RNA–Protein interactions for RNA: ENST00000515006.5

COPB2-213, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 5

Gene COPB2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-213ENST00000515006 C7orf31Q8N865 590 aa6.54□□□□□ -1.36
COPB2-213ENST00000515006 TMEM161BQ8NDZ6 487 aa6.54□□□□□ -1.36
COPB2-213ENST00000515006 ZNF397Q8NF99 534 aaPredicted RBP6.54□□□□□ -1.36
COPB2-213ENST00000515006 PRPF31Q8WWY3 499 aaKnown RBP6.54□□□□□ -1.36
COPB2-213ENST00000515006 BICD1Q96G01 975 aa6.54□□□□□ -1.36
COPB2-213ENST00000515006 DUSP9Q99956 384 aaKnown RBP6.54□□□□□ -1.36
COPB2-213ENST00000515006 TSEN34Q9BSV6 310 aaKnown RBP6.54□□□□□ -1.36
COPB2-213ENST00000515006 MTG1Q9BT17 334 aaPredicted RBP6.54□□□□□ -1.36
COPB2-213ENST00000515006 NOC4LQ9BVI4 516 aaKnown RBP6.54□□□□□ -1.36
COPB2-213ENST00000515006 XPO4Q9C0E2 1151 aaKnown RBP6.54□□□□□ -1.36
COPB2-213ENST00000515006 UPF3AQ9H1J1 476 aaKnown RBP6.54□□□□□ -1.36
COPB2-213ENST00000515006 RNPEPQ9H4A4 650 aa6.54□□□□□ -1.36
COPB2-213ENST00000515006 HMX1Q9NP08 348 aaPredicted RBP6.54□□□□□ -1.36
COPB2-213ENST00000515006 FLRT1Q9NZU1 646 aa6.54□□□□□ -1.36
COPB2-213ENST00000515006 ARHGAP28Q9P2N2 729 aa6.54□□□□□ -1.36
COPB2-213ENST00000515006 SUCLA2Q9P2R7 463 aaPredicted RBP6.54□□□□□ -1.36
COPB2-213ENST00000515006 ARMCX3Q9UH62 379 aaPredicted RBP6.54□□□□□ -1.36
COPB2-213ENST00000515006 GABRQQ9UN88 632 aa6.54□□□□□ -1.36
COPB2-213ENST00000515006 DAAM1Q9Y4D1 1078 aa6.54□□□□□ -1.36
COPB2-213ENST00000515006 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.54□□□□□ -1.36
COPB2-213ENST00000515006 PARP14Q460N5 1801 aa6.54□□□□□ -1.36
COPB2-213ENST00000515006 MYH7BA7E2Y1 1941 aa6.54□□□□□ -1.36
COPB2-213ENST00000515006 SMIM35A0A1B0GVV1 85 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 TRIM49BA6NDI0 452 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 LRRIQ4A6NIV6 560 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 PES1O00541 588 aaKnown RBP6.53□□□□□ -1.36
COPB2-213ENST00000515006 SLC16A4O15374 487 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 EXOC3O60645 756 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 N4BP1O75113 896 aaKnown RBP6.53□□□□□ -1.36
COPB2-213ENST00000515006 NR3C1P04150 777 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 MYL3P08590 195 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 C6orf222P0C671 652 aaPredicted RBP6.53□□□□□ -1.36
COPB2-213ENST00000515006 MYBP10242 640 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 ATP1A3P13637 1013 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 PRKAR2AP13861 404 aaKnown RBP6.53□□□□□ -1.36
COPB2-213ENST00000515006 SFPQP23246 707 aaKnown RBP eCLIP6.53□□□□□ -1.36
COPB2-213ENST00000515006 GLRA2P23416 452 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 CST5P28325 142 aaPredicted RBP6.53□□□□□ -1.36
COPB2-213ENST00000515006 GRK4P32298 578 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 PSEN1P49768 467 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 PSEN2P49810 448 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 LIG4P49917 911 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 UBXN1Q04323 297 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 PTPN11Q06124 597 aaPredicted RBP6.53□□□□□ -1.36
COPB2-213ENST00000515006 CACNB2Q08289 660 aaPredicted RBP6.53□□□□□ -1.36
COPB2-213ENST00000515006 LAMTOR4Q0VGL1 99 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 MFSD10Q14728 455 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 KRT31Q15323 416 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 SURF1Q15526 300 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 GRIK4Q16099 956 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 KIAA0753Q2KHM9 967 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 VWA3BQ502W6 1294 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 CEP135Q66GS9 1140 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 ARMCX5Q6P1M9 558 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 TAF2Q6P1X5 1199 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 MTHFD1LQ6UB35 978 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 INTS8Q75QN2 995 aaKnown RBP6.53□□□□□ -1.36
COPB2-213ENST00000515006 SRGAP1Q7Z6B7 1085 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 XXYLT1Q8NBI6 393 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 CCDC150Q8NCX0 1101 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 CD99L2Q8TCZ2 262 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 ZNF296Q8WUU4 475 aaPredicted RBP6.53□□□□□ -1.36
COPB2-213ENST00000515006 TRIB2Q92519 343 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 HPS3Q969F9 1004 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 VTI1AQ96AJ9 217 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 TMEM143Q96AN5 459 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 CNOT6LQ96LI5 555 aaKnown RBP6.53□□□□□ -1.36
COPB2-213ENST00000515006 PRIMPOLQ96LW4 560 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 MED15Q96RN5 788 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 FIZ1Q96SL8 496 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 CEP89Q96ST8 783 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 MRPL4Q9BYD3 311 aaKnown RBP6.53□□□□□ -1.36
COPB2-213ENST00000515006 EDEM3Q9BZQ6 932 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 NUCKS1Q9H1E3 243 aaKnown RBP6.53□□□□□ -1.36
COPB2-213ENST00000515006 HSD3B7Q9H2F3 369 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 NDST4Q9H3R1 872 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 XPNPEP3Q9NQH7 507 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 XPNPEP1Q9NQW7 623 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 AGPAT3Q9NRZ7 376 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 PRMT7Q9NVM4 692 aaPredicted RBP6.53□□□□□ -1.36
COPB2-213ENST00000515006 DMAC2Q9NW81 257 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 DDX20Q9UHI6 824 aaKnown RBP6.53□□□□□ -1.36
COPB2-213ENST00000515006 ARIH1Q9Y4X5 557 aaPredicted RBP6.53□□□□□ -1.36
COPB2-213ENST00000515006 ZNF236Q9UL36 1845 aa6.53□□□□□ -1.36
COPB2-213ENST00000515006 ITIH6Q6UXX5 1313 aa6.52□□□□□ -1.37
COPB2-213ENST00000515006 C17orf102A2RUQ5 167 aa6.52□□□□□ -1.37
COPB2-213ENST00000515006 TMEM150BA6NC51 233 aa6.52□□□□□ -1.37
COPB2-213ENST00000515006 MOXD2PA6NHM9 499 aa6.52□□□□□ -1.37
COPB2-213ENST00000515006 ZNF233A6NK53 670 aa6.52□□□□□ -1.37
COPB2-213ENST00000515006 LGALS16A8MUM7 142 aa6.52□□□□□ -1.37
COPB2-213ENST00000515006 M0QZ92 97 aa6.52□□□□□ -1.37
COPB2-213ENST00000515006 HAS3O00219 553 aa6.52□□□□□ -1.37
COPB2-213ENST00000515006 ACKR2O00590 384 aa6.52□□□□□ -1.37
COPB2-213ENST00000515006 HNRNPDLO14979 420 aaKnown RBP6.52□□□□□ -1.37
COPB2-213ENST00000515006 P4HA2O15460 535 aa6.52□□□□□ -1.37
COPB2-213ENST00000515006 CLDN3O15551 220 aa6.52□□□□□ -1.37
COPB2-213ENST00000515006 TGFB1I1O43294 461 aa6.52□□□□□ -1.37
COPB2-213ENST00000515006 TOM1L1O75674 476 aa6.52□□□□□ -1.37
COPB2-213ENST00000515006 C22orf31O95567 290 aa6.52□□□□□ -1.37
COPB2-213ENST00000515006 PIGRP01833 764 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms