RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 SOX7Q9BT81 388 aa3.1□□□□□ -1.91
RNF4-219ENST00000513450 CDH19Q9H159 772 aa3.1□□□□□ -1.91
RNF4-219ENST00000513450 PRDM12Q9H4Q4 367 aa3.1□□□□□ -1.91
RNF4-219ENST00000513450 LUC7LQ9NQ29 371 aaKnown RBP3.1□□□□□ -1.91
RNF4-219ENST00000513450 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.1□□□□□ -1.91
RNF4-219ENST00000513450 EVLQ9UI08 416 aaPredicted RBP3.1□□□□□ -1.91
RNF4-219ENST00000513450 G3BP2Q9UN86 482 aaKnown RBP3.1□□□□□ -1.91
RNF4-219ENST00000513450 LUC7L2Q9Y383 392 aaKnown RBP3.1□□□□□ -1.91
RNF4-219ENST00000513450 EID1Q9Y6B2 187 aa3.1□□□□□ -1.91
RNF4-219ENST00000513450 U2AF1L5P0DN76 240 aaPredicted RBP3.09□□□□□ -1.91
RNF4-219ENST00000513450 OSMP13725 252 aa3.09□□□□□ -1.91
RNF4-219ENST00000513450 ZSCAN20P17040 1043 aaPredicted RBP3.09□□□□□ -1.91
RNF4-219ENST00000513450 CFPP27918 469 aa3.09□□□□□ -1.91
RNF4-219ENST00000513450 CSF2RBP32927 897 aa3.09□□□□□ -1.91
RNF4-219ENST00000513450 KCNC1P48547 511 aa3.09□□□□□ -1.91
RNF4-219ENST00000513450 STAT5BP51692 787 aa3.09□□□□□ -1.91
RNF4-219ENST00000513450 GJA9P57773 515 aa3.09□□□□□ -1.91
RNF4-219ENST00000513450 CDK17Q00537 523 aa3.09□□□□□ -1.91
RNF4-219ENST00000513450 U2AF1Q01081 240 aaKnown RBP eCLIP3.09□□□□□ -1.91
RNF4-219ENST00000513450 PCOLCEQ15113 449 aa3.09□□□□□ -1.91
RNF4-219ENST00000513450 PPP2R5AQ15172 486 aa3.09□□□□□ -1.91
RNF4-219ENST00000513450 VMACQ2NL98 169 aa3.09□□□□□ -1.91
RNF4-219ENST00000513450 MUM1L1Q5H9M0 696 aa3.09□□□□□ -1.91
RNF4-219ENST00000513450 BORAQ6PGQ7 559 aa3.09□□□□□ -1.91
RNF4-219ENST00000513450 FAM180AQ6UWF9 173 aa3.09□□□□□ -1.91
RNF4-219ENST00000513450 BTNL9Q6UXG8 535 aa3.09□□□□□ -1.91
RNF4-219ENST00000513450 GAREM2Q75VX8 874 aa3.09□□□□□ -1.91
RNF4-219ENST00000513450 RALYLQ86SE5 291 aaKnown RBP3.09□□□□□ -1.91
RNF4-219ENST00000513450 LRRC56Q8IYG6 542 aaPredicted RBP3.09□□□□□ -1.91
RNF4-219ENST00000513450 CMTR2Q8IYT2 770 aaKnown RBP3.09□□□□□ -1.91
RNF4-219ENST00000513450 UNC5BQ8IZJ1 945 aa3.09□□□□□ -1.91
RNF4-219ENST00000513450 MBD6Q96DN6 1003 aa3.09□□□□□ -1.91
RNF4-219ENST00000513450 TEKT5Q96M29 485 aa3.09□□□□□ -1.91
RNF4-219ENST00000513450 NUP88Q99567 741 aaPredicted RBP3.09□□□□□ -1.91
RNF4-219ENST00000513450 FDXACB1Q9BRP7 624 aaPredicted RBP3.09□□□□□ -1.91
RNF4-219ENST00000513450 ACE2Q9BYF1 805 aaPredicted RBP3.09□□□□□ -1.91
RNF4-219ENST00000513450 OR10A2Q9H208 303 aa3.09□□□□□ -1.91
RNF4-219ENST00000513450 JADE2Q9NQC1 790 aa3.09□□□□□ -1.91
RNF4-219ENST00000513450 ZIM2Q9NZV7 527 aa3.09□□□□□ -1.91
RNF4-219ENST00000513450 DNAI1Q9UI46 699 aa3.09□□□□□ -1.91
RNF4-219ENST00000513450 MAGEL2Q9UJ55 1249 aa3.09□□□□□ -1.91
RNF4-219ENST00000513450 ZBTB21Q9ULJ3 1066 aa3.09□□□□□ -1.91
RNF4-219ENST00000513450 PNMA8BQ9ULN7 279 aaPredicted RBP3.09□□□□□ -1.91
RNF4-219ENST00000513450 ANKRD6Q9Y2G4 727 aa3.09□□□□□ -1.91
RNF4-219ENST00000513450 GIT1Q9Y2X7 761 aa3.09□□□□□ -1.91
RNF4-219ENST00000513450 ZDHHC9Q9Y397 364 aa3.09□□□□□ -1.91
RNF4-219ENST00000513450 CTDP1Q9Y5B0 961 aaPredicted RBP3.09□□□□□ -1.91
RNF4-219ENST00000513450 A0A1W2PR48 441 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 NOBOXO60393 691 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 NDUFS2O75306 463 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 LY86O95711 162 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 LTA4HP09960 611 aaKnown RBP3.08□□□□□ -1.92
RNF4-219ENST00000513450 CT47B1P0C2W7 299 aaPredicted RBP3.08□□□□□ -1.92
RNF4-219ENST00000513450 ZNF888P0CJ79 500 aaPredicted RBP3.08□□□□□ -1.92
RNF4-219ENST00000513450 GAAP10253 952 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 HNRNPLP14866 589 aaKnown RBP eCLIP3.08□□□□□ -1.92
RNF4-219ENST00000513450 AKAP5P24588 427 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 WASP42768 502 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 MRE11P49959 708 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 SLC16A1P53985 500 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 ADKP55263 362 aaKnown RBP3.08□□□□□ -1.92
RNF4-219ENST00000513450 CD69Q07108 199 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 MGAT5Q09328 741 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 MALLQ13021 153 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 ADAM15Q13444 863 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 NFYCQ13952 458 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 ODF1Q14990 250 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 SURF1Q15526 300 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 ADRM1Q16186 407 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 KRTAP19-4Q3LI73 84 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 ZNF568Q3ZCX4 644 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 C19orf54Q5BKX5 351 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 LCE5AQ5TCM9 118 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 AGBL4Q5VU57 503 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 USP30Q70CQ3 517 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 LARP4Q71RC2 724 aaKnown RBP eCLIP3.08□□□□□ -1.92
RNF4-219ENST00000513450 PLEKHH3Q7Z736 793 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 CLEC14AQ86T13 490 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 C1QL4Q86Z23 238 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 SIAH1Q8IUQ4 282 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 KBTBD2Q8IY47 623 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 RAVER1Q8IY67 606 aaKnown RBP3.08□□□□□ -1.92
RNF4-219ENST00000513450 CHPFQ8IZ52 775 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 GLB1L3Q8NCI6 653 aaPredicted RBP3.08□□□□□ -1.92
RNF4-219ENST00000513450 SLC7A6OSQ96CW6 309 aaPredicted RBP3.08□□□□□ -1.92
RNF4-219ENST00000513450 HSPBAP1Q96EW2 488 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 UIMC1Q96RL1 719 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 RTFDC1Q9BY42 306 aaPredicted RBP3.08□□□□□ -1.92
RNF4-219ENST00000513450 RHOBTB2Q9BYZ6 727 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 CSRNP2Q9H175 543 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 GREM2Q9H772 168 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 C14orf93Q9H972 538 aaKnown RBP3.08□□□□□ -1.92
RNF4-219ENST00000513450 MSL2Q9HCI7 577 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 IP6K2Q9UHH9 426 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 SAP30BPQ9UHR5 308 aaKnown RBP3.08□□□□□ -1.92
RNF4-219ENST00000513450 SCOCQ9UIL1 159 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 ZNF180Q9UJW8 692 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 FAM184BQ9ULE4 1060 aa3.08□□□□□ -1.92
RNF4-219ENST00000513450 PMS2P1A4D2B8 440 aa3.07□□□□□ -1.92
RNF4-219ENST00000513450 KRTAP9-7A8MTY7 169 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms