RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 MSRB2Q9Y3D2 182 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 UBR5O95071 2799 aaPredicted RBP3.76□□□□□ -1.81
CHD1-211ENST00000514344 ABCB11O95342 1321 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 PCNX2A6NKB5 2137 aa3.76□□□□□ -1.81
CHD1-211ENST00000514344 M0R2C6 588 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 OPLAHO14841 1288 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 ARHGAP6O43182 974 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 TOP1P11387 765 aaKnown RBP3.75□□□□□ -1.81
CHD1-211ENST00000514344 CEACAM1P13688 526 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 CCND2P30279 289 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 CCR3P51677 355 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 NTHL1P78549 312 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 FGD1P98174 961 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 PFKPQ01813 784 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 GIT2Q14161 759 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 QRICH1Q2TAL8 776 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 DAB2IPQ5VWQ8 1189 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 PALB2Q86YC2 1186 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 ERC1Q8IUD2 1116 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 ADGRF4Q8IZF3 695 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 TMEM57Q8N5G2 664 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 MDM1Q8TC05 714 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 ZNF707Q96C28 371 aaPredicted RBP3.75□□□□□ -1.81
CHD1-211ENST00000514344 IGSF21Q96ID5 467 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 ZNF668Q96K58 619 aaPredicted RBP3.75□□□□□ -1.81
CHD1-211ENST00000514344 NELL2Q99435 816 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 VN1R3Q9BXE9 311 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 NACAP1Q9BZK3 213 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 CHRDQ9H2X0 955 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 DNAJB4Q9UDY4 337 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 INPP5FQ9Y2H2 1132 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 MRPS17Q9Y2R5 130 aaKnown RBP3.75□□□□□ -1.81
CHD1-211ENST00000514344 RAXQ9Y2V3 346 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 MRPL11Q9Y3B7 192 aaKnown RBP3.75□□□□□ -1.81
CHD1-211ENST00000514344 RAI2Q9Y5P3 530 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 ITPR3Q14573 2671 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 PTPRQQ9UMZ3 2332 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 GON4LQ3T8J9 2241 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 GPR182O15218 404 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 HOXA2O43364 376 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 GLUD1P00367 558 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 MRPS9P82933 396 aaKnown RBP3.75□□□□□ -1.81
CHD1-211ENST00000514344 RNASELQ05823 741 aaKnown RBP3.75□□□□□ -1.81
CHD1-211ENST00000514344 SCAPQ12770 1279 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 SEMA3FQ13275 785 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 GAS6Q14393 721 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 STOX1Q6ZVD7 989 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 GRASPQ7Z6J2 395 aaPredicted RBP3.75□□□□□ -1.81
CHD1-211ENST00000514344 DDX53Q86TM3 631 aaKnown RBP3.75□□□□□ -1.81
CHD1-211ENST00000514344 KBTBD6Q86V97 674 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 FAM228AQ86W67 206 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 CHCHD4Q8N4Q1 142 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 PIK3R5Q8WYR1 880 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 FGF13Q92913 245 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 PHF20Q9BVI0 1012 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 LMAN1LQ9HAT1 526 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 MRPL17Q9NRX2 175 aaKnown RBP3.75□□□□□ -1.81
CHD1-211ENST00000514344 RBM12Q9NTZ6 932 aaKnown RBP3.75□□□□□ -1.81
CHD1-211ENST00000514344 C2orf42Q9NWW7 574 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 NEUROG3Q9Y4Z2 214 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 SPAARA0A1B0GVQ0 90 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 LNP1A1A4G5 178 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 PATL2C9JE40 543 aaKnown RBP3.75□□□□□ -1.81
CHD1-211ENST00000514344 J3QKU1 62 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 TEX28O15482 410 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 CCDC192P0DO97 292 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 FSHRP23945 695 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 HSD17B4P51659 736 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 SIM1P81133 766 aaPredicted RBP3.75□□□□□ -1.81
CHD1-211ENST00000514344 CREB5Q02930 508 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 SLFN5Q08AF3 891 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 LONP2Q86WA8 852 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 ING5Q8WYH8 240 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 APPBP2Q92624 585 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 ZKSCAN3Q9BRR0 538 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 ADAMTS10Q9H324 1103 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 ELAC1Q9H777 363 aaKnown RBP3.75□□□□□ -1.81
CHD1-211ENST00000514344 EVPLQ92817 2033 aa3.75□□□□□ -1.81
CHD1-211ENST00000514344 SPATA31C2B4DYI2 1134 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 FIBPO43427 364 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 ATP9AO75110 1047 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 VTNP04004 478 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 ADH1AP07327 375 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 ZSCAN20P17040 1043 aaPredicted RBP3.74□□□□□ -1.81
CHD1-211ENST00000514344 ATP5JP18859 108 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 GNAT2P19087 354 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 POLGP54098 1239 aaPredicted RBP3.74□□□□□ -1.81
CHD1-211ENST00000514344 FAM189BP81408 668 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 Q6ZS52 159 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 ECHDC2Q86YB7 292 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 CMASQ8NFW8 434 aaPredicted RBP3.74□□□□□ -1.81
CHD1-211ENST00000514344 LPPQ93052 612 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 INPP4AQ96PE3 977 aaPredicted RBP3.74□□□□□ -1.81
CHD1-211ENST00000514344 NT5C3AQ9H0P0 336 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 CDH7Q9ULB5 785 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.74□□□□□ -1.81
CHD1-211ENST00000514344 DOPEY2Q9Y3R5 2298 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 ATG2BQ96BY7 2078 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 CREBBPQ92793 2442 aa3.74□□□□□ -1.81
CHD1-211ENST00000514344 GSTTP1A0A1W2PQM5 241 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms