1258P-201ENST00000516911 ETFBP38117 255 aa1.75□□□□□ -2.13
RNU6-1258P-201ENST00000516911 RARRES1P49788 294 aa1.75□□□□□ -2.13
RNU6-1258P-201ENST00000516911 RGS3P49796 1198 aa1.75□□□□□ -2.13
RNU6-1258P-201ENST00000516911 CCT4P50991 539 aaKnown RBP1.75□□□□□ -2.13
RNU6-1258P-201ENST00000516911 WNT3AP56704 352 aa1.75□□□□□ -2.13
RNU6-1258P-201ENST00000516911 ANTXR2P58335 489 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms