RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	MMTAG2	Q9BU76	263 aa	Known RBP	11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	LRMDA	Q9H2I8	198 aa		11.97	□□□□□ -0.49
PDCD6-210	ENST00000513582	PHRF1	Q9P1Y6	1649 aa	Known RBP	11.96	□□□□□ -0.49
PDCD6-210	ENST00000513582	RTL9	Q8NET4	1388 aa		11.96	□□□□□ -0.49
PDCD6-210	ENST00000513582	ZNF189	O75820	626 aa	Predicted RBP	11.96	□□□□□ -0.49
PDCD6-210	ENST00000513582	KRT36	O76013	467 aa		11.96	□□□□□ -0.49
PDCD6-210	ENST00000513582	CYP1A1	P04798	512 aa	Predicted RBP	11.96	□□□□□ -0.49
PDCD6-210	ENST00000513582	MECOM	Q03112	1051 aa		11.96	□□□□□ -0.49
PDCD6-210	ENST00000513582	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.96	□□□□□ -0.49
PDCD6-210	ENST00000513582	LRRC57	Q8N9N7	239 aa		11.96	□□□□□ -0.49
PDCD6-210	ENST00000513582	TPCN2	Q8NHX9	752 aa		11.96	□□□□□ -0.49
PDCD6-210	ENST00000513582	SNRNP27	Q8WVK2	155 aa	Known RBP	11.96	□□□□□ -0.49
PDCD6-210	ENST00000513582	NRG4	Q8WWG1	115 aa		11.96	□□□□□ -0.49
PDCD6-210	ENST00000513582	CALML4	Q96GE6	196 aa		11.96	□□□□□ -0.49
PDCD6-210	ENST00000513582	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.96	□□□□□ -0.49
PDCD6-210	ENST00000513582	PKD2L1	Q9P0L9	805 aa		11.96	□□□□□ -0.49
PDCD6-210	ENST00000513582	PRKAG3	Q9UGI9	489 aa		11.96	□□□□□ -0.49
PDCD6-210	ENST00000513582	MAGEA13P	A6NCF6	341 aa		11.96	□□□□□ -0.5
PDCD6-210	ENST00000513582	TRAF5	O00463	557 aa		11.96	□□□□□ -0.5
PDCD6-210	ENST00000513582	CAPN9	O14815	690 aa		11.96	□□□□□ -0.5
PDCD6-210	ENST00000513582	MPP2	Q14168	576 aa		11.96	□□□□□ -0.5
PDCD6-210	ENST00000513582	TXNRD1	Q16881	649 aa		11.96	□□□□□ -0.5
PDCD6-210	ENST00000513582	P3H1	Q32P28	736 aa		11.96	□□□□□ -0.5
PDCD6-210	ENST00000513582	KIAA1755	Q5JYT7	1200 aa		11.96	□□□□□ -0.5
PDCD6-210	ENST00000513582	SRBD1	Q8N5C6	995 aa	Known RBP	11.96	□□□□□ -0.5
PDCD6-210	ENST00000513582	PTPN22	Q9Y2R2	807 aa		11.96	□□□□□ -0.5
PDCD6-210	ENST00000513582	BHMG1	C9JSJ3	638 aa	Predicted RBP	11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	ACTN1	P12814	892 aa		11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	BRAF	P15056	766 aa		11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	SLC16A2	P36021	539 aa		11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	PARP6	Q2NL67	630 aa		11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	DUPD1	Q68J44	220 aa		11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	AADACL2	Q6P093	401 aa		11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	ZDHHC24	Q6UX98	284 aa		11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	JAML	Q86YT9	394 aa		11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	BLID	Q8IZY5	108 aa		11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	RPGR	Q92834	1020 aa	Known RBP	11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	COA7	Q96BR5	231 aa		11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	C18orf8	Q96DM3	657 aa		11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	DDX27	Q96GQ7	796 aa	Known RBP	11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	NT5C3A	Q9H0P0	336 aa		11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	DCLRE1B	Q9H816	532 aa		11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	TCRBV5S4A2T	A0A5A2	114 aa		11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	FAM196B	A6NMK8	535 aa		11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	CES2	O00748	559 aa		11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582		Q4G0T1	1027 aa		11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	CENPP	Q6IPU0	288 aa		11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	ALKBH5	Q6P6C2	394 aa	Known RBP	11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	VSTM1	Q6UX27	236 aa		11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	ZNF571	Q7Z3V5	609 aa	Predicted RBP	11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	ENDOV	Q8N8Q3	282 aa	Known RBP	11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	SEC14L1	Q92503	715 aa		11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	HIC2	Q96JB3	615 aa		11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	FBXO3	Q9UK99	471 aa		11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	RIPK2	O43353	540 aa		11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	SKIV2L2	P42285	1042 aa	Known RBP	11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	SNAP25	P60880	206 aa		11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	ZFYVE27	Q5T4F4	411 aa		11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	CKAP2	Q8WWK9	683 aa		11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	SPOCK2	Q92563	424 aa		11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	11.95	□□□□□ -0.5	8e-8	■■■■□ 26.5
PDCD6-210	ENST00000513582	PPP1R1B	Q9UD71	204 aa	Predicted RBP	11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	CHKB	Q9Y259	395 aa		11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	BZW2	Q9Y6E2	419 aa	Known RBP	11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	LMTK3	Q96Q04	1460 aa		11.95	□□□□□ -0.5
PDCD6-210	ENST00000513582	KLRF2	D3W0D1	207 aa		11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	FUT4	P22083	530 aa		11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	TRAPPC10	P48553	1259 aa		11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	SCNN1D	P51172	638 aa		11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	MPP3	Q13368	585 aa		11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	ITPK1	Q13572	414 aa		11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	DSTYK	Q6XUX3	929 aa		11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	HS2ST1	Q7LGA3	356 aa		11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	TIPIN	Q9BVW5	301 aa		11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	SPATA16	Q9BXB7	569 aa		11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	ARMCX3	Q9UH62	379 aa	Predicted RBP	11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	SMCO2	A6NFE2	343 aa		11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	SLURP2	P0DP57	97 aa		11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	ZNF76	P36508	570 aa		11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	RPL21	P46778	160 aa	Known RBP	11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	POU5F1	Q01860	360 aa	Known RBP	11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	DNAJC3	Q13217	504 aa		11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	EXOC3L4	Q17RC7	722 aa		11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	DCAF17	Q5H9S7	520 aa	Predicted RBP	11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	RNF43	Q68DV7	783 aa		11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	TXNRD3	Q86VQ6	643 aa		11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	OSGEP	Q9NPF4	335 aa		11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	MTRF1L	Q9UGC7	380 aa	Known RBP	11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	ZNF510	Q9Y2H8	683 aa		11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	PARP4	Q9UKK3	1724 aa	Known RBP	11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	C5	P01031	1676 aa		11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582		A6NJR5	290 aa		11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	FGFR1OP	O95684	399 aa	Known RBP	11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	NEK3	P51956	506 aa		11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	RTP1	P59025	263 aa		11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	SEC23A	Q15436	765 aa		11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	ALX1	Q15699	326 aa		11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	LRRC74B	Q6ZQY2	392 aa		11.94	□□□□□ -0.5
PDCD6-210	ENST00000513582	SRRM1	Q8IYB3	904 aa	Known RBP	11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms