RNA–Protein interactions for RNA: ENST00000515198.5

PTCD2-210, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 881 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-210ENST00000515198 SSBP05455 408 aaKnown RBP eCLIP13.82□□□□□ -0.2
PTCD2-210ENST00000515198 IGFBP4P22692 258 aa13.82□□□□□ -0.2
PTCD2-210ENST00000515198 AXLP30530 894 aa13.82□□□□□ -0.2
PTCD2-210ENST00000515198 TXLNAP40222 546 aa13.82□□□□□ -0.2
PTCD2-210ENST00000515198 NAMPTP43490 491 aa13.82□□□□□ -0.2
PTCD2-210ENST00000515198 NASPP49321 788 aaPredicted RBP13.82□□□□□ -0.2
PTCD2-210ENST00000515198 GRIN1Q05586 938 aa13.82□□□□□ -0.2
PTCD2-210ENST00000515198 SLC39A14Q15043 492 aa13.82□□□□□ -0.2
PTCD2-210ENST00000515198 STK38Q15208 465 aa13.82□□□□□ -0.2
PTCD2-210ENST00000515198 TMEM119Q4V9L6 283 aa13.82□□□□□ -0.2
PTCD2-210ENST00000515198 PAN2Q504Q3 1202 aaKnown RBP13.82□□□□□ -0.2
PTCD2-210ENST00000515198 EPC2Q52LR7 807 aa13.82□□□□□ -0.2
PTCD2-210ENST00000515198 KCNK18Q7Z418 384 aa13.82□□□□□ -0.2
PTCD2-210ENST00000515198 SPRED2Q7Z698 418 aa13.82□□□□□ -0.2
PTCD2-210ENST00000515198 TMEM192Q8IY95 271 aa13.82□□□□□ -0.2
PTCD2-210ENST00000515198 ABI1Q8IZP0 508 aa13.82□□□□□ -0.2
PTCD2-210ENST00000515198 RNF169Q8NCN4 708 aa13.82□□□□□ -0.2
PTCD2-210ENST00000515198 MAFAQ8NHW3 353 aaPredicted RBP13.82□□□□□ -0.2
PTCD2-210ENST00000515198 DEPTORQ8TB45 409 aa13.82□□□□□ -0.2
PTCD2-210ENST00000515198 C17orf80Q9BSJ5 609 aa13.82□□□□□ -0.2
PTCD2-210ENST00000515198 TIPINQ9BVW5 301 aa13.82□□□□□ -0.2
PTCD2-210ENST00000515198 CSRNP2Q9H175 543 aa13.82□□□□□ -0.2
PTCD2-210ENST00000515198 C2orf40Q9H1Z8 148 aa13.82□□□□□ -0.2
PTCD2-210ENST00000515198 FBXO2Q9UK22 296 aaPredicted RBP13.82□□□□□ -0.2
PTCD2-210ENST00000515198 SRPRBQ9Y5M8 271 aaKnown RBP13.82□□□□□ -0.2
PTCD2-210ENST00000515198 LAMA2P24043 3122 aaKnown RBP13.81□□□□□ -0.2
PTCD2-210ENST00000515198 MYO9BQ13459 2157 aa13.81□□□□□ -0.2
PTCD2-210ENST00000515198 EPOPA6NHQ4 379 aa13.81□□□□□ -0.2
PTCD2-210ENST00000515198 TBKBP1A7MCY6 615 aa13.81□□□□□ -0.2
PTCD2-210ENST00000515198 RFXAPO00287 272 aa13.81□□□□□ -0.2
PTCD2-210ENST00000515198 CTNNB1P35222 781 aa13.81□□□□□ -0.2
PTCD2-210ENST00000515198 GATMP50440 423 aa13.81□□□□□ -0.2
PTCD2-210ENST00000515198 MBTD1Q05BQ5 628 aa13.81□□□□□ -0.2
PTCD2-210ENST00000515198 ADGRE1Q14246 886 aa13.81□□□□□ -0.2
PTCD2-210ENST00000515198 CDCA2Q69YH5 1023 aaPredicted RBP13.81□□□□□ -0.2
PTCD2-210ENST00000515198 RINT1Q6NUQ1 792 aa13.81□□□□□ -0.2
PTCD2-210ENST00000515198 NOTUMQ6P988 496 aa13.81□□□□□ -0.2
PTCD2-210ENST00000515198 SYT2Q8N9I0 419 aaPredicted RBP13.81□□□□□ -0.2
PTCD2-210ENST00000515198 KRI1Q8N9T8 703 aaKnown RBP13.81□□□□□ -0.2
PTCD2-210ENST00000515198 DRC1Q96MC2 740 aa13.81□□□□□ -0.2
PTCD2-210ENST00000515198 RUSC1Q9BVN2 902 aa13.81□□□□□ -0.2
PTCD2-210ENST00000515198 CCSER1Q9C0I3 900 aa13.81□□□□□ -0.2
PTCD2-210ENST00000515198 TMEM117Q9H0C3 514 aa13.81□□□□□ -0.2
PTCD2-210ENST00000515198 FAM105AQ9NUU6 356 aa13.81□□□□□ -0.2
PTCD2-210ENST00000515198 PRMT7Q9NVM4 692 aaPredicted RBP13.81□□□□□ -0.2
PTCD2-210ENST00000515198 KCND2Q9NZV8 630 aa13.81□□□□□ -0.2
PTCD2-210ENST00000515198 CCDC39Q9UFE4 941 aa13.81□□□□□ -0.2
PTCD2-210ENST00000515198 KIAA1671Q9BY89 1806 aa13.8□□□□□ -0.2
PTCD2-210ENST00000515198 MYH11P35749 1972 aa13.8□□□□□ -0.2
PTCD2-210ENST00000515198 SPTLC2O15270 562 aa13.8□□□□□ -0.2
PTCD2-210ENST00000515198 TSPAN1O60635 241 aa13.8□□□□□ -0.2
PTCD2-210ENST00000515198 YEATS4O95619 227 aa13.8□□□□□ -0.2
PTCD2-210ENST00000515198 RB1P06400 928 aa13.8□□□□□ -0.2
PTCD2-210ENST00000515198 PLA2G4BP0C869 781 aa13.8□□□□□ -0.2
PTCD2-210ENST00000515198 FGFR1P11362 822 aa13.8□□□□□ -0.2
PTCD2-210ENST00000515198 PLCG1P19174 1290 aa13.8□□□□□ -0.2
PTCD2-210ENST00000515198 HOXA11P31270 313 aaPredicted RBP13.8□□□□□ -0.2
PTCD2-210ENST00000515198 BMPR1AP36894 532 aa13.8□□□□□ -0.2
PTCD2-210ENST00000515198 KARSQ15046 597 aaKnown RBP13.8□□□□□ -0.2
PTCD2-210ENST00000515198 SPOUT1Q5T280 376 aaKnown RBP13.8□□□□□ -0.2
PTCD2-210ENST00000515198 ATL3Q6DD88 541 aa13.8□□□□□ -0.2
PTCD2-210ENST00000515198 C1orf186Q6ZWK4 172 aa13.8□□□□□ -0.2
PTCD2-210ENST00000515198 LINC00301Q8NCQ3 95 aa13.8□□□□□ -0.2
PTCD2-210ENST00000515198 GDPD5Q8WTR4 605 aa13.8□□□□□ -0.2
PTCD2-210ENST00000515198 RSPH1Q8WYR4 309 aa13.8□□□□□ -0.2
PTCD2-210ENST00000515198 BSNDQ8WZ55 320 aa13.8□□□□□ -0.2
PTCD2-210ENST00000515198 CLP1Q92989 425 aaKnown RBP13.8□□□□□ -0.2
PTCD2-210ENST00000515198 PGBD4Q96DM1 585 aa13.8□□□□□ -0.2
PTCD2-210ENST00000515198 CCDC51Q96ER9 411 aa13.8□□□□□ -0.2
PTCD2-210ENST00000515198 PRIMPOLQ96LW4 560 aa13.8□□□□□ -0.2
PTCD2-210ENST00000515198 TFIP11Q9UBB9 837 aaKnown RBP13.8□□□□□ -0.2
PTCD2-210ENST00000515198 MRPL42Q9Y6G3 142 aaKnown RBP13.8□□□□□ -0.2
PTCD2-210ENST00000515198 C5orf67F2Z3F1 127 aa13.79□□□□□ -0.2
PTCD2-210ENST00000515198 H3BNC9 293 aa13.79□□□□□ -0.2
PTCD2-210ENST00000515198 ZNF623O75123 536 aa13.79□□□□□ -0.2
PTCD2-210ENST00000515198 HIP1RO75146 1068 aa13.79□□□□□ -0.2
PTCD2-210ENST00000515198 POU3F3P20264 500 aaPredicted RBP13.79□□□□□ -0.2
PTCD2-210ENST00000515198 GUCY2CP25092 1073 aa13.79□□□□□ -0.2
PTCD2-210ENST00000515198 EFNA5P52803 228 aa13.79□□□□□ -0.2
PTCD2-210ENST00000515198 SLC12A3P55017 1021 aa13.79□□□□□ -0.2
PTCD2-210ENST00000515198 DMP1Q13316 513 aaPredicted RBP13.79□□□□□ -0.2
PTCD2-210ENST00000515198 GPM6BQ13491 265 aa13.79□□□□□ -0.2
PTCD2-210ENST00000515198 PKP1Q13835 747 aa13.79□□□□□ -0.2
PTCD2-210ENST00000515198 MAPK6Q16659 721 aa13.79□□□□□ -0.2
PTCD2-210ENST00000515198 FAM187BQ17R55 369 aa13.79□□□□□ -0.2
PTCD2-210ENST00000515198 FOXD4L6Q3SYB3 417 aaPredicted RBP13.79□□□□□ -0.2
PTCD2-210ENST00000515198 SPECC1Q5M775 1068 aa13.79□□□□□ -0.2
PTCD2-210ENST00000515198 FOXD4L3Q6VB84 417 aaPredicted RBP13.79□□□□□ -0.2
PTCD2-210ENST00000515198 ZNF598Q86UK7 904 aaKnown RBP13.79□□□□□ -0.2
PTCD2-210ENST00000515198 CNNM3Q8NE01 707 aa13.79□□□□□ -0.2
PTCD2-210ENST00000515198 LARP4BQ92615 738 aaKnown RBP13.79□□□□□ -0.2
PTCD2-210ENST00000515198 SYMPKQ92797 1274 aaKnown RBP13.79□□□□□ -0.2
PTCD2-210ENST00000515198 CPB2Q96IY4 423 aa13.79□□□□□ -0.2
PTCD2-210ENST00000515198 EPSTI1Q96J88 318 aa13.79□□□□□ -0.2
PTCD2-210ENST00000515198 CLIC6Q96NY7 704 aa13.79□□□□□ -0.2
PTCD2-210ENST00000515198 C11orf84Q9BUA3 381 aaPredicted RBP13.79□□□□□ -0.2
PTCD2-210ENST00000515198 PLVAPQ9BX97 442 aa13.79□□□□□ -0.2
PTCD2-210ENST00000515198 C17orf75Q9HAS0 396 aa13.79□□□□□ -0.2
PTCD2-210ENST00000515198 POLD4Q9HCU8 107 aa13.79□□□□□ -0.2
PTCD2-210ENST00000515198 AAASQ9NRG9 546 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms