RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 TFDP1Q14186 410 aa9.21□□□□□ -0.94
CCL28-204ENST00000514421 CAMK4Q16566 473 aa9.21□□□□□ -0.94
CCL28-204ENST00000514421 FAM102BQ5T8I3 360 aa9.21□□□□□ -0.94
CCL28-204ENST00000514421 MAEAQ7L5Y9 396 aa9.21□□□□□ -0.94
CCL28-204ENST00000514421 SRGAP1Q7Z6B7 1085 aa9.21□□□□□ -0.94
CCL28-204ENST00000514421 MYOCDQ8IZQ8 938 aa9.21□□□□□ -0.94
CCL28-204ENST00000514421 SYT2Q8N9I0 419 aaPredicted RBP9.21□□□□□ -0.94
CCL28-204ENST00000514421 TIFAQ96CG3 184 aa9.21□□□□□ -0.94
CCL28-204ENST00000514421 CLIC6Q96NY7 704 aa9.21□□□□□ -0.94
CCL28-204ENST00000514421 PLIN2Q99541 437 aa9.21□□□□□ -0.94
CCL28-204ENST00000514421 RAD9AQ99638 391 aa9.21□□□□□ -0.94
CCL28-204ENST00000514421 CSRNP2Q9H175 543 aa9.21□□□□□ -0.94
CCL28-204ENST00000514421 TSPYL2Q9H2G4 693 aaPredicted RBP9.21□□□□□ -0.94
CCL28-204ENST00000514421 TMX1Q9H3N1 280 aa9.21□□□□□ -0.94
CCL28-204ENST00000514421 SEMA6BQ9H3T3 888 aa9.21□□□□□ -0.94
CCL28-204ENST00000514421 CHST12Q9NRB3 414 aa9.21□□□□□ -0.94
CCL28-204ENST00000514421 RGS18Q9NS28 235 aa9.21□□□□□ -0.94
CCL28-204ENST00000514421 BMP2KQ9NSY1 1161 aaPredicted RBP9.21□□□□□ -0.94
CCL28-204ENST00000514421 CCDC39Q9UFE4 941 aa9.21□□□□□ -0.94
CCL28-204ENST00000514421 EVPLQ92817 2033 aa9.21□□□□□ -0.94
CCL28-204ENST00000514421 TMEM265A0A087WTH1 108 aa9.2□□□□□ -0.94
CCL28-204ENST00000514421 A0A1B0GVL5 298 aa9.2□□□□□ -0.94
CCL28-204ENST00000514421 RBAK-RBAKDNI3L0D1 243 aa9.2□□□□□ -0.94
CCL28-204ENST00000514421 TLL1O43897 1013 aa9.2□□□□□ -0.94
CCL28-204ENST00000514421 CSDE1O75534 798 aaKnown RBP9.2□□□□□ -0.94
CCL28-204ENST00000514421 UPP2O95045 317 aa9.2□□□□□ -0.94
CCL28-204ENST00000514421 PLA2G4BP0C869 781 aa9.2□□□□□ -0.94
CCL28-204ENST00000514421 STAG3L1P0CL83 205 aa9.2□□□□□ -0.94
CCL28-204ENST00000514421 GLRA2P23416 452 aa9.2□□□□□ -0.94
CCL28-204ENST00000514421 DNAJB2P25686 324 aa9.2□□□□□ -0.94
CCL28-204ENST00000514421 PBX2P40425 430 aa9.2□□□□□ -0.94
CCL28-204ENST00000514421 DSC3Q14574 896 aa9.2□□□□□ -0.94
CCL28-204ENST00000514421 PCBP1Q15365 356 aaKnown RBP eCLIP9.2□□□□□ -0.94
CCL28-204ENST00000514421 TMEM119Q4V9L6 283 aa9.2□□□□□ -0.94
CCL28-204ENST00000514421 RINT1Q6NUQ1 792 aa9.2□□□□□ -0.94
CCL28-204ENST00000514421 FAM117BQ6P1L5 589 aa9.2□□□□□ -0.94
CCL28-204ENST00000514421 SASS6Q6UVJ0 657 aa9.2□□□□□ -0.94
CCL28-204ENST00000514421 C1orf186Q6ZWK4 172 aa9.2□□□□□ -0.94
CCL28-204ENST00000514421 SLC24A5Q71RS6 500 aa9.2□□□□□ -0.94
CCL28-204ENST00000514421 KCNK18Q7Z418 384 aa9.2□□□□□ -0.94
CCL28-204ENST00000514421 RNF149Q8NC42 400 aa9.2□□□□□ -0.94
CCL28-204ENST00000514421 RASSF8Q8NHQ8 419 aa9.2□□□□□ -0.94
CCL28-204ENST00000514421 ASAP3Q8TDY4 903 aa9.2□□□□□ -0.94
CCL28-204ENST00000514421 EPSTI1Q96J88 318 aa9.2□□□□□ -0.94
CCL28-204ENST00000514421 NLRP4Q96MN2 994 aa9.2□□□□□ -0.94
CCL28-204ENST00000514421 ADAM2Q99965 735 aa9.2□□□□□ -0.94
CCL28-204ENST00000514421 BPIFA3Q9BQP9 254 aa9.2□□□□□ -0.94
CCL28-204ENST00000514421 SLC28A3Q9HAS3 691 aa9.2□□□□□ -0.94
CCL28-204ENST00000514421 IFT122Q9HBG6 1241 aa9.2□□□□□ -0.94
CCL28-204ENST00000514421 C1orf112Q9NSG2 853 aa9.2□□□□□ -0.94
CCL28-204ENST00000514421 KIAA1468Q9P260 1216 aa9.2□□□□□ -0.94
CCL28-204ENST00000514421 KCNG1Q9UIX4 513 aa9.2□□□□□ -0.94
CCL28-204ENST00000514421 INSL6Q9Y581 213 aa9.2□□□□□ -0.94
CCL28-204ENST00000514421 LTBP2Q14767 1821 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 DENND3A2RUS2 1198 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 MGEA5O60502 916 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 SSBP05455 408 aaKnown RBP eCLIP9.19□□□□□ -0.94
CCL28-204ENST00000514421 MYOGP15173 224 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 FGFR4P22455 802 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 SFPQP23246 707 aaKnown RBP eCLIP9.19□□□□□ -0.94
CCL28-204ENST00000514421 TXLNAP40222 546 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 SYKP43405 635 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 PHKA2P46019 1235 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 SARSP49591 514 aaKnown RBP9.19□□□□□ -0.94
CCL28-204ENST00000514421 HTRA4P83105 476 aaPredicted RBP9.19□□□□□ -0.94
CCL28-204ENST00000514421 NCBP1Q09161 790 aaKnown RBP9.19□□□□□ -0.94
CCL28-204ENST00000514421 KARSQ15046 597 aaKnown RBP9.19□□□□□ -0.94
CCL28-204ENST00000514421 IQCB1Q15051 598 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 STX1AQ16623 288 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 ANO6Q4KMQ2 910 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 SPECC1Q5M775 1068 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 ZNF697Q5TEC3 545 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 NT5DC1Q5TFE4 455 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 USP49Q70CQ1 688 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 CATSPER4Q7RTX7 472 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 TMCO2Q7Z6W1 182 aaPredicted RBP9.19□□□□□ -0.94
CCL28-204ENST00000514421 IFNLR1Q8IU57 520 aaPredicted RBP9.19□□□□□ -0.94
CCL28-204ENST00000514421 CRIPAKQ8N1N5 446 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 DEFB123Q8N688 67 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 LINC01599Q8WXQ3 324 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 SYMPKQ92797 1274 aaKnown RBP9.19□□□□□ -0.94
CCL28-204ENST00000514421 KIFAP3Q92845 792 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 IFT74Q96LB3 600 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 TIPINQ9BVW5 301 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 NFKBIZQ9BYH8 718 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 POLR3FQ9H1D9 316 aaPredicted RBP9.19□□□□□ -0.94
CCL28-204ENST00000514421 NKX2-4Q9H2Z4 354 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 ZNF576Q9H609 170 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 POLD4Q9HCU8 107 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 GPRC5CQ9NQ84 441 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 KCND2Q9NZV8 630 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 LRFN2Q9ULH4 789 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 YBX2Q9Y2T7 364 aaKnown RBP9.19□□□□□ -0.94
CCL28-204ENST00000514421 PCDHB7Q9Y5E2 793 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 LAMA3Q16787 3333 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 SCN5AQ14524 2016 aa9.19□□□□□ -0.94
CCL28-204ENST00000514421 A0A0U1RQF3 1178 aa9.18□□□□□ -0.94
CCL28-204ENST00000514421 C9IYK1 514 aa9.18□□□□□ -0.94
CCL28-204ENST00000514421 INO80B-WBP1J3KQ70 363 aa9.18□□□□□ -0.94
CCL28-204ENST00000514421 EOMESO95936 686 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms