RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 CNNM4Q6P4Q7 775 aa4.16□□□□□ -1.74
RNU6-1088P-201ENST00000516850 Q6ZRM9 215 aa4.16□□□□□ -1.74
RNU6-1088P-201ENST00000516850 ESPNLQ6ZVH7 1005 aa4.16□□□□□ -1.74
RNU6-1088P-201ENST00000516850 KANSL1Q7Z3B3 1105 aa4.16□□□□□ -1.74
RNU6-1088P-201ENST00000516850 MRGPRGQ86SM5 289 aa4.16□□□□□ -1.74
RNU6-1088P-201ENST00000516850 ELOA2Q8IYF1 753 aaPredicted RBP4.16□□□□□ -1.74
RNU6-1088P-201ENST00000516850 AHI1Q8N157 1196 aa4.16□□□□□ -1.74
RNU6-1088P-201ENST00000516850 SYNE4Q8N205 404 aa4.16□□□□□ -1.74
RNU6-1088P-201ENST00000516850 MB21D1Q8N884 522 aa4.16□□□□□ -1.74
RNU6-1088P-201ENST00000516850 ZNF512Q96ME7 567 aaPredicted RBP4.16□□□□□ -1.74
RNU6-1088P-201ENST00000516850 FAM193BQ96PV7 902 aaPredicted RBP4.16□□□□□ -1.74
RNU6-1088P-201ENST00000516850 KRTAP9-8Q9BYQ0 159 aa4.16□□□□□ -1.74
RNU6-1088P-201ENST00000516850 PITHD1Q9GZP4 211 aaPredicted RBP4.16□□□□□ -1.74
RNU6-1088P-201ENST00000516850 POFUT1Q9H488 388 aa4.16□□□□□ -1.74
RNU6-1088P-201ENST00000516850 KCNG1Q9UIX4 513 aa4.16□□□□□ -1.74
RNU6-1088P-201ENST00000516850 MYPNQ86TC9 1320 aa4.16□□□□□ -1.74
RNU6-1088P-201ENST00000516850 MTSS1O43312 755 aa4.15□□□□□ -1.75
RNU6-1088P-201ENST00000516850 RAMP2O60895 175 aa4.15□□□□□ -1.75
RNU6-1088P-201ENST00000516850 PPFIA4O75335 1185 aa4.15□□□□□ -1.75
RNU6-1088P-201ENST00000516850 PCDH8O95206 1070 aa4.15□□□□□ -1.75
RNU6-1088P-201ENST00000516850 F2P00734 622 aa4.15□□□□□ -1.75
RNU6-1088P-201ENST00000516850 ATP2A2P16615 1042 aaKnown RBP4.15□□□□□ -1.75
RNU6-1088P-201ENST00000516850 SCNN1BP51168 640 aa4.15□□□□□ -1.75
RNU6-1088P-201ENST00000516850 INHBEP58166 350 aa4.15□□□□□ -1.75
RNU6-1088P-201ENST00000516850 ADAM8P78325 824 aa4.15□□□□□ -1.75
RNU6-1088P-201ENST00000516850 OCRLQ01968 901 aa4.15□□□□□ -1.75
RNU6-1088P-201ENST00000516850 SPIDRQ14159 915 aa4.15□□□□□ -1.75
RNU6-1088P-201ENST00000516850 FNDC7Q5VTL7 733 aa4.15□□□□□ -1.75
RNU6-1088P-201ENST00000516850 ESRP1Q6NXG1 681 aaKnown RBP4.15□□□□□ -1.75
RNU6-1088P-201ENST00000516850 NXPE1Q8N323 547 aa4.15□□□□□ -1.75
RNU6-1088P-201ENST00000516850 EFHBQ8N7U6 833 aa4.15□□□□□ -1.75
RNU6-1088P-201ENST00000516850 ST8SIA2Q92186 375 aa4.15□□□□□ -1.75
RNU6-1088P-201ENST00000516850 LARP4BQ92615 738 aaKnown RBP4.15□□□□□ -1.75
RNU6-1088P-201ENST00000516850 APPBP2Q92624 585 aa4.15□□□□□ -1.75
RNU6-1088P-201ENST00000516850 HAS1Q92839 578 aa4.15□□□□□ -1.75
RNU6-1088P-201ENST00000516850 PGBD4Q96DM1 585 aa4.15□□□□□ -1.75
RNU6-1088P-201ENST00000516850 MNTQ99583 582 aa4.15□□□□□ -1.75
RNU6-1088P-201ENST00000516850 ORAI3Q9BRQ5 295 aa4.15□□□□□ -1.75
RNU6-1088P-201ENST00000516850 HAPLN2Q9GZV7 340 aa4.15□□□□□ -1.75
RNU6-1088P-201ENST00000516850 IKZF4Q9H2S9 585 aa4.15□□□□□ -1.75
RNU6-1088P-201ENST00000516850 NRDE2Q9H7Z3 1164 aa4.15□□□□□ -1.75
RNU6-1088P-201ENST00000516850 KANSL2Q9H9L4 492 aa4.15□□□□□ -1.75
RNU6-1088P-201ENST00000516850 THG1LQ9NWX6 298 aaKnown RBP4.15□□□□□ -1.75
RNU6-1088P-201ENST00000516850 USP36Q9P275 1121 aaKnown RBP4.15□□□□□ -1.75
RNU6-1088P-201ENST00000516850 NRP2O60462 931 aa4.14□□□□□ -1.75
RNU6-1088P-201ENST00000516850 FAM20BO75063 409 aa4.14□□□□□ -1.75
RNU6-1088P-201ENST00000516850 PPFIA2O75334 1257 aa4.14□□□□□ -1.75
RNU6-1088P-201ENST00000516850 RECQL4O94761 1208 aa4.14□□□□□ -1.75
RNU6-1088P-201ENST00000516850 LRRC32Q14392 662 aa4.14□□□□□ -1.75
RNU6-1088P-201ENST00000516850 C21orf62-AS1Q17RA5 79 aa4.14□□□□□ -1.75
RNU6-1088P-201ENST00000516850 RABL3Q5HYI8 236 aa4.14□□□□□ -1.75
RNU6-1088P-201ENST00000516850 UNQ6494/PRO21346Q6UXR6 183 aa4.14□□□□□ -1.75
RNU6-1088P-201ENST00000516850 C16orf86Q6ZW13 317 aa4.14□□□□□ -1.75
RNU6-1088P-201ENST00000516850 LRRTM3Q86VH5 581 aa4.14□□□□□ -1.75
RNU6-1088P-201ENST00000516850 CDYL2Q8N8U2 506 aa4.14□□□□□ -1.75
RNU6-1088P-201ENST00000516850 MDGA1Q8NFP4 955 aa4.14□□□□□ -1.75
RNU6-1088P-201ENST00000516850 OR5M3Q8NGP4 307 aa4.14□□□□□ -1.75
RNU6-1088P-201ENST00000516850 SLC25A43Q8WUT9 341 aaPredicted RBP4.14□□□□□ -1.75
RNU6-1088P-201ENST00000516850 CHTF18Q8WVB6 975 aa4.14□□□□□ -1.75
RNU6-1088P-201ENST00000516850 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.14□□□□□ -1.75
RNU6-1088P-201ENST00000516850 H2AFY2Q9P0M6 372 aaPredicted RBP4.14□□□□□ -1.75
RNU6-1088P-201ENST00000516850 MSRAQ9UJ68 235 aa4.14□□□□□ -1.75
RNU6-1088P-201ENST00000516850 USP18Q9UMW8 372 aa4.14□□□□□ -1.75
RNU6-1088P-201ENST00000516850 HDAC5Q9UQL6 1122 aa4.14□□□□□ -1.75
RNU6-1088P-201ENST00000516850 PCDHB6Q9Y5E3 794 aa4.14□□□□□ -1.75
RNU6-1088P-201ENST00000516850 CD2APQ9Y5K6 639 aa4.14□□□□□ -1.75
RNU6-1088P-201ENST00000516850 RAB11FIP3O75154 756 aa4.13□□□□□ -1.75
RNU6-1088P-201ENST00000516850 GAAP10253 952 aa4.13□□□□□ -1.75
RNU6-1088P-201ENST00000516850 LSP1P33241 339 aa4.13□□□□□ -1.75
RNU6-1088P-201ENST00000516850 NRG3P56975 720 aa4.13□□□□□ -1.75
RNU6-1088P-201ENST00000516850 LMBR1LQ6UX01 489 aa4.13□□□□□ -1.75
RNU6-1088P-201ENST00000516850 APBB1IPQ7Z5R6 666 aaPredicted RBP4.13□□□□□ -1.75
RNU6-1088P-201ENST00000516850 FAM83AQ86UY5 434 aa4.13□□□□□ -1.75
RNU6-1088P-201ENST00000516850 C11orf74Q86VG3 221 aa4.13□□□□□ -1.75
RNU6-1088P-201ENST00000516850 ULK2Q8IYT8 1036 aa4.13□□□□□ -1.75
RNU6-1088P-201ENST00000516850 UNC5BQ8IZJ1 945 aa4.13□□□□□ -1.75
RNU6-1088P-201ENST00000516850 PPM1KQ8N3J5 372 aa4.13□□□□□ -1.75
RNU6-1088P-201ENST00000516850 ZNF276Q8N554 614 aa4.13□□□□□ -1.75
RNU6-1088P-201ENST00000516850 NINJ1Q92982 152 aa4.13□□□□□ -1.75
RNU6-1088P-201ENST00000516850 GPR101Q96P66 508 aaPredicted RBP4.13□□□□□ -1.75
RNU6-1088P-201ENST00000516850 CPPED1Q9BRF8 314 aaPredicted RBP4.13□□□□□ -1.75
RNU6-1088P-201ENST00000516850 TTPALQ9BTX7 342 aa4.13□□□□□ -1.75
RNU6-1088P-201ENST00000516850 ZMAT4Q9H898 229 aa4.13□□□□□ -1.75
RNU6-1088P-201ENST00000516850 ING3Q9NXR8 418 aa4.13□□□□□ -1.75
RNU6-1088P-201ENST00000516850 ZNF891A8MT65 544 aaPredicted RBP4.12□□□□□ -1.75
RNU6-1088P-201ENST00000516850 HOXA3O43365 443 aaPredicted RBP4.12□□□□□ -1.75
RNU6-1088P-201ENST00000516850 ALDH1A2O94788 518 aa4.12□□□□□ -1.75
RNU6-1088P-201ENST00000516850 HK1P19367 917 aa4.12□□□□□ -1.75
RNU6-1088P-201ENST00000516850 POU3F2P20265 443 aaPredicted RBP4.12□□□□□ -1.75
RNU6-1088P-201ENST00000516850 GPR15P49685 360 aa4.12□□□□□ -1.75
RNU6-1088P-201ENST00000516850 RABGGTBP53611 331 aa4.12□□□□□ -1.75
RNU6-1088P-201ENST00000516850 IL2P60568 153 aa4.12□□□□□ -1.75
RNU6-1088P-201ENST00000516850 SLC25A3Q00325 362 aa4.12□□□□□ -1.75
RNU6-1088P-201ENST00000516850 DSG1Q02413 1049 aa4.12□□□□□ -1.75
RNU6-1088P-201ENST00000516850 TOB2Q14106 344 aaPredicted RBP4.12□□□□□ -1.75
RNU6-1088P-201ENST00000516850 PTPAQ15257 358 aa4.12□□□□□ -1.75
RNU6-1088P-201ENST00000516850 DCAF17Q5H9S7 520 aaPredicted RBP4.12□□□□□ -1.75
RNU6-1088P-201ENST00000516850 CREB3L3Q68CJ9 461 aa4.12□□□□□ -1.75
RNU6-1088P-201ENST00000516850 LAIR1Q6GTX8 287 aa4.12□□□□□ -1.75
RNU6-1088P-201ENST00000516850 NPM2Q86SE8 214 aaKnown RBP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms