RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 AAASQ9NRG9 546 aa14.18□□□□□ -0.14
CLCN3-210ENST00000515420 DDX19AQ9NUU7 478 aaKnown RBP14.18□□□□□ -0.14
CLCN3-210ENST00000515420 KIAA1024Q9UPX6 916 aa14.18□□□□□ -0.14
CLCN3-210ENST00000515420 DNM3Q9UQ16 869 aa14.18□□□□□ -0.14
CLCN3-210ENST00000515420 MORC2Q9Y6X9 1032 aaPredicted RBP14.18□□□□□ -0.14
CLCN3-210ENST00000515420 ATG2AQ2TAZ0 1938 aa14.17□□□□□ -0.14
CLCN3-210ENST00000515420 MYH15Q9Y2K3 1946 aa14.17□□□□□ -0.14
CLCN3-210ENST00000515420 CARNS1A5YM72 827 aa14.17□□□□□ -0.14
CLCN3-210ENST00000515420 VWA3AA6NCI4 1184 aa14.17□□□□□ -0.14
CLCN3-210ENST00000515420 STX6O43752 255 aa14.17□□□□□ -0.14
CLCN3-210ENST00000515420 EYA4O95677 639 aa14.17□□□□□ -0.14
CLCN3-210ENST00000515420 ATF7P17544 494 aaPredicted RBP14.17□□□□□ -0.14
CLCN3-210ENST00000515420 HOXA11P31270 313 aaPredicted RBP14.17□□□□□ -0.14
CLCN3-210ENST00000515420 NCBP1Q09161 790 aaKnown RBP14.17□□□□□ -0.14
CLCN3-210ENST00000515420 RESTQ13127 1097 aa14.17□□□□□ -0.14
CLCN3-210ENST00000515420 PPP2R5AQ15172 486 aa14.17□□□□□ -0.14
CLCN3-210ENST00000515420 PAN2Q504Q3 1202 aaKnown RBP14.17□□□□□ -0.14
CLCN3-210ENST00000515420 TIGD5Q53EQ6 642 aa14.17□□□□□ -0.14
CLCN3-210ENST00000515420 FAM102BQ5T8I3 360 aa14.17□□□□□ -0.14
CLCN3-210ENST00000515420 CDCA2Q69YH5 1023 aaPredicted RBP14.17□□□□□ -0.14
CLCN3-210ENST00000515420 ABI1Q8IZP0 508 aa14.17□□□□□ -0.14
CLCN3-210ENST00000515420 LRRC43Q8N309 656 aa14.17□□□□□ -0.14
CLCN3-210ENST00000515420 KIFAP3Q92845 792 aa14.17□□□□□ -0.14
CLCN3-210ENST00000515420 PRIMPOLQ96LW4 560 aa14.17□□□□□ -0.14
CLCN3-210ENST00000515420 CASD1Q96PB1 797 aa14.17□□□□□ -0.14
CLCN3-210ENST00000515420 MRPL9Q9BYD2 267 aaKnown RBP14.17□□□□□ -0.14
CLCN3-210ENST00000515420 C2orf40Q9H1Z8 148 aa14.17□□□□□ -0.14
CLCN3-210ENST00000515420 BHMT2Q9H2M3 363 aa14.17□□□□□ -0.14
CLCN3-210ENST00000515420 ZSCAN16Q9H4T2 348 aaPredicted RBP14.17□□□□□ -0.14
CLCN3-210ENST00000515420 FAM105AQ9NUU6 356 aa14.17□□□□□ -0.14
CLCN3-210ENST00000515420 RNF19AQ9NV58 838 aa14.17□□□□□ -0.14
CLCN3-210ENST00000515420 A0A087WWV3 80 aa14.16□□□□□ -0.14
CLCN3-210ENST00000515420 PP2D1A8MPX8 630 aa14.16□□□□□ -0.14
CLCN3-210ENST00000515420 INO80B-WBP1J3KQ70 363 aa14.16□□□□□ -0.14
CLCN3-210ENST00000515420 FGFR1P11362 822 aa14.16□□□□□ -0.14
CLCN3-210ENST00000515420 LAG3P18627 525 aa14.16□□□□□ -0.14
CLCN3-210ENST00000515420 LONP1P36776 959 aaKnown RBP14.16□□□□□ -0.14
CLCN3-210ENST00000515420 NAMPTP43490 491 aa14.16□□□□□ -0.14
CLCN3-210ENST00000515420 GATMP50440 423 aa14.16□□□□□ -0.14
CLCN3-210ENST00000515420 MBTD1Q05BQ5 628 aa14.16□□□□□ -0.14
CLCN3-210ENST00000515420 SF3A1Q15459 793 aaKnown RBP14.16□□□□□ -0.14
CLCN3-210ENST00000515420 CCDC85BQ15834 202 aaPredicted RBP14.16□□□□□ -0.14
CLCN3-210ENST00000515420 FAM187BQ17R55 369 aa14.16□□□□□ -0.14
CLCN3-210ENST00000515420 NOTUMQ6P988 496 aa14.16□□□□□ -0.14
CLCN3-210ENST00000515420 MICALL1Q8N3F8 863 aa14.16□□□□□ -0.14
CLCN3-210ENST00000515420 CNNM3Q8NE01 707 aa14.16□□□□□ -0.14
CLCN3-210ENST00000515420 PGBD4Q96DM1 585 aa14.16□□□□□ -0.14
CLCN3-210ENST00000515420 TIPINQ9BVW5 301 aa14.16□□□□□ -0.14
CLCN3-210ENST00000515420 THEGQ9P2T0 379 aa14.16□□□□□ -0.14
CLCN3-210ENST00000515420 COG5Q9UP83 839 aa14.16□□□□□ -0.14
CLCN3-210ENST00000515420 MTMR6Q9Y217 621 aa14.16□□□□□ -0.14
CLCN3-210ENST00000515420 PCDHB12Q9Y5F1 795 aa14.16□□□□□ -0.14
CLCN3-210ENST00000515420 A0A0C4DFX4 3053 aa14.16□□□□□ -0.14
CLCN3-210ENST00000515420 CNTNAP2Q9UHC6 1331 aa14.15□□□□□ -0.14
CLCN3-210ENST00000515420 MYH11P35749 1972 aa14.15□□□□□ -0.14
CLCN3-210ENST00000515420 PLXNA4Q9HCM2 1894 aa14.15□□□□□ -0.14
CLCN3-210ENST00000515420 LRRIQ4A6NIV6 560 aa14.15□□□□□ -0.14
CLCN3-210ENST00000515420 TSPAN1O60635 241 aa14.15□□□□□ -0.14
CLCN3-210ENST00000515420 CDC25AP30304 524 aa14.15□□□□□ -0.14
CLCN3-210ENST00000515420 UBE3AQ05086 875 aa14.15□□□□□ -0.14
CLCN3-210ENST00000515420 AMHR2Q16671 573 aa14.15□□□□□ -0.14
CLCN3-210ENST00000515420 CLLU1OSQ5K130 101 aa14.15□□□□□ -0.14
CLCN3-210ENST00000515420 MRPL10Q7Z7H8 261 aaKnown RBP14.15□□□□□ -0.14
CLCN3-210ENST00000515420 ZBTB8OSQ8IWT0 167 aa14.15□□□□□ -0.14
CLCN3-210ENST00000515420 ATXN2LQ8WWM7 1075 aaKnown RBP14.15□□□□□ -0.14
CLCN3-210ENST00000515420 PPM1EQ8WY54 764 aa14.15□□□□□ -0.14
CLCN3-210ENST00000515420 CDK5RAP3Q96JB5 506 aa14.15□□□□□ -0.14
CLCN3-210ENST00000515420 CWH43Q9H720 699 aa14.15□□□□□ -0.14
CLCN3-210ENST00000515420 GPRC5CQ9NQ84 441 aa14.15□□□□□ -0.14
CLCN3-210ENST00000515420 TYW1Q9NV66 732 aaKnown RBP14.15□□□□□ -0.14
CLCN3-210ENST00000515420 PRMT7Q9NVM4 692 aaPredicted RBP14.15□□□□□ -0.14
CLCN3-210ENST00000515420 KCND2Q9NZV8 630 aa14.15□□□□□ -0.14
CLCN3-210ENST00000515420 PLAGL2Q9UPG8 496 aa14.15□□□□□ -0.14
CLCN3-210ENST00000515420 ZMYM2Q9UBW7 1377 aa14.14□□□□□ -0.15
CLCN3-210ENST00000515420 E9PMD0 336 aa14.14□□□□□ -0.15
CLCN3-210ENST00000515420 ITGB1P05556 798 aa14.14□□□□□ -0.15
CLCN3-210ENST00000515420 HSP90AA1P07900 732 aaKnown RBP14.14□□□□□ -0.15
CLCN3-210ENST00000515420 NCLP19338 710 aaKnown RBP14.14□□□□□ -0.15
CLCN3-210ENST00000515420 IBSPP21815 317 aaPredicted RBP14.14□□□□□ -0.15
CLCN3-210ENST00000515420 PPM1AP35813 382 aa14.14□□□□□ -0.15
CLCN3-210ENST00000515420 EFNA5P52803 228 aa14.14□□□□□ -0.15
CLCN3-210ENST00000515420 PTPAQ15257 358 aa14.14□□□□□ -0.15
CLCN3-210ENST00000515420 TMEM119Q4V9L6 283 aa14.14□□□□□ -0.15
CLCN3-210ENST00000515420 UBXN11Q5T124 520 aa14.14□□□□□ -0.15
CLCN3-210ENST00000515420 GLB1LQ6UWU2 654 aa14.14□□□□□ -0.15
CLCN3-210ENST00000515420 COLGALT1Q8NBJ5 622 aa14.14□□□□□ -0.15
CLCN3-210ENST00000515420 RNF169Q8NCN4 708 aa14.14□□□□□ -0.15
CLCN3-210ENST00000515420 IFT74Q96LB3 600 aa14.14□□□□□ -0.15
CLCN3-210ENST00000515420 DRC1Q96MC2 740 aa14.14□□□□□ -0.15
CLCN3-210ENST00000515420 CSRNP2Q9H175 543 aa14.14□□□□□ -0.15
CLCN3-210ENST00000515420 FZD8Q9H461 694 aa14.14□□□□□ -0.15
CLCN3-210ENST00000515420 NSUN3Q9H649 340 aaKnown RBP14.14□□□□□ -0.15
CLCN3-210ENST00000515420 C17orf75Q9HAS0 396 aa14.14□□□□□ -0.15
CLCN3-210ENST00000515420 UBN1Q9NPG3 1134 aa14.14□□□□□ -0.15
CLCN3-210ENST00000515420 PCDHB2Q9Y5E7 798 aa14.14□□□□□ -0.15
CLCN3-210ENST00000515420 PHLPP2Q6ZVD8 1323 aa14.14□□□□□ -0.15
CLCN3-210ENST00000515420 BRWD1Q9NSI6 2320 aa14.13□□□□□ -0.15
CLCN3-210ENST00000515420 A0A1B0GUA9 196 aa14.13□□□□□ -0.15
CLCN3-210ENST00000515420 GRM6O15303 877 aa14.13□□□□□ -0.15
CLCN3-210ENST00000515420 ARF4P18085 180 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms