RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 RWDD2AQ9UIY3 292 aa11.95□□□□□ -0.5
PFDN1-204ENST00000512707 CTNND2Q9UQB3 1225 aa11.95□□□□□ -0.5
PFDN1-204ENST00000512707 MAPK8IP1Q9UQF2 711 aa11.95□□□□□ -0.5
PFDN1-204ENST00000512707 TRIOBPQ9H2D6 2365 aa11.94□□□□□ -0.5
PFDN1-204ENST00000512707 DENND3A2RUS2 1198 aa11.94□□□□□ -0.5
PFDN1-204ENST00000512707 PPP1R3GB7ZBB8 358 aa11.94□□□□□ -0.5
PFDN1-204ENST00000512707 K7ERI5 159 aa11.94□□□□□ -0.5
PFDN1-204ENST00000512707 ARVCFO00192 962 aa11.94□□□□□ -0.5
PFDN1-204ENST00000512707 TLR3O15455 904 aaKnown RBP11.94□□□□□ -0.5
PFDN1-204ENST00000512707 TREHO43280 583 aa11.94□□□□□ -0.5
PFDN1-204ENST00000512707 CALUO43852 315 aaPredicted RBP11.94□□□□□ -0.5
PFDN1-204ENST00000512707 FGFR1OPO95684 399 aaKnown RBP11.94□□□□□ -0.5
PFDN1-204ENST00000512707 SRGAP2CP0DJJ0 459 aa11.94□□□□□ -0.5
PFDN1-204ENST00000512707 BMP6P22004 513 aa11.94□□□□□ -0.5
PFDN1-204ENST00000512707 NMT1P30419 496 aaKnown RBP11.94□□□□□ -0.5
PFDN1-204ENST00000512707 ADAM17P78536 824 aa11.94□□□□□ -0.5
PFDN1-204ENST00000512707 MYL5Q02045 173 aa11.94□□□□□ -0.5
PFDN1-204ENST00000512707 LRRC63Q05C16 580 aa11.94□□□□□ -0.5
PFDN1-204ENST00000512707 NCBP1Q09161 790 aaKnown RBP11.94□□□□□ -0.5
PFDN1-204ENST00000512707 CAPSQ13938 189 aa11.94□□□□□ -0.5
PFDN1-204ENST00000512707 HSP90AA2PQ14568 343 aaPredicted RBP11.94□□□□□ -0.5
PFDN1-204ENST00000512707 KNOP1Q1ED39 458 aaKnown RBP11.94□□□□□ -0.5
PFDN1-204ENST00000512707 BMT2Q1RMZ1 405 aa11.94□□□□□ -0.5
PFDN1-204ENST00000512707 C11orf57Q6ZUT1 292 aaPredicted RBP11.94□□□□□ -0.5
PFDN1-204ENST00000512707 KIAA0319LQ8IZA0 1049 aa11.94□□□□□ -0.5
PFDN1-204ENST00000512707 LINC01465Q8N7H1 131 aa11.94□□□□□ -0.5
PFDN1-204ENST00000512707 TMEM161BQ8NDZ6 487 aa11.94□□□□□ -0.5
PFDN1-204ENST00000512707 NELFBQ8WX92 580 aa11.94□□□□□ -0.5
PFDN1-204ENST00000512707 P2RX5Q93086 422 aa11.94□□□□□ -0.5
PFDN1-204ENST00000512707 BICD1Q96G01 975 aa11.94□□□□□ -0.5
PFDN1-204ENST00000512707 NFKBIZQ9BYH8 718 aa11.94□□□□□ -0.5
PFDN1-204ENST00000512707 INO80BQ9C086 356 aaPredicted RBP11.94□□□□□ -0.5
PFDN1-204ENST00000512707 CGNQ9P2M7 1197 aaKnown RBP11.94□□□□□ -0.5
PFDN1-204ENST00000512707 SCN10AQ9Y5Y9 1956 aa11.94□□□□□ -0.5
PFDN1-204ENST00000512707 GOLGA6L3A6NEY3 463 aa11.93□□□□□ -0.5
PFDN1-204ENST00000512707 IKBKBO14920 756 aa11.93□□□□□ -0.5
PFDN1-204ENST00000512707 CAND2O75155 1236 aa11.93□□□□□ -0.5
PFDN1-204ENST00000512707 VTNP04004 478 aa11.93□□□□□ -0.5
PFDN1-204ENST00000512707 MYBP10242 640 aa11.93□□□□□ -0.5
PFDN1-204ENST00000512707 CCNE1P24864 410 aa11.93□□□□□ -0.5
PFDN1-204ENST00000512707 RPL13P26373 211 aaKnown RBP11.93□□□□□ -0.5
PFDN1-204ENST00000512707 SNRPFP62306 86 aaKnown RBP11.93□□□□□ -0.5
PFDN1-204ENST00000512707 GTF2BQ00403 316 aa11.93□□□□□ -0.5
PFDN1-204ENST00000512707 PTK7Q13308 1070 aa11.93□□□□□ -0.5
PFDN1-204ENST00000512707 DRP2Q13474 957 aa11.93□□□□□ -0.5
PFDN1-204ENST00000512707 PCBP1Q15365 356 aaKnown RBP eCLIP11.93□□□□□ -0.56e-7■■■□□ 15.8
PFDN1-204ENST00000512707 MAPK6Q16659 721 aa11.93□□□□□ -0.5
PFDN1-204ENST00000512707 TMEM132AQ24JP5 1023 aa11.93□□□□□ -0.5
PFDN1-204ENST00000512707 GDF6Q6KF10 455 aaPredicted RBP11.93□□□□□ -0.5
PFDN1-204ENST00000512707 EPM2AIP1Q7L775 607 aaPredicted RBP11.93□□□□□ -0.5
PFDN1-204ENST00000512707 SERINC5Q86VE9 423 aa11.93□□□□□ -0.5
PFDN1-204ENST00000512707 NELFCDQ8IXH7 590 aa11.93□□□□□ -0.5
PFDN1-204ENST00000512707 ZNF507Q8TCN5 953 aa11.93□□□□□ -0.5
PFDN1-204ENST00000512707 SCFD1Q8WVM8 642 aa11.93□□□□□ -0.5
PFDN1-204ENST00000512707 DNAJB3Q8WWF6 145 aa11.93□□□□□ -0.5
PFDN1-204ENST00000512707 BSNDQ8WZ55 320 aa11.93□□□□□ -0.5
PFDN1-204ENST00000512707 GCOM2Q9BZD3 368 aaPredicted RBP11.93□□□□□ -0.5
PFDN1-204ENST00000512707 SENP6Q9GZR1 1112 aaPredicted RBP11.93□□□□□ -0.5
PFDN1-204ENST00000512707 GBP3Q9H0R5 595 aa11.93□□□□□ -0.5
PFDN1-204ENST00000512707 TMEM134Q9H6X4 195 aa11.93□□□□□ -0.5
PFDN1-204ENST00000512707 ARHGAP28Q9P2N2 729 aa11.93□□□□□ -0.5
PFDN1-204ENST00000512707 TBX20Q9UMR3 447 aa11.93□□□□□ -0.5
PFDN1-204ENST00000512707 INO80B-WBP1J3KQ70 363 aa11.92□□□□□ -0.5
PFDN1-204ENST00000512707 PDXKO00764 312 aa11.92□□□□□ -0.5
PFDN1-204ENST00000512707 HNRNPDLO14979 420 aaKnown RBP11.92□□□□□ -0.5
PFDN1-204ENST00000512707 ERLIN2O94905 339 aa11.92□□□□□ -0.5
PFDN1-204ENST00000512707 PRPF6O94906 941 aaKnown RBP11.92□□□□□ -0.5
PFDN1-204ENST00000512707 CD44P16070 742 aaKnown RBP11.92□□□□□ -0.5
PFDN1-204ENST00000512707 EN2P19622 333 aaPredicted RBP11.92□□□□□ -0.5
PFDN1-204ENST00000512707 FXR1P51114 621 aaKnown RBP eCLIP11.92□□□□□ -0.5
PFDN1-204ENST00000512707 GPC3P51654 580 aa11.92□□□□□ -0.5
PFDN1-204ENST00000512707 CASP5P51878 434 aa11.92□□□□□ -0.5
PFDN1-204ENST00000512707 NLRP11P59045 1033 aaKnown RBP11.92□□□□□ -0.5
PFDN1-204ENST00000512707 ZNF200P98182 395 aaPredicted RBP11.92□□□□□ -0.5
PFDN1-204ENST00000512707 ZC2HC1CQ53FD0 456 aaPredicted RBP11.92□□□□□ -0.5
PFDN1-204ENST00000512707 CDCA2Q69YH5 1023 aaPredicted RBP11.92□□□□□ -0.5
PFDN1-204ENST00000512707 FOXR2Q6PJQ5 311 aa11.92□□□□□ -0.5
PFDN1-204ENST00000512707 RUFY4Q6ZNE9 571 aa11.92□□□□□ -0.5
PFDN1-204ENST00000512707 APBB1IPQ7Z5R6 666 aaPredicted RBP11.92□□□□□ -0.5
PFDN1-204ENST00000512707 SRGAP1Q7Z6B7 1085 aa11.92□□□□□ -0.5
PFDN1-204ENST00000512707 MAP4K3Q8IVH8 894 aa11.92□□□□□ -0.5
PFDN1-204ENST00000512707 AOPEPQ8N6M6 819 aa11.92□□□□□ -0.5
PFDN1-204ENST00000512707 SLC43A3Q8NBI5 491 aa11.92□□□□□ -0.5
PFDN1-204ENST00000512707 ANKRD20A12PQ8NF67 263 aa11.92□□□□□ -0.5
PFDN1-204ENST00000512707 ENOX1Q8TC92 643 aaKnown RBP11.92□□□□□ -0.5
PFDN1-204ENST00000512707 NOC3LQ8WTT2 800 aaKnown RBP11.92□□□□□ -0.5
PFDN1-204ENST00000512707 PPP1R13LQ8WUF5 828 aa11.92□□□□□ -0.5
PFDN1-204ENST00000512707 KCNN1Q92952 543 aa11.92□□□□□ -0.5
PFDN1-204ENST00000512707 ZBTB10Q96DT7 871 aa11.92□□□□□ -0.5
PFDN1-204ENST00000512707 FIZ1Q96SL8 496 aa11.92□□□□□ -0.5
PFDN1-204ENST00000512707 KIFC3Q9BVG8 833 aa11.92□□□□□ -0.5
PFDN1-204ENST00000512707 TYW1Q9NV66 732 aaKnown RBP11.92□□□□□ -0.5
PFDN1-204ENST00000512707 PRMT7Q9NVM4 692 aaPredicted RBP11.92□□□□□ -0.5
PFDN1-204ENST00000512707 GINS2Q9Y248 185 aa11.92□□□□□ -0.5
PFDN1-204ENST00000512707 GRIN2DO15399 1336 aa11.91□□□□□ -0.5
PFDN1-204ENST00000512707 KAT6AQ92794 2004 aa11.91□□□□□ -0.5
PFDN1-204ENST00000512707 MYH11P35749 1972 aa11.91□□□□□ -0.5
PFDN1-204ENST00000512707 A0A087WZ62 844 aa11.91□□□□□ -0.5
PFDN1-204ENST00000512707 DCDC2CA8MYV0 355 aa11.91□□□□□ -0.5
PFDN1-204ENST00000512707 STK25O00506 426 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms