RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 LSM14BQ9BX40 385 aaKnown RBP21.98■■□□□ 1.11
TRIO-223ENST00000515710 NUCKS1Q9H1E3 243 aaKnown RBP21.98■■□□□ 1.11
TRIO-223ENST00000515710 PCIF1Q9H4Z3 704 aa21.98■■□□□ 1.11
TRIO-223ENST00000515710 CEP72Q9P209 647 aa21.98■■□□□ 1.11
TRIO-223ENST00000515710 IGKV6-21A0A0C4DH24 114 aa21.98■■□□□ 1.11
TRIO-223ENST00000515710 GOLGA6L9A6NEM1 432 aa21.98■■□□□ 1.11
TRIO-223ENST00000515710 PPFIA4O75335 1185 aa21.98■■□□□ 1.11
TRIO-223ENST00000515710 TUBB4AP04350 444 aa21.98■■□□□ 1.11
TRIO-223ENST00000515710 HNRNPH3P31942 346 aaKnown RBP21.98■■□□□ 1.11
TRIO-223ENST00000515710 CDK17Q00537 523 aa21.98■■□□□ 1.11
TRIO-223ENST00000515710 BFSP1Q12934 665 aa21.98■■□□□ 1.11
TRIO-223ENST00000515710 NYAP1Q6ZVC0 841 aa21.98■■□□□ 1.11
TRIO-223ENST00000515710 DEPTORQ8TB45 409 aa21.98■■□□□ 1.11
TRIO-223ENST00000515710 PLCB1Q9NQ66 1216 aa21.98■■□□□ 1.11
TRIO-223ENST00000515710 ZHX1Q9UKY1 873 aaPredicted RBP21.98■■□□□ 1.11
TRIO-223ENST00000515710 TRPC6Q9Y210 931 aa21.98■■□□□ 1.11
TRIO-223ENST00000515710 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.97■■□□□ 1.11
TRIO-223ENST00000515710 ANKRD63C9JTQ0 380 aa21.97■■□□□ 1.11
TRIO-223ENST00000515710 KIF2AO00139 706 aaPredicted RBP21.97■■□□□ 1.11
TRIO-223ENST00000515710 LGALS2P05162 132 aa21.97■■□□□ 1.11
TRIO-223ENST00000515710 SMPD1P17405 629 aa21.97■■□□□ 1.11
TRIO-223ENST00000515710 STRN3Q13033 797 aa21.97■■□□□ 1.11
TRIO-223ENST00000515710 EXOC3L4Q17RC7 722 aa21.97■■□□□ 1.11
TRIO-223ENST00000515710 ZNF484Q5JVG2 852 aa21.97■■□□□ 1.11
TRIO-223ENST00000515710 GJC2Q5T442 439 aaPredicted RBP21.97■■□□□ 1.11
TRIO-223ENST00000515710 WDR59Q6PJI9 974 aa21.97■■□□□ 1.11
TRIO-223ENST00000515710 GBP6Q6ZN66 633 aa21.97■■□□□ 1.11
TRIO-223ENST00000515710 TOGARAM2Q6ZUX3 1019 aa21.97■■□□□ 1.11
TRIO-223ENST00000515710 CACNA2D4Q7Z3S7 1137 aa21.97■■□□□ 1.11
TRIO-223ENST00000515710 AFG1LQ8WV93 481 aa21.97■■□□□ 1.11
TRIO-223ENST00000515710 SOCS4Q8WXH5 440 aa21.97■■□□□ 1.11
TRIO-223ENST00000515710 C16orf45Q96MC5 204 aaPredicted RBP21.97■■□□□ 1.11
TRIO-223ENST00000515710 TMEM134Q9H6X4 195 aa21.97■■□□□ 1.11
TRIO-223ENST00000515710 PLAGL2Q9UPG8 496 aa21.97■■□□□ 1.11
TRIO-223ENST00000515710 ZBTB42B2RXF5 422 aa21.96■■□□□ 1.11
TRIO-223ENST00000515710 TISP43B9A030 160 aa21.96■■□□□ 1.11
TRIO-223ENST00000515710 EPHB6O15197 1021 aa21.96■■□□□ 1.11
TRIO-223ENST00000515710 CA12O43570 354 aa21.96■■□□□ 1.11
TRIO-223ENST00000515710 TNNT1P13805 278 aa21.96■■□□□ 1.11
TRIO-223ENST00000515710 GARTP22102 1010 aa21.96■■□□□ 1.11
TRIO-223ENST00000515710 MCCD1P59942 119 aaPredicted RBP21.96■■□□□ 1.11
TRIO-223ENST00000515710 CRHR2Q13324 411 aa21.96■■□□□ 1.11
TRIO-223ENST00000515710 REXO1L1PQ8IX06 675 aa21.96■■□□□ 1.11
TRIO-223ENST00000515710 CRACR2AQ9BSW2 395 aa21.96■■□□□ 1.11
TRIO-223ENST00000515710 LRRIQ4A6NIV6 560 aa21.96■■□□□ 1.11
TRIO-223ENST00000515710 NOL4O94818 638 aa21.96■■□□□ 1.11
TRIO-223ENST00000515710 CCDC175P0C221 793 aa21.96■■□□□ 1.11
TRIO-223ENST00000515710 RGS2P41220 211 aa21.96■■□□□ 1.11
TRIO-223ENST00000515710 MXD4Q14582 209 aaPredicted RBP21.96■■□□□ 1.11
TRIO-223ENST00000515710 MTF1Q14872 753 aa21.96■■□□□ 1.11
TRIO-223ENST00000515710 TAS1R3Q7RTX0 852 aa21.96■■□□□ 1.11
TRIO-223ENST00000515710 RDH13Q8NBN7 331 aa21.96■■□□□ 1.11
TRIO-223ENST00000515710 BAP1Q92560 729 aa21.96■■□□□ 1.11
TRIO-223ENST00000515710 CHP1Q99653 195 aa21.96■■□□□ 1.11
TRIO-223ENST00000515710 ADGRG1Q9Y653 693 aa21.96■■□□□ 1.11
TRIO-223ENST00000515710 K7ERI5 159 aa21.95■■□□□ 1.1
TRIO-223ENST00000515710 ADSSP30520 456 aa21.95■■□□□ 1.1
TRIO-223ENST00000515710 OLFML2BQ68BL8 750 aa21.95■■□□□ 1.1
TRIO-223ENST00000515710 OR6J1Q8NGC5 347 aa21.95■■□□□ 1.1
TRIO-223ENST00000515710 PSPC1Q8WXF1 523 aaKnown RBP21.95■■□□□ 1.1
TRIO-223ENST00000515710 ALDH1A1P00352 501 aa21.94■■□□□ 1.1
TRIO-223ENST00000515710 PIGRP01833 764 aa21.94■■□□□ 1.1
TRIO-223ENST00000515710 HOXD8P13378 290 aaPredicted RBP21.94■■□□□ 1.1
TRIO-223ENST00000515710 PON1P27169 355 aa21.94■■□□□ 1.1
TRIO-223ENST00000515710 FMO5P49326 533 aa21.94■■□□□ 1.1
TRIO-223ENST00000515710 VAMP7P51809 220 aa21.94■■□□□ 1.1
TRIO-223ENST00000515710 TNFAIP2Q03169 654 aa21.94■■□□□ 1.1
TRIO-223ENST00000515710 PDXDC1Q6P996 788 aa21.94■■□□□ 1.1
TRIO-223ENST00000515710 RRAGAQ7L523 313 aa21.94■■□□□ 1.1
TRIO-223ENST00000515710 CCDC170Q8IYT3 715 aa21.94■■□□□ 1.1
TRIO-223ENST00000515710 PRPF31Q8WWY3 499 aaKnown RBP21.94■■□□□ 1.1
TRIO-223ENST00000515710 SYN2Q92777 582 aaPredicted RBP21.94■■□□□ 1.1
TRIO-223ENST00000515710 BICD1Q96G01 975 aa21.94■■□□□ 1.1
TRIO-223ENST00000515710 RNPEPQ9H4A4 650 aa21.94■■□□□ 1.1
TRIO-223ENST00000515710 GJD2Q9UKL4 321 aa21.94■■□□□ 1.1
TRIO-223ENST00000515710 ZNF215Q9UL58 517 aaPredicted RBP21.94■■□□□ 1.1
TRIO-223ENST00000515710 PHLPP2Q6ZVD8 1323 aa21.94■■□□□ 1.1
TRIO-223ENST00000515710 TNPO2O14787 897 aaKnown RBP21.94■■□□□ 1.1
TRIO-223ENST00000515710 HNRNPDLO14979 420 aaKnown RBP21.94■■□□□ 1.1
TRIO-223ENST00000515710 KIAA0391O15091 583 aaKnown RBP21.94■■□□□ 1.1
TRIO-223ENST00000515710 ADCY3O60266 1144 aa21.94■■□□□ 1.1
TRIO-223ENST00000515710 TOMM70O94826 608 aa21.94■■□□□ 1.1
TRIO-223ENST00000515710 CAPSQ13938 189 aa21.94■■□□□ 1.1
TRIO-223ENST00000515710 SLC39A4Q6P5W5 647 aa21.94■■□□□ 1.1
TRIO-223ENST00000515710 POMGNT1Q8WZA1 660 aa21.94■■□□□ 1.1
TRIO-223ENST00000515710 GANQ9H2C0 597 aa21.94■■□□□ 1.1
TRIO-223ENST00000515710 SUGCTQ9HAC7 445 aa21.94■■□□□ 1.1
TRIO-223ENST00000515710 EPN1Q9Y6I3 576 aaPredicted RBP21.94■■□□□ 1.1
TRIO-223ENST00000515710 COL1A2P08123 1366 aa21.93■■□□□ 1.1
TRIO-223ENST00000515710 N4BP1O75113 896 aaKnown RBP21.93■■□□□ 1.1
TRIO-223ENST00000515710 SLC9A1P19634 815 aa21.93■■□□□ 1.1
TRIO-223ENST00000515710 CYLC1P35663 651 aaPredicted RBP21.93■■□□□ 1.1
TRIO-223ENST00000515710 LIG4P49917 911 aa21.93■■□□□ 1.1
TRIO-223ENST00000515710 EFNA5P52803 228 aa21.93■■□□□ 1.1
TRIO-223ENST00000515710 POLR2FP61218 127 aaKnown RBP21.93■■□□□ 1.1
TRIO-223ENST00000515710 ENPEPQ07075 957 aa21.93■■□□□ 1.1
TRIO-223ENST00000515710 FBXL18Q96ME1 805 aa21.93■■□□□ 1.1
TRIO-223ENST00000515710 APBA2Q99767 749 aa21.93■■□□□ 1.1
TRIO-223ENST00000515710 C16orf70Q9BSU1 422 aa21.93■■□□□ 1.1
TRIO-223ENST00000515710 FBXL5Q9UKA1 691 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms