RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 PGBD4Q96DM1 585 aa12.43□□□□□ -0.42
SCARNA16.1-201ENST00000516133 AK8Q96MA6 479 aa12.43□□□□□ -0.42
SCARNA16.1-201ENST00000516133 POLR3FQ9H1D9 316 aaPredicted RBP12.43□□□□□ -0.42
SCARNA16.1-201ENST00000516133 BHMT2Q9H2M3 363 aa12.43□□□□□ -0.42
SCARNA16.1-201ENST00000516133 MINDY3Q9H8M7 445 aa12.43□□□□□ -0.42
SCARNA16.1-201ENST00000516133 DDX19AQ9NUU7 478 aaKnown RBP12.43□□□□□ -0.42
SCARNA16.1-201ENST00000516133 TYW1Q9NV66 732 aaKnown RBP12.43□□□□□ -0.42
SCARNA16.1-201ENST00000516133 THEGQ9P2T0 379 aa12.43□□□□□ -0.42
SCARNA16.1-201ENST00000516133 COG5Q9UP83 839 aa12.43□□□□□ -0.42
SCARNA16.1-201ENST00000516133 PLAGL2Q9UPG8 496 aa12.43□□□□□ -0.42
SCARNA16.1-201ENST00000516133 VWA3AA6NCI4 1184 aa12.42□□□□□ -0.42
SCARNA16.1-201ENST00000516133 INO80B-WBP1J3KQ70 363 aa12.42□□□□□ -0.42
SCARNA16.1-201ENST00000516133 CDC25AP30304 524 aa12.42□□□□□ -0.42
SCARNA16.1-201ENST00000516133 HOXA11P31270 313 aaPredicted RBP12.42□□□□□ -0.42
SCARNA16.1-201ENST00000516133 CAPSQ13938 189 aa12.42□□□□□ -0.42
SCARNA16.1-201ENST00000516133 PPP2R5AQ15172 486 aa12.42□□□□□ -0.42
SCARNA16.1-201ENST00000516133 TIGD5Q53EQ6 642 aa12.42□□□□□ -0.42
SCARNA16.1-201ENST00000516133 MAEAQ7L5Y9 396 aa12.42□□□□□ -0.42
SCARNA16.1-201ENST00000516133 HSCBQ8IWL3 235 aa12.42□□□□□ -0.42
SCARNA16.1-201ENST00000516133 CNNM3Q8NE01 707 aa12.42□□□□□ -0.42
SCARNA16.1-201ENST00000516133 CCDC51Q96ER9 411 aa12.42□□□□□ -0.42
SCARNA16.1-201ENST00000516133 CASD1Q96PB1 797 aa12.42□□□□□ -0.42
SCARNA16.1-201ENST00000516133 NT5C3AQ9H0P0 336 aa12.42□□□□□ -0.42
SCARNA16.1-201ENST00000516133 FAM105AQ9NUU6 356 aa12.42□□□□□ -0.42
SCARNA16.1-201ENST00000516133 DAXXQ9UER7 740 aaPredicted RBP12.42□□□□□ -0.42
SCARNA16.1-201ENST00000516133 PCDHB2Q9Y5E7 798 aa12.42□□□□□ -0.42
SCARNA16.1-201ENST00000516133 BDP1A6H8Y1 2624 aa12.41□□□□□ -0.42
SCARNA16.1-201ENST00000516133 CARNS1A5YM72 827 aa12.41□□□□□ -0.42
SCARNA16.1-201ENST00000516133 PP2D1A8MPX8 630 aa12.41□□□□□ -0.42
SCARNA16.1-201ENST00000516133 GRM6O15303 877 aa12.41□□□□□ -0.42
SCARNA16.1-201ENST00000516133 SLC26A4O43511 780 aa12.41□□□□□ -0.42
SCARNA16.1-201ENST00000516133 EYA4O95677 639 aa12.41□□□□□ -0.42
SCARNA16.1-201ENST00000516133 HSP90AA1P07900 732 aaKnown RBP12.41□□□□□ -0.42
SCARNA16.1-201ENST00000516133 LAG3P18627 525 aa12.41□□□□□ -0.42
SCARNA16.1-201ENST00000516133 MRPS5P82675 430 aaKnown RBP12.41□□□□□ -0.42
SCARNA16.1-201ENST00000516133 MBTD1Q05BQ5 628 aa12.41□□□□□ -0.42
SCARNA16.1-201ENST00000516133 NOTUMQ6P988 496 aa12.41□□□□□ -0.42
SCARNA16.1-201ENST00000516133 GLB1LQ6UWU2 654 aa12.41□□□□□ -0.42
SCARNA16.1-201ENST00000516133 MRPL10Q7Z7H8 261 aaKnown RBP12.41□□□□□ -0.42
SCARNA16.1-201ENST00000516133 ZBTB8OSQ8IWT0 167 aa12.41□□□□□ -0.42
SCARNA16.1-201ENST00000516133 LRRC43Q8N309 656 aa12.41□□□□□ -0.42
SCARNA16.1-201ENST00000516133 KLHL23Q8NBE8 558 aa12.41□□□□□ -0.42
SCARNA16.1-201ENST00000516133 SPPL3Q8TCT6 385 aa12.41□□□□□ -0.42
SCARNA16.1-201ENST00000516133 KIFAP3Q92845 792 aa12.41□□□□□ -0.42
SCARNA16.1-201ENST00000516133 HLA-CQ95604 372 aa12.41□□□□□ -0.42
SCARNA16.1-201ENST00000516133 IFT74Q96LB3 600 aa12.41□□□□□ -0.42
SCARNA16.1-201ENST00000516133 MMTAG2Q9BU76 263 aaKnown RBP12.41□□□□□ -0.42
SCARNA16.1-201ENST00000516133 MRPL9Q9BYD2 267 aaKnown RBP12.41□□□□□ -0.42
SCARNA16.1-201ENST00000516133 C2orf40Q9H1Z8 148 aa12.41□□□□□ -0.42
SCARNA16.1-201ENST00000516133 ZSCAN16Q9H4T2 348 aaPredicted RBP12.41□□□□□ -0.42
SCARNA16.1-201ENST00000516133 ALG13Q9NP73 1137 aaKnown RBP12.41□□□□□ -0.42
SCARNA16.1-201ENST00000516133 UBN1Q9NPG3 1134 aa12.41□□□□□ -0.42
SCARNA16.1-201ENST00000516133 GPRC5CQ9NQ84 441 aa12.41□□□□□ -0.42
SCARNA16.1-201ENST00000516133 PRDM6Q9NQX0 595 aa12.41□□□□□ -0.42
SCARNA16.1-201ENST00000516133 RNF19AQ9NV58 838 aa12.41□□□□□ -0.42
SCARNA16.1-201ENST00000516133 KCNG1Q9UIX4 513 aa12.41□□□□□ -0.42
SCARNA16.1-201ENST00000516133 REV3LO60673 3130 aa12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 VCANP13611 3396 aa12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 LRRIQ4A6NIV6 560 aa12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 E9PMD0 336 aa12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 NCK2O43639 380 aa12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 STX6O43752 255 aa12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 TSPAN1O60635 241 aa12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 ITGB1P05556 798 aa12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 ATF7P17544 494 aaPredicted RBP12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 LONP1P36776 959 aaKnown RBP12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 UBA7P41226 1012 aa12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 NAMPTP43490 491 aa12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 EFNA5P52803 228 aa12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 UBE3AQ05086 875 aa12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 SF3A1Q15459 793 aaKnown RBP12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 ZRSR1Q15695 479 aaKnown RBP12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 TJAP1Q5JTD0 557 aa12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 CLLU1OSQ5K130 101 aa12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 HYIQ5T013 277 aa12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 LRRC55Q6ZSA7 311 aa12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 HELQQ8TDG4 1101 aa12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 SYMPKQ92797 1274 aaKnown RBP12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 PPP2R3CQ969Q6 453 aa12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 CDK5RAP3Q96JB5 506 aa12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 PRIMPOLQ96LW4 560 aa12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 ASB2Q96Q27 587 aa12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 CSRNP2Q9H175 543 aa12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 NSUN3Q9H649 340 aaKnown RBP12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 CWH43Q9H720 699 aa12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 FOXD4L1Q9NU39 408 aa12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 PRMT7Q9NVM4 692 aaPredicted RBP12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 PUF60Q9UHX1 559 aaKnown RBP12.4□□□□□ -0.42
SCARNA16.1-201ENST00000516133 SPTBN5Q9NRC6 3674 aaKnown RBP12.4□□□□□ -0.43
SCARNA16.1-201ENST00000516133 CNTNAP2Q9UHC6 1331 aa12.39□□□□□ -0.43
SCARNA16.1-201ENST00000516133 A0A1B0GUA9 196 aa12.39□□□□□ -0.43
SCARNA16.1-201ENST00000516133 OFD1O75665 1012 aa12.39□□□□□ -0.43
SCARNA16.1-201ENST00000516133 FGF18O76093 207 aa12.39□□□□□ -0.43
SCARNA16.1-201ENST00000516133 NCLP19338 710 aaKnown RBP12.39□□□□□ -0.43
SCARNA16.1-201ENST00000516133 PPM1AP35813 382 aa12.39□□□□□ -0.43
SCARNA16.1-201ENST00000516133 ALDH7A1P49419 539 aaKnown RBP12.39□□□□□ -0.43
SCARNA16.1-201ENST00000516133 KRT17Q04695 432 aa12.39□□□□□ -0.43
SCARNA16.1-201ENST00000516133 MAPK6Q16659 721 aa12.39□□□□□ -0.43
SCARNA16.1-201ENST00000516133 AMHR2Q16671 573 aa12.39□□□□□ -0.43
SCARNA16.1-201ENST00000516133 FAM187BQ17R55 369 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms