RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 NLRP6P59044 892 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 IL1RL1Q01638 556 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 CTDSPL2Q05D32 466 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 PPP2R3AQ06190 1150 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 HSPA14Q0VDF9 509 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 DUS1LQ6P1R4 473 aaKnown RBP7.78□□□□□ -1.16
NIPBL-208ENST00000514335 PRR23CQ6ZRP0 262 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 ZNF554Q86TJ5 538 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 TMEM57Q8N5G2 664 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 USHBP1Q8N6Y0 703 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 TMX3Q96JJ7 454 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 RUNDC3BQ96NL0 473 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 GAS2L1Q99501 681 aaPredicted RBP7.78□□□□□ -1.16
NIPBL-208ENST00000514335 SLF1Q9BQI6 1058 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 PHF20Q9BVI0 1012 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 TRIM5Q9C035 493 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 RHBGQ9H310 441 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 EMC3Q9P0I2 261 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 SH3BGRL2Q9UJC5 107 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 CCDC151A5D8V7 595 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 ST8SIA5O15466 376 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 ZSCAN12O43309 604 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 RIPK2O43353 540 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 SLC3A2P08195 630 aaKnown RBP7.78□□□□□ -1.16
NIPBL-208ENST00000514335 TFPTP0C1Z6 253 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 PSMC2P35998 433 aaKnown RBP7.78□□□□□ -1.16
NIPBL-208ENST00000514335 HADHBP55084 474 aaKnown RBP7.78□□□□□ -1.16
NIPBL-208ENST00000514335 Q3ZCU0 254 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 CDONQ4KMG0 1287 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 ANGPTL8Q6UXH0 198 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 IKBIPQ70UQ0 350 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 VASH1Q7L8A9 365 aaPredicted RBP7.78□□□□□ -1.16
NIPBL-208ENST00000514335 TBC1D1Q86TI0 1168 aaPredicted RBP7.78□□□□□ -1.16
NIPBL-208ENST00000514335 ERICH1Q86X53 443 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 CLVS1Q8IUQ0 354 aaPredicted RBP7.78□□□□□ -1.16
NIPBL-208ENST00000514335 CD302Q8IX05 232 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 CASP10Q92851 521 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 ZNF566Q969W8 418 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 SLC47A1Q96FL8 570 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 SNF8Q96H20 258 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 NLRP4Q96MN2 994 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 CLIC6Q96NY7 704 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 NEK6Q9HC98 313 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 RASAL2Q9UJF2 1139 aa7.78□□□□□ -1.16
NIPBL-208ENST00000514335 MTF2Q9Y483 593 aaPredicted RBP7.78□□□□□ -1.16
NIPBL-208ENST00000514335 FARP1Q9Y4F1 1045 aaPredicted RBP7.78□□□□□ -1.16
NIPBL-208ENST00000514335 VIRMAQ69YN4 1812 aaKnown RBP7.77□□□□□ -1.16
NIPBL-208ENST00000514335 CCDC171Q6TFL3 1326 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 SERTM1A2A2V5 107 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 PCP4L1A6NKN8 68 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 MAP3K13O43283 966 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 SASH3O75995 380 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 UPP2O95045 317 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 LCA5LO95447 670 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 YEATS4O95619 227 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 FGRP09769 529 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 PDHBP11177 359 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 TUBA4AP68366 448 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 TMPRSS15P98073 1019 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 FANCCQ00597 558 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 CSTF3Q12996 717 aaKnown RBP7.77□□□□□ -1.17
NIPBL-208ENST00000514335 FCRLBQ6BAA4 426 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 CAVIN1Q6NZI2 390 aaKnown RBP7.77□□□□□ -1.17
NIPBL-208ENST00000514335 MZT2AQ6P582 158 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 FAM196AQ6ZSG2 479 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 VPS36Q86VN1 386 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 SLC22A9Q8IVM8 553 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 NATD1Q8N6N6 113 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 YME1L1Q96TA2 773 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 LIN28AQ9H9Z2 209 aaKnown RBP7.77□□□□□ -1.17
NIPBL-208ENST00000514335 TRPM5Q9NZQ8 1165 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 TRPS1Q9UHF7 1281 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 ZMIZ1Q9ULJ6 1067 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 MRPL11Q9Y3B7 192 aaKnown RBP7.77□□□□□ -1.17
NIPBL-208ENST00000514335 MYO3BQ8WXR4 1341 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 NOTOA8MTQ0 251 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 MAPK13O15264 365 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 GMNNO75496 209 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 HLA-DRAP01903 254 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 HSPA6P17066 643 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 IL32P24001 234 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 LIFRP42702 1097 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 TRPC3Q13507 836 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 PDE1CQ14123 709 aaPredicted RBP7.77□□□□□ -1.17
NIPBL-208ENST00000514335 MAP3K11Q16584 847 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 PLEKHG4Q58EX7 1191 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 FAM228AQ86W67 206 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 CCDC25Q86WR0 208 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 CBARPQ8N350 705 aaPredicted RBP7.77□□□□□ -1.17
NIPBL-208ENST00000514335 AGR3Q8TD06 166 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 TMIGD2Q96BF3 282 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 DDX50Q9BQ39 737 aaKnown RBP7.77□□□□□ -1.17
NIPBL-208ENST00000514335 CARD14Q9BXL6 1004 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 ABCB6Q9NP58 842 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 FNIP2Q9P278 1114 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 PCOLCE2Q9UKZ9 415 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 HPCAL4Q9UM19 191 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 TNRC6CQ9HCJ0 1690 aaKnown RBP7.77□□□□□ -1.17
NIPBL-208ENST00000514335 NSD3Q9BZ95 1437 aa7.77□□□□□ -1.17
NIPBL-208ENST00000514335 RPAP1Q9BWH6 1393 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms