RNA–Protein interactions for RNA: ENST00000515022.5

TRIM6-211, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,060 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-211ENST00000515022 CNNM2Q9H8M5 875 aa9.55□□□□□ -0.88
TRIM6-211ENST00000515022 PSTPIP2Q9H939 334 aa9.55□□□□□ -0.88
TRIM6-211ENST00000515022 KCNH7Q9NS40 1196 aa9.55□□□□□ -0.88
TRIM6-211ENST00000515022 NCDNQ9UBB6 729 aa9.55□□□□□ -0.88
TRIM6-211ENST00000515022 RABGEF1Q9UJ41 708 aa9.55□□□□□ -0.88
TRIM6-211ENST00000515022 PCDHA6Q9UN73 950 aa9.55□□□□□ -0.88
TRIM6-211ENST00000515022 PCDHA8Q9Y5H6 950 aa9.55□□□□□ -0.88
TRIM6-211ENST00000515022 HOXA2O43364 376 aa9.54□□□□□ -0.88
TRIM6-211ENST00000515022 B4GALT3O60512 393 aa9.54□□□□□ -0.88
TRIM6-211ENST00000515022 CSDE1O75534 798 aaKnown RBP9.54□□□□□ -0.88
TRIM6-211ENST00000515022 C22orf31O95567 290 aa9.54□□□□□ -0.88
TRIM6-211ENST00000515022 ATP4AP20648 1035 aa9.54□□□□□ -0.88
TRIM6-211ENST00000515022 ALDH7A1P49419 539 aaKnown RBP9.54□□□□□ -0.88
TRIM6-211ENST00000515022 WTAPQ15007 396 aa9.54□□□□□ -0.88
TRIM6-211ENST00000515022 LETM2Q2VYF4 491 aa9.54□□□□□ -0.88
TRIM6-211ENST00000515022 ZC3H14Q6PJT7 736 aaKnown RBP9.54□□□□□ -0.88
TRIM6-211ENST00000515022 RAB11FIP4Q86YS3 637 aa9.54□□□□□ -0.88
TRIM6-211ENST00000515022 C1orf210Q8IVY1 113 aa9.54□□□□□ -0.88
TRIM6-211ENST00000515022 CCDC60Q8IWA6 550 aaPredicted RBP9.54□□□□□ -0.88
TRIM6-211ENST00000515022 MAML2Q8IZL2 1156 aaPredicted RBP9.54□□□□□ -0.88
TRIM6-211ENST00000515022 SLC44A3Q8N4M1 653 aa9.54□□□□□ -0.88
TRIM6-211ENST00000515022 RRP36Q96EU6 259 aaKnown RBP9.54□□□□□ -0.88
TRIM6-211ENST00000515022 CHAMP1Q96JM3 812 aa9.54□□□□□ -0.88
TRIM6-211ENST00000515022 GBP3Q9H0R5 595 aa9.54□□□□□ -0.88
TRIM6-211ENST00000515022 SFXN1Q9H9B4 322 aa9.54□□□□□ -0.88
TRIM6-211ENST00000515022 DLGAP2Q9P1A6 1054 aa9.54□□□□□ -0.88
TRIM6-211ENST00000515022 WNT16Q9UBV4 365 aa9.54□□□□□ -0.88
TRIM6-211ENST00000515022 SIT1Q9Y3P8 196 aa9.54□□□□□ -0.88
TRIM6-211ENST00000515022 WDR81Q562E7 1941 aa9.54□□□□□ -0.88
TRIM6-211ENST00000515022 MYH15Q9Y2K3 1946 aa9.53□□□□□ -0.88
TRIM6-211ENST00000515022 SPDYE3A6NKU9 549 aa9.53□□□□□ -0.88
TRIM6-211ENST00000515022 HBP1O60381 514 aa9.53□□□□□ -0.88
TRIM6-211ENST00000515022 KINO60870 393 aaKnown RBP9.53□□□□□ -0.88
TRIM6-211ENST00000515022 CTSAP10619 480 aa9.53□□□□□ -0.88
TRIM6-211ENST00000515022 ZSCAN20P17040 1043 aaPredicted RBP9.53□□□□□ -0.88
TRIM6-211ENST00000515022 RXRAP19793 462 aa9.53□□□□□ -0.88
TRIM6-211ENST00000515022 KLRC2P26717 231 aa9.53□□□□□ -0.88
TRIM6-211ENST00000515022 NLRP11P59045 1033 aaKnown RBP9.53□□□□□ -0.88
TRIM6-211ENST00000515022 BMS1Q14692 1282 aaKnown RBP9.53□□□□□ -0.88
TRIM6-211ENST00000515022 PTPN14Q15678 1187 aa9.53□□□□□ -0.88
TRIM6-211ENST00000515022 ODR4Q5SWX8 454 aa9.53□□□□□ -0.88
TRIM6-211ENST00000515022 SWSAP1Q6NVH7 229 aa9.53□□□□□ -0.88
TRIM6-211ENST00000515022 PDXDC2PQ6P474 469 aa9.53□□□□□ -0.88
TRIM6-211ENST00000515022 CATIPQ7Z7H3 387 aa9.53□□□□□ -0.88
TRIM6-211ENST00000515022 ZNF598Q86UK7 904 aaKnown RBP9.53□□□□□ -0.88
TRIM6-211ENST00000515022 LRRC71Q8N4P6 559 aa9.53□□□□□ -0.88
TRIM6-211ENST00000515022 TTC13Q8NBP0 860 aa9.53□□□□□ -0.88
TRIM6-211ENST00000515022 TNPO1Q92973 898 aaKnown RBP9.53□□□□□ -0.88
TRIM6-211ENST00000515022 IGSF21Q96ID5 467 aa9.53□□□□□ -0.88
TRIM6-211ENST00000515022 KLHL5Q96PQ7 755 aa9.53□□□□□ -0.88
TRIM6-211ENST00000515022 MXRA8Q9BRK3 442 aa9.53□□□□□ -0.88
TRIM6-211ENST00000515022 DSCC1Q9BVC3 393 aa9.53□□□□□ -0.88
TRIM6-211ENST00000515022 AGO4Q9HCK5 861 aaKnown RBP9.53□□□□□ -0.88
TRIM6-211ENST00000515022 ARHGEF3Q9NR81 526 aa9.53□□□□□ -0.88
TRIM6-211ENST00000515022 KIAA1468Q9P260 1216 aa9.53□□□□□ -0.88
TRIM6-211ENST00000515022 IGSF9Q9P2J2 1179 aa9.53□□□□□ -0.88
TRIM6-211ENST00000515022 DNAJB4Q9UDY4 337 aa9.53□□□□□ -0.88
TRIM6-211ENST00000515022 AKT3Q9Y243 479 aa9.53□□□□□ -0.88
TRIM6-211ENST00000515022 INPP5FQ9Y2H2 1132 aa9.53□□□□□ -0.88
TRIM6-211ENST00000515022 RALGAPA1Q6GYQ0 2036 aa9.53□□□□□ -0.88
TRIM6-211ENST00000515022 CEP295Q9C0D2 2601 aa9.52□□□□□ -0.88
TRIM6-211ENST00000515022 ANKRD11Q6UB99 2663 aaPredicted RBP9.52□□□□□ -0.88
TRIM6-211ENST00000515022 FRYQ5TBA9 3013 aa9.52□□□□□ -0.89
TRIM6-211ENST00000515022 ERICH2A1L162 156 aa9.52□□□□□ -0.89
TRIM6-211ENST00000515022 MEIS3P2A8K0S8 358 aa9.52□□□□□ -0.89
TRIM6-211ENST00000515022 C2CD2LO14523 706 aa9.52□□□□□ -0.89
TRIM6-211ENST00000515022 CDC45O75419 566 aa9.52□□□□□ -0.89
TRIM6-211ENST00000515022 RFPL2O75678 378 aa9.52□□□□□ -0.89
TRIM6-211ENST00000515022 ATG7O95352 703 aa9.52□□□□□ -0.89
TRIM6-211ENST00000515022 GALTP07902 379 aa9.52□□□□□ -0.89
TRIM6-211ENST00000515022 CNPP09543 421 aaKnown RBP9.52□□□□□ -0.89
TRIM6-211ENST00000515022 SPATA31D3P0C874 917 aa9.52□□□□□ -0.89
TRIM6-211ENST00000515022 SLC11A1P49279 550 aa9.52□□□□□ -0.89
TRIM6-211ENST00000515022 NT5C2P49902 561 aa9.52□□□□□ -0.89
TRIM6-211ENST00000515022 CLCN4P51793 760 aa9.52□□□□□ -0.89
TRIM6-211ENST00000515022 CSTF1Q05048 431 aaKnown RBP9.52□□□□□ -0.89
TRIM6-211ENST00000515022 COL9A2Q14055 689 aaPredicted RBP9.52□□□□□ -0.89
TRIM6-211ENST00000515022 ZNF484Q5JVG2 852 aa9.52□□□□□ -0.89
TRIM6-211ENST00000515022 KIAA0319Q5VV43 1072 aa9.52□□□□□ -0.89
TRIM6-211ENST00000515022 FAM160B1Q5W0V3 765 aa9.52□□□□□ -0.89
TRIM6-211ENST00000515022 DCLRE1AQ6PJP8 1040 aa9.52□□□□□ -0.89
TRIM6-211ENST00000515022 ABHD15Q6UXT9 468 aa9.52□□□□□ -0.89
TRIM6-211ENST00000515022 SPATA31D4Q6ZUB0 917 aa9.52□□□□□ -0.89
TRIM6-211ENST00000515022 DDX53Q86TM3 631 aaKnown RBP9.52□□□□□ -0.89
TRIM6-211ENST00000515022 CKAP2LQ8IYA6 745 aa9.52□□□□□ -0.89
TRIM6-211ENST00000515022 CCDC82Q8N4S0 544 aa9.52□□□□□ -0.89
TRIM6-211ENST00000515022 SRBD1Q8N5C6 995 aaKnown RBP9.52□□□□□ -0.89
TRIM6-211ENST00000515022 SPZ1Q9BXG8 430 aa9.52□□□□□ -0.89
TRIM6-211ENST00000515022 ADAMTS10Q9H324 1103 aa9.52□□□□□ -0.89
TRIM6-211ENST00000515022 NRDE2Q9H7Z3 1164 aa9.52□□□□□ -0.89
TRIM6-211ENST00000515022 PARD6AQ9NPB6 346 aa9.52□□□□□ -0.89
TRIM6-211ENST00000515022 ZNF302Q9NR11 478 aa9.52□□□□□ -0.89
TRIM6-211ENST00000515022 MAN1C1Q9NR34 630 aa9.52□□□□□ -0.89
TRIM6-211ENST00000515022 SPATA6Q9NWH7 488 aaPredicted RBP9.52□□□□□ -0.89
TRIM6-211ENST00000515022 SEC63Q9UGP8 760 aaKnown RBP9.52□□□□□ -0.89
TRIM6-211ENST00000515022 CDV3Q9UKY7 258 aaKnown RBP9.52□□□□□ -0.89
TRIM6-211ENST00000515022 USP18Q9UMW8 372 aa9.52□□□□□ -0.89
TRIM6-211ENST00000515022 NFASCO94856 1347 aa9.52□□□□□ -0.89
TRIM6-211ENST00000515022 IGKV6D-21A0A0A0MT36 114 aa9.51□□□□□ -0.89
TRIM6-211ENST00000515022 CCDC195A0A1B0GUA6 201 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms