RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 KRBA1A5PL33 1030 aa22.91■■□□□ 1.26
SQSTM1-215ENST00000514093 TMEM150BA6NC51 233 aa22.91■■□□□ 1.26
SQSTM1-215ENST00000514093 GJA10Q969M2 543 aa22.91■■□□□ 1.26
SQSTM1-215ENST00000514093 LENG9Q96B70 501 aa22.91■■□□□ 1.26
SQSTM1-215ENST00000514093 EMILIN2Q9BXX0 1053 aa22.91■■□□□ 1.26
SQSTM1-215ENST00000514093 FAM105AQ9NUU6 356 aa22.91■■□□□ 1.26
SQSTM1-215ENST00000514093 CA14Q9ULX7 337 aa22.91■■□□□ 1.26
SQSTM1-215ENST00000514093 PIN4Q9Y237 131 aaKnown RBP22.91■■□□□ 1.26
SQSTM1-215ENST00000514093 CACNA1AO00555 2505 aa22.91■■□□□ 1.26
SQSTM1-215ENST00000514093 C2orf16Q68DN1 1984 aa22.9■■□□□ 1.26
SQSTM1-215ENST00000514093 DMXL1Q9Y485 3027 aa22.9■■□□□ 1.26
SQSTM1-215ENST00000514093 DNAH14Q0VDD8 3507 aa22.9■■□□□ 1.26
SQSTM1-215ENST00000514093 GBP2P32456 591 aaPredicted RBP22.9■■□□□ 1.26
SQSTM1-215ENST00000514093 EXOSC10Q01780 885 aaKnown RBP22.9■■□□□ 1.26
SQSTM1-215ENST00000514093 PFKFB3Q16875 520 aaPredicted RBP22.9■■□□□ 1.26
SQSTM1-215ENST00000514093 MTERF2Q49AM1 385 aa22.9■■□□□ 1.26
SQSTM1-215ENST00000514093 ANO2Q9NQ90 1003 aa22.9■■□□□ 1.26
SQSTM1-215ENST00000514093 IGSF9Q9P2J2 1179 aa22.9■■□□□ 1.26
SQSTM1-215ENST00000514093 NAP1L2Q9ULW6 460 aaPredicted RBP22.9■■□□□ 1.26
SQSTM1-215ENST00000514093 WDR81Q562E7 1941 aa22.9■■□□□ 1.26
SQSTM1-215ENST00000514093 KLF18A0A0U1RQI7 1052 aa22.89■■□□□ 1.25
SQSTM1-215ENST00000514093 C2CD2LO14523 706 aa22.89■■□□□ 1.25
SQSTM1-215ENST00000514093 MSH4O15457 936 aa22.89■■□□□ 1.25
SQSTM1-215ENST00000514093 DDHD2O94830 711 aa22.89■■□□□ 1.25
SQSTM1-215ENST00000514093 RFX1P22670 979 aa22.89■■□□□ 1.25
SQSTM1-215ENST00000514093 ADD1P35611 737 aaKnown RBP22.89■■□□□ 1.25
SQSTM1-215ENST00000514093 AFF1P51825 1210 aaKnown RBP22.89■■□□□ 1.25
SQSTM1-215ENST00000514093 TARBP2Q15633 366 aaKnown RBP22.89■■□□□ 1.25
SQSTM1-215ENST00000514093 SPECC1Q5M775 1068 aa22.89■■□□□ 1.25
SQSTM1-215ENST00000514093 DGLUCYQ7Z3D6 616 aa22.89■■□□□ 1.25
SQSTM1-215ENST00000514093 REXO1Q8N1G1 1221 aaKnown RBP22.89■■□□□ 1.25
SQSTM1-215ENST00000514093 ESYT1Q9BSJ8 1104 aa22.89■■□□□ 1.25
SQSTM1-215ENST00000514093 TRAIPQ9BWF2 469 aa22.89■■□□□ 1.25
SQSTM1-215ENST00000514093 ZMYND12Q9H0C1 365 aa22.89■■□□□ 1.25
SQSTM1-215ENST00000514093 WNT16Q9UBV4 365 aa22.89■■□□□ 1.25
SQSTM1-215ENST00000514093 SEPT9Q9UHD8 586 aaPredicted RBP22.89■■□□□ 1.25
SQSTM1-215ENST00000514093 LILRB3O75022 631 aa22.88■■□□□ 1.25
SQSTM1-215ENST00000514093 SKIP12755 728 aa22.88■■□□□ 1.25
SQSTM1-215ENST00000514093 SFPQP23246 707 aaKnown RBP eCLIP22.88■■□□□ 1.25
SQSTM1-215ENST00000514093 CIITAP33076 1130 aa22.88■■□□□ 1.25
SQSTM1-215ENST00000514093 C15orf39Q6ZRI6 1047 aa22.88■■□□□ 1.25
SQSTM1-215ENST00000514093 KSR1Q8IVT5 923 aa22.88■■□□□ 1.25
SQSTM1-215ENST00000514093 UNC45AQ9H3U1 944 aa22.88■■□□□ 1.25
SQSTM1-215ENST00000514093 C6orf50Q9HD87 102 aa22.88■■□□□ 1.25
SQSTM1-215ENST00000514093 MAN1C1Q9NR34 630 aa22.88■■□□□ 1.25
SQSTM1-215ENST00000514093 CCDC195A0A1B0GUA6 201 aa22.87■■□□□ 1.25
SQSTM1-215ENST00000514093 CARNS1A5YM72 827 aa22.87■■□□□ 1.25
SQSTM1-215ENST00000514093 EDIL3O43854 480 aa22.87■■□□□ 1.25
SQSTM1-215ENST00000514093 DCNP07585 359 aaKnown RBP22.87■■□□□ 1.25
SQSTM1-215ENST00000514093 CATSPER4Q7RTX7 472 aa22.87■■□□□ 1.25
SQSTM1-215ENST00000514093 RHPN2Q8IUC4 686 aa22.87■■□□□ 1.25
SQSTM1-215ENST00000514093 SLC44A3Q8N4M1 653 aa22.87■■□□□ 1.25
SQSTM1-215ENST00000514093 ST13P5Q8NFI4 369 aaPredicted RBP22.87■■□□□ 1.25
SQSTM1-215ENST00000514093 HINFPQ9BQA5 517 aa22.87■■□□□ 1.25
SQSTM1-215ENST00000514093 TBC1D17Q9HA65 648 aa22.87■■□□□ 1.25
SQSTM1-215ENST00000514093 MRPL17Q9NRX2 175 aaKnown RBP22.87■■□□□ 1.25
SQSTM1-215ENST00000514093 SUCLA2Q9P2R7 463 aaPredicted RBP22.87■■□□□ 1.25
SQSTM1-215ENST00000514093 ESYT2A0FGR8 921 aa22.86■■□□□ 1.25
SQSTM1-215ENST00000514093 GAS7O60861 476 aa22.86■■□□□ 1.25
SQSTM1-215ENST00000514093 ALDH2P05091 517 aa22.86■■□□□ 1.25
SQSTM1-215ENST00000514093 AK2P54819 239 aa22.86■■□□□ 1.25
SQSTM1-215ENST00000514093 AGMOQ6ZNB7 445 aa22.86■■□□□ 1.25
SQSTM1-215ENST00000514093 DHX32Q7L7V1 743 aaKnown RBP22.86■■□□□ 1.25
SQSTM1-215ENST00000514093 TAS1R1Q7RTX1 841 aa22.86■■□□□ 1.25
SQSTM1-215ENST00000514093 RSPH1Q8WYR4 309 aa22.86■■□□□ 1.25
SQSTM1-215ENST00000514093 NLRP4Q96MN2 994 aa22.86■■□□□ 1.25
SQSTM1-215ENST00000514093 MYADMQ96S97 322 aa22.86■■□□□ 1.25
SQSTM1-215ENST00000514093 CEP89Q96ST8 783 aa22.86■■□□□ 1.25
SQSTM1-215ENST00000514093 SEMA4AQ9H3S1 761 aa22.86■■□□□ 1.25
SQSTM1-215ENST00000514093 FAN1Q9Y2M0 1017 aa22.86■■□□□ 1.25
SQSTM1-215ENST00000514093 PCDHB2Q9Y5E7 798 aa22.86■■□□□ 1.25
SQSTM1-215ENST00000514093 ZNF623O75123 536 aa22.85■■□□□ 1.25
SQSTM1-215ENST00000514093 RFPL2O75678 378 aa22.85■■□□□ 1.25
SQSTM1-215ENST00000514093 DNM2P50570 870 aa22.85■■□□□ 1.25
SQSTM1-215ENST00000514093 CDC42EP1Q00587 391 aa22.85■■□□□ 1.25
SQSTM1-215ENST00000514093 ADCK5Q3MIX3 580 aa22.85■■□□□ 1.25
SQSTM1-215ENST00000514093 DCLK2Q8N568 766 aa22.85■■□□□ 1.25
SQSTM1-215ENST00000514093 URGCPQ8TCY9 931 aa22.85■■□□□ 1.25
SQSTM1-215ENST00000514093 CCDC136Q96JN2 1154 aa22.85■■□□□ 1.25
SQSTM1-215ENST00000514093 TEKT3Q9BXF9 490 aa22.85■■□□□ 1.25
SQSTM1-215ENST00000514093 NIFKQ9BYG3 293 aaKnown RBP22.85■■□□□ 1.25
SQSTM1-215ENST00000514093 INO80BQ9C086 356 aaPredicted RBP22.85■■□□□ 1.25
SQSTM1-215ENST00000514093 WDR6Q9NNW5 1121 aaKnown RBP22.85■■□□□ 1.25
SQSTM1-215ENST00000514093 IGKV6-21A0A0C4DH24 114 aa22.84■■□□□ 1.25
SQSTM1-215ENST00000514093 NRP1O14786 923 aa22.84■■□□□ 1.25
SQSTM1-215ENST00000514093 INPPL1O15357 1258 aa22.84■■□□□ 1.25
SQSTM1-215ENST00000514093 STBD1O95210 358 aa22.84■■□□□ 1.25
SQSTM1-215ENST00000514093 POMCP01189 267 aa22.84■■□□□ 1.25
SQSTM1-215ENST00000514093 SPATA31D3P0C874 917 aa22.84■■□□□ 1.25
SQSTM1-215ENST00000514093 SFNP31947 248 aa22.84■■□□□ 1.25
SQSTM1-215ENST00000514093 RAB27AP51159 221 aa22.84■■□□□ 1.25
SQSTM1-215ENST00000514093 JAK3P52333 1124 aa22.84■■□□□ 1.25
SQSTM1-215ENST00000514093 LRCH2Q5VUJ6 765 aa22.84■■□□□ 1.25
SQSTM1-215ENST00000514093 SPATA31D4Q6ZUB0 917 aa22.84■■□□□ 1.25
SQSTM1-215ENST00000514093 GPR152Q8TDT2 470 aa22.84■■□□□ 1.25
SQSTM1-215ENST00000514093 SLC5A5Q92911 643 aa22.84■■□□□ 1.25
SQSTM1-215ENST00000514093 PGBD4Q96DM1 585 aa22.84■■□□□ 1.25
SQSTM1-215ENST00000514093 FAM193BQ96PV7 902 aaPredicted RBP22.84■■□□□ 1.25
SQSTM1-215ENST00000514093 RIT2Q99578 217 aa22.84■■□□□ 1.25
SQSTM1-215ENST00000514093 FRYLO94915 3013 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms